BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2755.p (710 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2685 [S] COG3501 Uncharacterized protein conserved in bacteria... 453 e-127 PA0095 [S] COG3501 Uncharacterized protein conserved in bacteria... 431 e-120 RSc1944_1 [S] COG3501 Uncharacterized protein conserved in bacte... 371 e-102 RSp0103_1 [S] COG3501 Uncharacterized protein conserved in bacte... 370 e-102 RSc0958_1 [S] COG3501 Uncharacterized protein conserved in bacte... 366 e-100 >PA2685 [S] COG3501 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 726 Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust. Identities = 284/736 (38%), Positives = 394/736 (53%), Gaps = 93/736 (12%) Query: 16 QHARILRLTFPHNDAP--PSALLVNKLDASEGLSRDFEFTVDLLADNATLELKDLQGKLL 73 QH R++ H D+P P L + +L+ E L R F ++L++ N L L L GK + Sbjct: 42 QHTRLV-----HVDSPLGPEVLQLQRLEGREELGRLFSHELELVSSNPALPLDALLGKPM 96 Query: 74 CVELVRQDGSLRYFTGYVFSFRFVRTDGDIAFYEARLGPWLKYLSLRTNCMLFHGVSLYD 133 + L GS RYF G V G A Y+ L PWL L+ ++C +F + D Sbjct: 97 SLALELPGGSRRYFHGIVARCSQGAGAGQFASYQVTLRPWLWLLTRTSDCRIFQNQKVPD 156 Query: 134 QTRSIFQHYS----------ALPEWEFRRHGEDLPVTEACQFNESDHNYLSRRWEAAGWH 183 + +F+ + EWE+ Q+ E+ +++SR E G + Sbjct: 157 IIKQVFRDLGFSDFEDALSRSYREWEY-----------CVQYRETSFDFVSRLMEQEGIY 205 Query: 184 YAYAHMATGHKLILSDD-STLADPIDGVEIAFQRHA-GSQEEDGIHEWSGERHIVPASVT 241 Y + H H L+LSD P + + + G +E D +W R + P S++ Sbjct: 206 YWFRHEKKRHILVLSDAYGAHHSPAGYTSVPYYPPSLGHRERDHFFDWHMAREVQPGSLS 265 Query: 242 LTSFDFKSPWPKTVDVPTRNNQGLILRKEA------YEYTGAYGFKDRQDGDHLATQRME 295 L +DF+ P + + R+N G R A Y+Y G Y QDG+H A R+E Sbjct: 266 LNDYDFQRPGTR---LEVRSNVG---RAHAAADYPLYDYPGEY--VQSQDGEHYARTRIE 317 Query: 296 EFEHAGKFFQAAGNNRNVVPGRWFRLTGHFDVGSQQEREFLIIEAHHSASNNYHV--NNG 353 + + + G R + G F L+ + + Q RE+L++ A + + N G Sbjct: 318 AIQTQYERVRLRGCARGIGAGHLFHLSNYPRL--DQNREYLVVGAEYRVVQELYETGNGG 375 Query: 354 TAPHYENQIKCIRKVIPWRPGRGFNSVEPKIYGLQTATVVGPKGEEIHTDEYGRVKVQFH 413 +E+++ CI +RP ++ P + G QTA VVGPKGEEI TD+YGRVKV FH Sbjct: 376 GGAQFESELDCIDAGQAFRPLP--STPVPVVRGPQTAVVVGPKGEEIWTDQYGRVKVHFH 433 Query: 414 WDREGELDERSSAWLRVATAWAGSNFGATFIPRIGCEVIVQFLDGNPDRGLITGMVPNAA 473 WDR + +E SS W+RV+ AWAG N+G+ IPRIG EVIV FL+G+PDR +ITG V NA Sbjct: 434 WDRHDQSNENSSCWMRVSQAWAGKNWGSIQIPRIGQEVIVSFLEGDPDRPIITGRVYNAE 493 Query: 474 NMPAWELPANKTQSGILTRSTPKGGYHNANALRFEDMKGQEQLWLHAERNQLTEVEHDED 533 +ELPAN TQSG +RS+ G N N +R ED KG EQL++HAERNQ EVE+DE Sbjct: 494 QTVPYELPANATQSGTKSRSSKGGTPANFNEIRMEDKKGAEQLFIHAERNQDIEVENDES 553 Query: 534 KWVGHDRRKSIDHDETSHIGHDRTETVDNNETITVHNNRTETVDNNETISIGSNRTKTIG 593 WVGHDR K+IDHDET H+ HDRTETVDNNETITVH NR++TVD NET+ IG N Sbjct: 554 HWVGHDRTKTIDHDETVHVKHDRTETVDNNETITVHANRSKTVDRNETVRIGMN------ 607 Query: 594 KNRKDQIGKNWSTHVARMKTETIGMAYMQNVGMGRMENVGLAYNLNVGTVMATMVGLNQM 653 KTETI MA +QNVGMGRMENVGL Y+LNVG +M T+VGLNQ Sbjct: 608 ------------------KTETILMASLQNVGMGRMENVGLGYSLNVGMMMNTVVGLNQS 649 Query: 654 TKVGKTISITAGEELSISVGKAS------------------LRMTADGKIFINGSEIGIE 695 T+V K +++ G+ +SVG + + +TAD +I + + I Sbjct: 650 TQVMKKKTLSVGDSYEVSVGGSDDGSKITLDGQSITLGSQRIELTADREILLRCGQSTIR 709 Query: 696 AS-GPMQLSGKDVDIN 710 + G +++ +VDIN Sbjct: 710 LTPGEIEILSPNVDIN 725 >PA0095 [S] COG3501 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 741 Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust. Identities = 266/749 (35%), Positives = 395/749 (52%), Gaps = 90/749 (12%) Query: 16 QHARILRLTFPHNDAPPSA--LLVNKLDASEGLSRDFEFTVDLLADNATLELKDLQGKLL 73 Q R++R+ D+P A L + +++ E L R F + ++L+++N L L L GK Sbjct: 5 QQTRLVRV-----DSPLGAEVLQLQRMEGREELGRPFAYELELISENPDLPLDGLLGKPA 59 Query: 74 CVELVRQDGSLRYFTGYVFSFRFVRTDGDIAFYEARLGPWLKYLSLRTNCMLFHGVSLYD 133 + L DGS R+F G V + +G A Y+ L PWL L+ ++C +F + D Sbjct: 60 SLALELHDGSRRHFHGIVAACSQGSGNGQFASYQVTLRPWLWLLTRTSDCRIFQNQKVPD 119 Query: 134 QTRSIFQHYS----------ALPEWEFRRHGEDLPVTEACQFNESDHNYLSRRWEAAGWH 183 + +F+ + EWE+ Q+ E+ +++SR E G + Sbjct: 120 IIKQVFRDLGFSDFEDALSRSYREWEY-----------CVQYRETSFDFVSRLMEQEGIY 168 Query: 184 YAYAHMATGHKLILSDD-STLADPIDGVEIAFQRHAGSQEE-DGIHEWSGERHIVPASVT 241 Y + H + H L+LSD P + + + Q E D ++W R + S++ Sbjct: 169 YWFRHEQSRHILVLSDAYGAHQSPPNYASVPYYPPTLEQRERDHFYDWHMAREVQSGSLS 228 Query: 242 LTSFDFKSPWPKTVDVPTRNNQGLILRKEA------YEYTGAYGFKDRQDGDHLATQRME 295 L +DF+ P + + R+N I R A Y+Y G Y QDG+ A R+E Sbjct: 229 LNDYDFQRPGAR---LEVRSN---IARSHAAADYPLYDYPGEY--VQSQDGEQYARTRIE 280 Query: 296 EFEHAGKFFQAAGNNRNVVPGRWFRLTGHFDVGSQQEREFLIIEAHHSASNNYHVNNG-- 353 + + + G R + G F+L+G+ Q RE+L++ A + + G Sbjct: 281 ALQARYERVRLRGRARGLGSGHLFKLSGY--PREDQNREYLVVGAEYRVVQELYETGGGG 338 Query: 354 TAPHYENQIKCIRKVIPWRPGRGFNSVEPKIYGLQTATVVGPKGEEIHTDEYGRVKVQFH 413 +E+++ CI +RP + P + G QTA VVGPKGEEI TD+YGRVKV FH Sbjct: 339 VGAQFESELDCIDAGQAYRPLP--TTPLPIVRGPQTAVVVGPKGEEIWTDQYGRVKVHFH 396 Query: 414 WDREGELDERSSAWLRVATAWAGSNFGATFIPRIGCEVIVQFLDGNPDRGLITGMVPNAA 473 WDR + +E SS W+RV+ AWAG N+G+ IPRIG EVIV FL+G+PDR +ITG V NA Sbjct: 397 WDRHDQSNENSSCWIRVSQAWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYNAE 456 Query: 474 NMPAWELPANKTQSGILTRSTPKGGYHNANALRFEDMKGQEQLWLHAERNQLTEVEHDED 533 +ELPAN TQSG+ +RS+ G N N +R ED KG EQL++HAE+NQ EVE+DE Sbjct: 457 QTVPYELPANATQSGMKSRSSKGGTPANFNEIRMEDKKGAEQLFIHAEKNQDIEVENDET 516 Query: 534 KWVGHDRRKSIDHDETSHIGHDRTETVDNNETITVHNNRTETVDNNETISIGSNRTK--- 590 WVGHDR K+IDHDET H+ HDRTETVDNNETIT+ +RTE V NNE ISIG+NRT+ Sbjct: 517 HWVGHDRTKTIDHDETVHVKHDRTETVDNNETITIGVDRTEKVGNNEKISIGANRTEDVG 576 Query: 591 ---------------------TIGKNRKDQIGKNWSTHVARMKTETIGMAYMQNVGMGRM 629 +IG NR + +G + + + ++E++G ++G R Sbjct: 577 SNETISIGVDRTEKVGSNEKISIGANRTEDVGNDETISIGANRSESVGNNETISIGADRS 636 Query: 630 ENVGLAYNLNVGTVMATMVGLNQMTK----------------VGKTISITAGEELSISVG 673 E+VG +++G +T +G N+ VGK+ ++ AG+ +++ G Sbjct: 637 ESVGANETIDIGGNQSTSIGKNESRSVGQGRDTSVGKDDSLDVGKSFTLNAGDSITLVTG 696 Query: 674 KASLRMTADGKIFINGSEIGIEASGPMQL 702 AS+RM DG I I+G I I+ SG + + Sbjct: 697 AASIRMKKDGSIVISGKNITIDGSGAINV 725 >RSc1944_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 549 Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust. Identities = 225/536 (41%), Positives = 302/536 (56%), Gaps = 38/536 (7%) Query: 20 ILRLTFPHNDAP----------PSALLVNKLDASEGLSRDFEFTVDLLADNATLELKDLQ 69 +L L+FP +DAP P ++V +L+A EGL +DF F + LLAD+A L L D+ Sbjct: 1 MLGLSFPKDDAPTATDPRGRSFPVQMVVERLEAQEGLGQDFRFELTLLADHAGLVLADML 60 Query: 70 GKLLCVELVRQDGSLRYFTGYVFSFRFVRTDGDIAFYEARLGPWLKYLSLRTNCMLFHGV 129 GKLL V LV+ DG+LR+FTG+V F V +D +A Y A L PWL + R N +F Sbjct: 61 GKLLAVSLVKPDGTLRWFTGHVAEFSLVGSDPGVATYRAVLRPWLWFARQRVNNRVFRDR 120 Query: 130 SLYDQTRSIFQHYSALPEWEFRRHGEDLPVTEACQF---NESDHNYLSRRWEAAGWHYAY 186 +LY Q I Q + W++ G+D+P T A Q ES+HNY+ RR EA GW Y Y Sbjct: 121 TLYQQIADILQGHGDWALWQWDVSGDDVPFTMAVQGGGEGESEHNYIHRRLEARGWTYYY 180 Query: 187 AHMATGHKLILSDDSTLADPIDGVE--IAFQRHAGSQEEDGIHEWSGERHIVPASVTLTS 244 H ATGH+L++ D ++ P+DG + I FQ G QEE+ I W+ + V A ++ Sbjct: 181 KHDATGHQLVIIDSNSQCPPVDGNDPRIPFQAEGGPQEENAIQRWTPVQTAVAALFAASA 240 Query: 245 FDFKSPWPKTVDVPTRNNQGLILRKEAYEYTGAYGF-KDRQDGDHLATQRMEEFEHAGKF 303 FDFK P + T+ QG + E +EY G YGF K+ G L R EE E + Sbjct: 241 FDFKRPQARHHTESTQRKQGRVPELETHEYVGHYGFRKEDPTGAALLNLRREEIEAHAQQ 300 Query: 304 FQAAGNNRNVVPGRWFRLTGHF-DVGSQQEREFLIIEAHHSASNNYHVN----------- 351 +QA GNN +VV G WF L GHF + +++ ++LI+ A HSASNNY Sbjct: 301 YQAEGNNSSVVCGGWFYLFGHFSNTEREEDSQYLIVAASHSASNNYPAELGRQGGHTAEP 360 Query: 352 -NGTAPHYENQIKCIRKVIPWRPGRGFNSVEPKIYGLQTATVVGPKG-EEIHTDEYGRVK 409 G Y N+ I++ +PWRPGRG NSVE K+ G QTA VVG G + DE+GR+ Sbjct: 361 LPGRKGEYRNRFTAIKRAVPWRPGRGRNSVEVKVDGHQTARVVGRDGLGAVDVDEHGRIL 420 Query: 410 VQFHWDREGELDERSSAWLRVATAWAGSNFGATFIPRIGCEVIVQFLDGNPDRGLITGMV 469 +QFHWDREG + SA +RVA+ WAG G PR+G EV+V LDGNPD L+ G+V Sbjct: 421 IQFHWDREG----KHSARVRVASNWAGGETGMVSWPRVGSEVLVVALDGNPDHFLVIGVV 476 Query: 470 PNAANMPAWELPANKTQSGILTRS-TPKGGYH---NANALRFEDMKGQEQLWLHAE 521 NA MP W+LP GI +R TP GG +N L +D G+ Q L ++ Sbjct: 477 HNAQRMPPWQLPTQGVLMGIRSRELTPDGGNDPGGRSNLLALDDTAGRIQAQLKSD 532 >RSp0103_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 569 Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust. Identities = 230/539 (42%), Positives = 303/539 (56%), Gaps = 37/539 (6%) Query: 16 QHARILRLTFPHNDAP----------PSALLVNKLDASEGLSRDFEFTVDLLADNATLEL 65 Q R+L L+FP +DAP P ++V +L+A EGL +DF F + LLAD+A L L Sbjct: 18 QSNRLLGLSFPKDDAPTATDLRGRSVPVQMVVERLEAQEGLGQDFRFELTLLADSAGLVL 77 Query: 66 KDLQGKLLCVELVRQDGSLRYFTGYVFSFRFVRTDGDIAFYEARLGPWLKYLSLRTNCML 125 D+ GKLL V LV+ DG+LR+FTG+V F V +D +A Y A L PWL + R N + Sbjct: 78 ADMLGKLLAVSLVKPDGTLRWFTGHVAEFSLVGSDPGVATYRAVLRPWLWFARARINDRV 137 Query: 126 FHGVSLYDQTRSIFQHYSALPEWEFRRHGEDLPVTEACQF---NESDHNYLSRRWEAAGW 182 F SLY Q I Q Y A +W + GED P T A Q ESDHNY+ RR EA G Sbjct: 138 FRDRSLYQQISEILQDYGAWAQWRWAVAGEDAPFTMAVQGGGQGESDHNYIYRRLEARGC 197 Query: 183 HYAYAHMATGHKLILSDDSTLADPIDGVE-IAFQRHAGSQEEDGIHEWSGERHIVPASVT 241 Y H ATGH+L++ D S+ P++G + I FQ G QEE+ I W+ + A Sbjct: 198 ISGYEHDATGHRLVIFDRSSQCPPVEGDQRIPFQAAGGPQEENAIQRWTPVQTAAAALFA 257 Query: 242 LTSFDFKSPWPKTVDVPTRNNQGLILRKEAYEYTGAYGF-KDRQDGDHLATQRMEEFEHA 300 ++FDFK P + T+ QG + EA+EY G YGF K+ G L R EE E Sbjct: 258 ASAFDFKHPQARHQAESTQRKQGSVPELEAHEYAGHYGFPKEDPRGIGLLNLRREEIEAH 317 Query: 301 GKFFQAAGNNRNVVPGRWFRLTGHF-DVGSQQEREFLIIEAHHSASNNYHVNNG-----T 354 + +QA GNN +V G WF L+GHF + ++ ++LI+EA HSASNNY G Sbjct: 318 AEQYQAEGNNASVASGLWFELSGHFSNTERAEDNQYLIVEASHSASNNYLAELGRQGGHE 377 Query: 355 AP-------HYENQIKCIRKVIPWRPGRGFNSVEPKIYGLQTATVVGPKG-EEIHTDEYG 406 AP Y N+ I++ +PWRPGRG NS++ K+ Q+ATVV G + DE+G Sbjct: 378 APLFAGRKGEYRNRFIAIKRAVPWRPGRGRNSIDVKVERHQSATVVAAGGLGALDVDEHG 437 Query: 407 RVKVQFHWDREGELDERSSAWLRVATAWAGSNFGATFIPRIGCEVIVQFLDGNPDRGLIT 466 RV ++FHWDREG + SA +RVA+ WAG G PR G EV+V LDGNPD LI Sbjct: 438 RVLIRFHWDREG----KYSARVRVASNWAGGETGMVSWPRAGSEVLVIALDGNPDHFLII 493 Query: 467 GMVPNAANMPAWELPANKTQSGILTRS-TPKGGYH---NANALRFEDMKGQEQLWLHAE 521 G V NA MP W+LPA GI +R TP GG ++N L +D G+ Q L ++ Sbjct: 494 GGVHNAHRMPPWQLPAQGALMGIRSRELTPDGGNDPGGSSNHLVLDDTAGRIQAQLKSD 552 >RSc0958_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 591 Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust. Identities = 224/547 (40%), Positives = 299/547 (54%), Gaps = 37/547 (6%) Query: 8 LEKLLSDYQHARILRLTFPHNDAP----------PSALLVNKLDASEGLSRDFEFTVDLL 57 L +L Q R+L L+FP +D P P ++V +L+A EGL DF F + LL Sbjct: 32 LHGILFFQQSNRLLGLSFPKDDTPTATDPRGRSFPVQMVVERLEAQEGLGEDFRFELTLL 91 Query: 58 ADNATLELKDLQGKLLCVELVRQDGSLRYFTGYVFSFRFVRTDGDIAFYEARLGPWLKYL 117 AD+A L L D+ GKLL V LV+ DG+LR+FTG+V F V +D +A Y A L PWL + Sbjct: 92 ADHAGLVLADMLGKLLAVSLVKPDGTLRWFTGHVSEFSLVGSDPGVATYRAVLRPWLWFA 151 Query: 118 SLRTNCMLFHGVSLYDQTRSIFQHYSALPEWEFRRHGEDLPVTEACQF---NESDHNYLS 174 R N +F SLY+Q I Q Y A +W + G D P T A Q ESDHNY+ Sbjct: 152 LHRINNRVFRDRSLYEQIAEILQDYGAWAQWRWDASGADAPFTMAVQGGGQGESDHNYIH 211 Query: 175 RRWEAAGWHYAYAHMATGHKLILSDDSTLADPIDGV-EIAFQRHAGSQEEDGIHEWSGER 233 RR EA GW Y Y H ATGH+L++ D ++ + G I FQ G QEE+ I W+ + Sbjct: 212 RRLEAQGWTYRYEHDATGHRLVIFDSNSQCPRVAGDHRIPFQAAGGPQEENAIQRWTPVQ 271 Query: 234 HIVPASVTLTSFDFKSPWPKTVDVPTRNNQGLILRKEAYEYTGAYGF-KDRQDGDHLATQ 292 A ++FDFK + T QG + EA+EY G YGF K+ G L Sbjct: 272 TAAAALFAASAFDFKQSQARHQAESTLRKQGRVPELEAHEYVGHYGFTKEDPTGAALLNL 331 Query: 293 RMEEFEHAGKFFQAAGNNRNVVPGRWFRLTGHF-DVGSQQEREFLIIEAHHSASNNYHVN 351 R EE E + +QA GNN +V G WF L+ HF + +++ ++LI+ A HSASNNY Sbjct: 332 RREEVEAHAEQYQAEGNNSSVAAGCWFELSEHFSNTEREEDSQYLIVAASHSASNNYLAE 391 Query: 352 ------------NGTAPHYENQIKCIRKVIPWRPGRGFNSVEPKIYGLQTATVVGPKG-E 398 G Y N+ I++ +PWRPGRG NSV+ ++YG QTATV+ G Sbjct: 392 LGRQGGREAQPLAGRKGEYRNRFTAIKRAVPWRPGRGRNSVDVRVYGQQTATVLAAGGLG 451 Query: 399 EIHTDEYGRVKVQFHWDREGELDERSSAWLRVATAWAGSNFGATFIPRIGCEVIVQFLDG 458 + DE+GR+ ++FHWDREG+ R +RVA+ WAG G PR G EV+V LDG Sbjct: 452 ALDVDEHGRILIRFHWDREGKFSAR----VRVASNWAGGETGMVSWPRAGSEVLVVALDG 507 Query: 459 NPDRGLITGMVPNAANMPAWELPANKTQSGILTRS-TPKGGYH---NANALRFEDMKGQE 514 NPD L+ G+V NA MP W+LPA GI +R TP GG +N L +D G+ Sbjct: 508 NPDHFLVIGVVHNARRMPPWQLPAQGALMGIRSRELTPDGGNDPGGRSNQLVLDDTAGKI 567 Query: 515 QLWLHAE 521 Q L ++ Sbjct: 568 QAQLKSD 574