BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2716.p         (164 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0203 [I] COG1607 Acyl-CoA hydrolase Rso Ralstonia solanacearum     251   7e-67
PA5519 [I] COG1607 Acyl-CoA hydrolase Pae Pseudomonas aeruginosa      234   6e-62
PA2693 [I] COG1607 Acyl-CoA hydrolase Pae Pseudomonas aeruginosa      226   1e-59
SMb21634 [I] COG1607 Acyl-CoA hydrolase Sme Sinorhizobium meliloti    202   2e-52
NMB1482 [I] COG1607 Acyl-CoA hydrolase Nme Neisseria meningitidi...   200   1e-51

>RSp0203 [I] COG1607 Acyl-CoA hydrolase Rso Ralstonia solanacearum
          Length = 164

 Score =  251 bits (640), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 118/164 (71%), Positives = 136/164 (82%)

Query: 1   MDLPSHQLTMTVLMTPDMANFAGNVHGGTILKLLDQVAYACGSRYAGQYVVTLSVDQVMF 60
           M+  SHQL+MTVLMTPDMANF+GNVHGG ILKLLDQVAYAC SRYAG+YVVTLSVDQV+F
Sbjct: 1   MNTQSHQLSMTVLMTPDMANFSGNVHGGHILKLLDQVAYACASRYAGRYVVTLSVDQVVF 60

Query: 61  RQPIHVGELVTFLASVNHTGKSSMEIGIKVVAENIRTQETRHVNSCFFTMVAVDDQRKPI 120
           RQPIHVGELVTFLASVN+TG++SMEIGIKVV ENIR +  RH NSC+FTMVAVDD  KP 
Sbjct: 61  RQPIHVGELVTFLASVNYTGRTSMEIGIKVVTENIRNKVVRHTNSCYFTMVAVDDDGKPA 120

Query: 121 PVPPLRPFSQEEKRRFDAAVIRKSLRQELARRYEEFKPGVEKAN 164
            VPPL P   +EK RF+AA  R++LRQE+ +R++  K     AN
Sbjct: 121 DVPPLTPTDAQEKERFEAAQQRRALRQEMEQRHKAIKAAYSAAN 164


>PA5519 [I] COG1607 Acyl-CoA hydrolase Pae Pseudomonas aeruginosa
          Length = 188

 Score =  234 bits (597), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 107/153 (69%), Positives = 130/153 (84%)

Query: 5   SHQLTMTVLMTPDMANFAGNVHGGTILKLLDQVAYACGSRYAGQYVVTLSVDQVMFRQPI 64
           ++QL+MTVLMTPDMANF+GNVHGGT+LK LD+VAYAC SRYAG+YVVTLSVDQV+FR+P+
Sbjct: 33  NNQLSMTVLMTPDMANFSGNVHGGTLLKYLDEVAYACASRYAGRYVVTLSVDQVIFREPV 92

Query: 65  HVGELVTFLASVNHTGKSSMEIGIKVVAENIRTQETRHVNSCFFTMVAVDDQRKPIPVPP 124
           HVGELVTFLASVN+TG++SMEIG+KV+ ENIR Q  RH NSCFFTMVA+DD+RKP+ V P
Sbjct: 93  HVGELVTFLASVNYTGRTSMEIGVKVITENIREQSVRHTNSCFFTMVALDDERKPVAVRP 152

Query: 125 LRPFSQEEKRRFDAAVIRKSLRQELARRYEEFK 157
           L   + E+KRRF  A  R+ LR EL  RY+  +
Sbjct: 153 LELETAEQKRRFAQAQQRRQLRAELEARYQAIR 185


>PA2693 [I] COG1607 Acyl-CoA hydrolase Pae Pseudomonas aeruginosa
          Length = 166

 Score =  226 bits (577), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 104/163 (63%), Positives = 133/163 (81%)

Query: 1   MDLPSHQLTMTVLMTPDMANFAGNVHGGTILKLLDQVAYACGSRYAGQYVVTLSVDQVMF 60
           M+  S+QLTM+VLMTPD ANF+GNVHGG +LKLLD+VA+AC  RYAG+YVVTLSVDQV+F
Sbjct: 1   MEPGSYQLTMSVLMTPDKANFSGNVHGGALLKLLDEVAFACAKRYAGRYVVTLSVDQVIF 60

Query: 61  RQPIHVGELVTFLASVNHTGKSSMEIGIKVVAENIRTQETRHVNSCFFTMVAVDDQRKPI 120
           R+PIHVGELVTFLASVN+TG++SME+G+KV+ ENI  +  RH NSCFFTMVA+DDQR+P+
Sbjct: 61  REPIHVGELVTFLASVNYTGRTSMEVGVKVMTENIHERTVRHTNSCFFTMVAMDDQRRPV 120

Query: 121 PVPPLRPFSQEEKRRFDAAVIRKSLRQELARRYEEFKPGVEKA 163
            V PL P +  EKRR+  A+ R+  R+ +  RY+E +  V+ A
Sbjct: 121 AVRPLEPETAIEKRRYAQALARREQRKLMELRYQEIREQVDHA 163


>SMb21634 [I] COG1607 Acyl-CoA hydrolase Sme Sinorhizobium meliloti
          Length = 167

 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 91/148 (61%), Positives = 117/148 (79%)

Query: 5   SHQLTMTVLMTPDMANFAGNVHGGTILKLLDQVAYACGSRYAGQYVVTLSVDQVMFRQPI 64
           +  L MTVLMTPDMANF+G VHGG +L LLD+VA++C SR++ QY VTLSVDQV+F++PI
Sbjct: 7   TRHLVMTVLMTPDMANFSGKVHGGALLNLLDRVAFSCASRFSKQYAVTLSVDQVIFKEPI 66

Query: 65  HVGELVTFLASVNHTGKSSMEIGIKVVAENIRTQETRHVNSCFFTMVAVDDQRKPIPVPP 124
           HVGELVTF A++N+ G++SME+GI+V AENIR    RH NSC+FTMVAVDD  +P+ VP 
Sbjct: 67  HVGELVTFRAAINYAGRTSMEVGIRVEAENIRAGTRRHTNSCYFTMVAVDDAGRPVTVPE 126

Query: 125 LRPFSQEEKRRFDAAVIRKSLRQELARR 152
             P +  EKRR  AA +R++LR+E A R
Sbjct: 127 YHPETATEKRRHQAAELRRTLRREFAHR 154


>NMB1482 [I] COG1607 Acyl-CoA hydrolase Nme Neisseria meningitidis MC58
          Length = 160

 Score =  200 bits (508), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 91/143 (63%), Positives = 116/143 (81%), Gaps = 1/143 (0%)

Query: 3   LPSHQLTMTVLMTPDMANFAGNVHGGTILKLLDQVAYACGSRYAGQYVVTLSVDQVMFRQ 62
           LPSH+L M+ LM PD ANF+GNVHGG +L LLDQVAY+C SRY+G Y VTLSVD+V+F++
Sbjct: 7   LPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYSCASRYSGNYCVTLSVDKVLFKE 66

Query: 63  PIHVGELVTFLASVNHTGKSSMEIGIKVVAENIRTQETRHVNSCFFTMVAVDDQRKPIPV 122
           PIHVG+LVTF ASVN+TG++SMEIGI+V A+NIRT E RH NSC+FTMVAV D  KP+PV
Sbjct: 67  PIHVGDLVTFYASVNYTGRTSMEIGIRVEAQNIRTGEIRHTNSCYFTMVAVKDG-KPVPV 125

Query: 123 PPLRPFSQEEKRRFDAAVIRKSL 145
           PPL   +  ++ R++ A  R+ +
Sbjct: 126 PPLEILTDRQRCRYEKAKKRRDI 148