BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2670.p         (78 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3079_1 [T] COG2202 FOG Rso Ralstonia solanacearum                   30   1.7  
Z2579 [R] COG3302 DMSO reductase anchor subunit EcZ Escherichia ...    28   4.6  
ECs2296 [R] COG3302 DMSO reductase anchor subunit Ecs Escherichi...    28   4.6  
ynfH [R] COG3302 DMSO reductase anchor subunit Eco Escherichia c...    28   4.9  

>RSc3079_1 [T] COG2202 FOG Rso Ralstonia solanacearum
          Length = 374

 Score = 29.6 bits (65), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 13  RYLAVNTIFYAIGGVLLKLLTLGRYPRWLPLRQGHWRQQAQDFELVALLGLL-ATVALVI 71
           RY+AVN  F  + G   + L LGR P  L  R  H   +AQD +  A      A  AL I
Sbjct: 127 RYVAVNAAFCHLFGQPREAL-LGRTPAHLGWRCAHTAARAQDIDRRATAASQGACEALTI 185

Query: 72  LAA 74
            AA
Sbjct: 186 TAA 188


>Z2579 [R] COG3302 DMSO reductase anchor subunit EcZ Escherichia coli
           O157:H7 EDL933
          Length = 284

 Score = 28.1 bits (61), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 3   NLIGAALGLLRYLAVNTIFYAIGGVLLKLLTLGRYPR 39
           N IGA+ GL   +A  +IF+A+GG+   +  +G+ P+
Sbjct: 76  NRIGAS-GLSNEIAAGSIFFAVGGLWWLVAVIGKMPQ 111


>ECs2296 [R] COG3302 DMSO reductase anchor subunit Ecs Escherichia coli
           O157:H7
          Length = 284

 Score = 28.1 bits (61), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 3   NLIGAALGLLRYLAVNTIFYAIGGVLLKLLTLGRYPR 39
           N IGA+ GL   +A  +IF+A+GG+   +  +G+ P+
Sbjct: 76  NRIGAS-GLSNEIAAGSIFFAVGGLWWLVAVIGKMPQ 111


>ynfH [R] COG3302 DMSO reductase anchor subunit Eco Escherichia coli K12
          Length = 284

 Score = 28.1 bits (61), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 3   NLIGAALGLLRYLAVNTIFYAIGGVLLKLLTLGRYPR 39
           N IGA+ GL   +A  +IF+A+GG+   +  +G+ P+
Sbjct: 76  NRIGAS-GLSNEIAAGSIFFAVGGLWWLVAVIGKMPQ 111