BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2644.p (292 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC3172 [C] COG0584 Glycerophosphoryl diester phosphodiesterase C... 147 4e-35 AGl598 [C] COG0584 Glycerophosphoryl diester phosphodiesterase A... 145 8e-35 mlr8455 [C] COG0584 Glycerophosphoryl diester phosphodiesterase ... 99 1e-20 L18600_2 [C] COG0584 Glycerophosphoryl diester phosphodiesterase... 87 5e-17 BH3700 [C] COG0584 Glycerophosphoryl diester phosphodiesterase B... 82 2e-15 >CC3172 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Ccr Caulobacter vibrioides Length = 295 Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 113/298 (37%), Positives = 153/298 (51%), Gaps = 56/298 (18%) Query: 23 LVSSHRSCW---------TETSENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDETV 73 +V +HR C + ENSL+ ++RCI G+D+ E DVR T+DG LV+MHD +V Sbjct: 1 MVVAHRGCHAAAPDHGLASSAPENSLEALQRCIDIGVDMVETDVRRTQDGVLVIMHDPSV 60 Query: 74 DRTTDGQGAVADLSLAQIRSLRLRAHGGGHKAALTARRIPTLQEALAAARGRILLNLDVK 133 DRTTDG G VA L+LAQI++LRL GG +A PTL+ L AARGR+L+NL +K Sbjct: 61 DRTTDGGGLVAKLTLAQIQALRL---DGGDEAP------PTLEAFLRAARGRVLVNLHLK 111 Query: 134 AADIGPMVAAIMET----DTAHDVLLNINEGVDPQQVAWARSLGIAVQTLYFDEK----- 184 GP A E D + VL D IA Q LY D Sbjct: 112 ----GPFAAQAAEVARRADASDWVLFKARAKTDMSP--------IADQPLYRDVAFMPMV 159 Query: 185 -TGASGRQAQLQAMARQEPTVLQPIFHDPAV---------VDAARQAVQGRPVRLLVNTM 234 GA+ QL + ++ + ++PI PAV + R A + VR+ NT+ Sbjct: 160 GEGAARDAGQLGQVITRQASGIRPI---PAVETRRMGAQGFASVRDAAEAARVRVWANTL 216 Query: 235 ALDIDSGRPMNLAGPYLDTVALQHPEQVWGKLIENGVSIIQTDEPQRLLAWLKRKKLR 292 + + G D AL+ P+ WG+LI+ GVSIIQTD P RLL +LK ++LR Sbjct: 217 GMS----SWKSFFGVSGDRRALRDPDTSWGRLIDQGVSIIQTDHPARLLGYLKSRRLR 270 >AGl598 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 306 Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 145/271 (53%), Gaps = 17/271 (6%) Query: 22 VLVSSHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDETVDRTTDGQG 81 +L +HR WT T+ENSL +R +A G+++ EID + T DG LV++HDET+DRTT G+G Sbjct: 36 ILTIAHRGFWTATAENSLASVRAAVAAGVEMIEIDTQATADGRLVVIHDETLDRTTTGKG 95 Query: 82 AVADLSLAQIRSLRLRAHGGGHKAALTARRIPTLQEALAAARGRILLNLDVKAA-DIGPM 140 V+ L +R+ +L+A GG A +T +PTL+E L ARGRI +N+D K D+ + Sbjct: 96 TVSALPFEVVRAAKLKAGAGGDGADVTDECVPTLEEVLEEARGRITVNIDTKFTRDLPQV 155 Query: 141 VAAIMETDTAHDVLLNINEGVDPQ----QVAWARSLGIAVQTLYFDEKTGASGRQAQLQA 196 + ++ VL+ + VDP+ +V + G F + G L+ Sbjct: 156 METVLRLGVEDQVLVKTD--VDPEAERFEVLGSHWFGRIPHMPMFPVRKGKFAE--DLRR 211 Query: 197 MARQEPTVLQPIFHDPAVVDAARQAVQGRPVRLLVNTMALDIDSGRPMNLAGPYLDTVAL 256 + + +++ F D A + R ++ + +RL +N+ LD+ N DT AL Sbjct: 212 IEALKAPMIEVKFTDIADLAEGRAEMERQNIRLWINS--LDVSHCLDFN------DTRAL 263 Query: 257 QHPEQVWGKLIENGVSIIQTDEPQRLLAWLK 287 +PE VWG L E G IQTDE + AWLK Sbjct: 264 SNPEAVWGALAEAGTGAIQTDEVEAFTAWLK 294 >mlr8455 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Mlo Mesorhizobium loti Length = 407 Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 90/318 (28%), Positives = 142/318 (44%), Gaps = 76/318 (23%) Query: 22 VLVSSHRSCW-----TETSENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDETVDRT 76 V+V++HR+ T +ENSL + IA G +I E+D+R ++DG V+MHD +DRT Sbjct: 100 VMVAAHRAGSMQAGKTLYAENSLAAVEGSIAMGAEIVEVDIRRSKDGEFVVMHDSWLDRT 159 Query: 77 TDGQGAVADLSLAQIRSLRLRAHGGGHKAALTARRIPTLQEALAAARGRILLNLDVKAAD 136 T +G V +LA++++ RL G A+T R+ TL+E L A R RIL+NLD K + Sbjct: 160 TTCKGEVVKHTLAELKTCRLVIEG---TRAVTDERVSTLREMLLATRDRILINLDNK-LE 215 Query: 137 IGPMVAAIMETDTAHDVLLNINEGVDPQQVAWARSLGIAVQTLYFD---EKTGASGRQAQ 193 +G + P +A AR LG+A Q + + +T + +A Sbjct: 216 VGDL----------------------PGMIAVARDLGMADQVIVKENLWNQTRIATVKAA 253 Query: 194 LQAMA---RQEPTVLQPIFHDPAVVDAARQAVQGRPVRLL-----VNTMALDIDSGRPM- 244 + A+ + P + HD + A R + L+ T+ ++G P+ Sbjct: 254 MAAIGGGVQFMPIIADDAVHDAGFAETVDHAFSPRAIELINWRAGAQTLT---ETGGPLF 310 Query: 245 ----------------------------NLAGPYLDTVALQH--PEQVWGKLIENGVSII 274 LAG D +A+Q P + WG ++ G +II Sbjct: 311 STRMRAAAVRGNWHIWADTYAIVNKPGGFLAGGRGDELAVQASLPREAWGFWVDRGATII 370 Query: 275 QTDEPQRLLAWLKRKKLR 292 QTDEP+ + WL R Sbjct: 371 QTDEPKAAIDWLAANAYR 388 >L18600_2 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Lla Lactococcus lactis Length = 227 Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 8/119 (6%) Query: 22 VLVSSHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDETVDRTTDGQG 81 +L+ +HR TE ENS++ + + E D++TT DG V MHD TVDRTT+G G Sbjct: 3 ILLVNHRGNHTEFPENSVESVLSAKYSAV---ETDIQTTSDGQWVNMHDATVDRTTNGHG 59 Query: 82 AVADLSLAQIRSLRLRAHGGGHKAALTARRIPTLQEALAAARGRILLNL-DVKAADIGP 139 AVADL+LAQI++L L+ + G +T ++PTL + LAA + + ++ L ++K A P Sbjct: 60 AVADLTLAQIQNLYLKNNSG----QITQYKVPTLDQYLAACKQKGVIPLIEIKQATATP 114 >BH3700 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Bha Bacillus halodurans Length = 284 Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 3/114 (2%) Query: 26 SHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDETVDRTTDGQGAVAD 85 +HR EN++ ++ +D E DV T+DG LVLMHD TVDRTT+G G V+D Sbjct: 43 AHRGASGHAPENTMAAFQKGFDMKVDYIEFDVHMTKDGELVLMHDLTVDRTTNGHGYVSD 102 Query: 86 LSLAQIRSLRLRAHGGGHKAALTARRIPTLQEALAAARGRILLNLDVKAADIGP 139 L+L +I+ G ++PT +E L RG++ L +++K+ + P Sbjct: 103 LTLDEIKQFDA---GSWFHEDFVGEKVPTFEETLDVFRGKVGLLIELKSPERYP 153