BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2622.p         (165 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1471 [S] COG3045 Uncharacterized protein conserved in bacteri...   193   1e-49
PA4564 [S] COG3045 Uncharacterized protein conserved in bacteria...   186   2e-47
YPO0457 [S] COG3045 Uncharacterized protein conserved in bacteri...   160   2e-39
STM4587 [S] COG3045 Uncharacterized protein conserved in bacteri...   156   2e-38
creA [S] COG3045 Uncharacterized protein conserved in bacteria E...   154   8e-38

>RSc1471 [S] COG3045 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 169

 Score =  193 bits (490), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 98/155 (63%), Positives = 123/155 (79%), Gaps = 3/155 (1%)

Query: 12  ILSICTM-AAIVPHAASAEELADVSTAFRWLGKNDRVVIEAYDDPKVVGVTCYVSRARTG 70
           ILSI  + AA++   ASAE++  V+T FR  G +D++VIEA+DDP V GVTCYVSRARTG
Sbjct: 17  ILSIALLTAALLSTTASAEDIGSVNTNFRITG-SDKIVIEAFDDPLVGGVTCYVSRARTG 75

Query: 71  GVKGTVGLAEDKSEASIACRQVAPSIQFQGKLPVQEDVFSERMSILFKRLHVVRVVDAKR 130
           G+KGT+G+AED SEAS+ACRQV   I+F   LP Q+D+F++R+S++FK LHVVR VD KR
Sbjct: 76  GIKGTLGVAEDVSEASVACRQVG-EIRFVKPLPQQDDMFTQRLSLIFKTLHVVRTVDRKR 134

Query: 131 NTLVYLTYSDKLIDGSPMNAVTAVPVAPATPIPVK 165
           N LVYLTYSDK+I GSP N+VTAVP+    PIPVK
Sbjct: 135 NVLVYLTYSDKVISGSPKNSVTAVPIPAGQPIPVK 169


>PA4564 [S] COG3045 Uncharacterized protein conserved in bacteria Pae
           Pseudomonas aeruginosa
          Length = 154

 Score =  186 bits (472), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 84/130 (64%), Positives = 108/130 (83%), Gaps = 1/130 (0%)

Query: 29  EELADVSTAFRWLGKNDRVVIEAYDDPKVVGVTCYVSRARTGGVKGTVGLAEDKSEASIA 88
           EE+ +VST F+W+G ND++V+EA+DDPKV GVTCY+SRA+TGGVKG +GLAED++EASIA
Sbjct: 21  EEIGEVSTVFKWVGPNDKIVVEAFDDPKVQGVTCYLSRAKTGGVKGGLGLAEDRAEASIA 80

Query: 89  CRQVAPSIQFQGKLPVQEDVFSERMSILFKRLHVVRVVDAKRNTLVYLTYSDKLIDGSPM 148
           CRQV P IQF G+L   E+VF +R S++FK + VVR  D KRN LVYL YSD++I+GSP 
Sbjct: 81  CRQVGP-IQFSGELKDGEEVFKQRTSLVFKSMQVVRFFDRKRNALVYLVYSDRVIEGSPQ 139

Query: 149 NAVTAVPVAP 158
           NAVTA+P+ P
Sbjct: 140 NAVTAIPLMP 149


>YPO0457 [S] COG3045 Uncharacterized protein conserved in bacteria Ype
           Yersinia pestis
          Length = 155

 Score =  160 bits (404), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 77/155 (49%), Positives = 111/155 (71%), Gaps = 11/155 (7%)

Query: 8   LVGAILSICTMAAIVPHAASAEELADVSTAFRWLGKNDRVVIEAYDDPKVVGVTCYVSRA 67
            +G +LS+  + A       AEE+  V T F+ LG + ++VIEA+DDP V  VTCY+SRA
Sbjct: 7   FLGCLLSLGAITA------QAEEIGSVDTVFKLLGPDHKIVIEAFDDPDVKNVTCYISRA 60

Query: 68  RTGGVKGTVGLAEDKSEASIACRQVAPSIQFQGKLPVQED----VFSERMSILFKRLHVV 123
           +TGG+KG +GLAED ++A+I+C+QV P I+   K+  ++     VF +R S++FK+L VV
Sbjct: 61  KTGGIKGGLGLAEDTADAAISCQQVGP-IELSDKIKNKKSEGAVVFQKRTSLVFKKLQVV 119

Query: 124 RVVDAKRNTLVYLTYSDKLIDGSPMNAVTAVPVAP 158
           R  D KRN+LVYLTYSD+++DGSP NA++AVP+ P
Sbjct: 120 RFYDPKRNSLVYLTYSDRIVDGSPKNAISAVPIMP 154


>STM4587 [S] COG3045 Uncharacterized protein conserved in bacteria Sty
           Salmonella typhimurium LT2
          Length = 157

 Score =  156 bits (394), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/138 (53%), Positives = 99/138 (71%), Gaps = 3/138 (2%)

Query: 24  HAASAEELADVSTAFRWLGKNDRVVIEAYDDPKVVGVTCYVSRARTGGVKGTVGLAEDKS 83
            +A AE++  V T F+  G + ++V+EA+DDP V  VTCYVSRA+TGG+KG +GLAED S
Sbjct: 17  QSARAEQIGSVDTVFKMFGPDHKIVVEAFDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTS 76

Query: 84  EASIACRQVAP---SIQFQGKLPVQEDVFSERMSILFKRLHVVRVVDAKRNTLVYLTYSD 140
           +A+I+C+QV P   S + +      E VF +R S++FK L VVR  D KRNTL YL YSD
Sbjct: 77  DAAISCQQVGPIELSDKIKNGKAQGEVVFKKRTSLIFKSLQVVRFYDEKRNTLAYLAYSD 136

Query: 141 KLIDGSPMNAVTAVPVAP 158
           K++DGSP NA++AVPV P
Sbjct: 137 KVVDGSPKNAISAVPVMP 154


>creA [S] COG3045 Uncharacterized protein conserved in bacteria Eco
           Escherichia coli K12
          Length = 157

 Score =  154 bits (389), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 74/136 (54%), Positives = 99/136 (72%), Gaps = 3/136 (2%)

Query: 26  ASAEELADVSTAFRWLGKNDRVVIEAYDDPKVVGVTCYVSRARTGGVKGTVGLAEDKSEA 85
           A AEE+  V T F+ +G + ++V+EA+DDP V  VTCYVSRA+TGG+KG +GLAED S+A
Sbjct: 19  AHAEEIGSVDTVFKMIGPDHKIVVEAFDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDA 78

Query: 86  SIACRQVAP---SIQFQGKLPVQEDVFSERMSILFKRLHVVRVVDAKRNTLVYLTYSDKL 142
           +I+C+QV P   S + +      E VF +R S++FK L VVR  DAKRN L YL YSDK+
Sbjct: 79  AISCQQVGPIELSDRIKNGKAQGEVVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKV 138

Query: 143 IDGSPMNAVTAVPVAP 158
           ++GSP NA++AVPV P
Sbjct: 139 VEGSPKNAISAVPVMP 154