BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2588.p (1238 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3122_1 [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, ... 931 0.0 mlr5175_1 [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, ... 775 0.0 CC3176_1 Non COG 696 0.0 RSc3122_2 [C] COG1014 Pyruvate Rso Ralstonia solanacearum 390 e-108 mlr5175_2 [C] COG1014 Pyruvate Mlo Mesorhizobium loti 361 7e-99 >RSc3122_1 [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits Rso Ralstonia solanacearum Length = 762 Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/710 (63%), Positives = 536/710 (75%), Gaps = 14/710 (1%) Query: 72 LAPVSLDDKYTATAGSIYLSGIQALVRLPMLQQIRDRAAGLNTAGFISGYRGSPLGGLDE 131 L VSLDDKYT G IY+SG QALVRLPMLQQ RDR AGLNTAGFISGYRGSPLG LD+ Sbjct: 13 LETVSLDDKYTLERGRIYISGTQALVRLPMLQQERDRIAGLNTAGFISGYRGSPLGALDQ 72 Query: 132 ALWQAQPHLAAQRVKFQPGVNEDMAATAVWGTQQIKLIGPSDYDGVYAMWYGKGPGVDRC 191 ALW+AQ HL+ + FQ G+NED+AAT+VWG+QQ+ L + +DGV+ MWYGKGPGVDR Sbjct: 73 ALWKAQKHLSGHNIVFQAGLNEDLAATSVWGSQQVNLYPSARFDGVFGMWYGKGPGVDRT 132 Query: 192 GDVLKHMNHAGTSAHGGVLLVAGDDHGAYSSTLPHQSDHIFSASMIPMLYPCNVQEYLDL 251 DV KH N AG+SAHGGVL++AGDDH SSTL HQS+H+F A+ IP+LYP NVQEYLD Sbjct: 133 IDVFKHANSAGSSAHGGVLVLAGDDHACKSSTLAHQSEHVFKAAGIPVLYPSNVQEYLDY 192 Query: 252 GLHGWAMSRYSGCVVGFKALADTVESSASVDANPLRVEIRLPTDFVMPPGGLNARLSTDT 311 GLHGWAMSRYSG V K + D VESSASVD +P R EI LP DFVMP GGLN R Sbjct: 193 GLHGWAMSRYSGLWVAMKCVTDVVESSASVDVDPHRAEIVLPEDFVMPAGGLNIRWPDPP 252 Query: 312 LGVQARKQEALMQDYKIYAALAYARANQLNRVMIDSPRARLGIIASGKSYLDVLEALSEL 371 L QEA + DYK YA LAY RAN+L+RV++DSP+AR GI+ +GK+YLDV +AL +L Sbjct: 253 L-----VQEARLLDYKWYAGLAYVRANKLDRVVLDSPQARFGIMTAGKAYLDVRQALVDL 307 Query: 372 GIDEAFAAEIGLRLFKVSMPWPLEPEGVREFAQGLDEILVVEEKRQMVEYQLKEQLYNWR 431 G+D+ IG+RL+KV WPLE G R FA+GL EILVVEEKRQ++EYQLKE+LYN+R Sbjct: 308 GLDDETCRRIGIRLYKVGCVWPLEAHGARAFAEGLQEILVVEEKRQILEYQLKEELYNYR 367 Query: 432 DDVRPRVIGKFDEK----GEWVAPRGEWLLTSKADFSVAQIARVIAARIARFHT-SDL-- 484 DDVRPRV GKFDE+ GEW P G WLL + + S A IAR IA R+ +F SD+ Sbjct: 368 DDVRPRVYGKFDERDNAGGEWSVPMGNWLLPAHYELSPALIARAIATRLEKFELPSDVRA 427 Query: 485 -IKARLAFLDAKDAVLTKAVNTPPRPAYYCSGCPHNTSTRVPEGSFALAGIGCHVMATAI 543 I+AR+A +DAK+ L K T R ++CSGCPHNTST VPEGS ALAGIGCH M + Sbjct: 428 RIEARIAIIDAKEKALAKPRITAERKPWFCSGCPHNTSTNVPEGSRALAGIGCHYMTVWM 487 Query: 544 YPEFNKLTTHMGGEGAPWIGQAPFSKVPHVFANLGDGTYFHSGYLAIRAAVAAKVNITYK 603 N + MGGEG WIGQ PFS HVFANLGDGTY+HSG LAIRA++AAKVNITYK Sbjct: 488 DRSTNTF-SQMGGEGVAWIGQMPFSGDKHVFANLGDGTYYHSGLLAIRASIAAKVNITYK 546 Query: 604 ILYNDAVAMTGGQPVDGTISVPMIAQQMAAEGVQRIALVSEDIARYAERTQLPSIVSVHD 663 +LYNDAVAMTGGQPVDG +SVP IA Q+ AEG RI +V+++ +Y +LP V+VH Sbjct: 547 LLYNDAVAMTGGQPVDGPLSVPQIAAQVHAEGTSRIVIVTDEPEKYNAAIKLPEGVTVHH 606 Query: 664 RQQMDAVQRELREWPGVSVIIYDQTCAAEKRRRRKKGQLPDPDERLFINSAVCEGCGDCG 723 R ++DA+QRELRE PG SV+IYDQTCA EKRRRRK+G + DP R FIN AVCEGCGDC Sbjct: 607 RDRLDAIQRELREVPGTSVLIYDQTCATEKRRRRKRGTMADPARRAFINDAVCEGCGDCS 666 Query: 724 TQSNCTAILPLETELGRKRVIDQSSCNKDYSCVKGFCPSFVTVTGGKLKK 773 +SNC ++ PLETELG KR I+QSSCNKD+SCV GFCPSFVT G +++K Sbjct: 667 VKSNCLSVEPLETELGTKRKINQSSCNKDFSCVNGFCPSFVTAEGAQVRK 716 >mlr5175_1 [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits Mlo Mesorhizobium loti Length = 724 Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/706 (55%), Positives = 508/706 (71%), Gaps = 20/706 (2%) Query: 72 LAPVSLDDKYTATAGSIYLSGIQALVRLPMLQQIRDRAAGLNTAGFISGYRGSPLGGLDE 131 L V+LDDK+ I+LSG QA++R+ ++Q+ RDR AGLNTAGF+SGYRGSPLGGLD Sbjct: 3 LHDVALDDKFDLGKERIFLSGAQAVIRMLLMQRERDRRAGLNTAGFVSGYRGSPLGGLDM 62 Query: 132 ALWQAQPHLAAQRVKFQPGVNEDMAATAVWGTQQIKLIGPSDYDGVYAMWYGKGPGVDRC 191 LW+A+ LA + FQPG+NE++AATA WG+QQ +L+G +DGV+++WYGKGPGVDR Sbjct: 63 QLWKAKKQLAGADIVFQPGLNEELAATACWGSQQTELLGEGTHDGVFSVWYGKGPGVDRS 122 Query: 192 GDVLKHMNHAGTSAHGGVLLVAGDDHGAYSSTLPHQSDHIFSASMIPMLYPCNVQEYLDL 251 GDV +H N AG+S HGGVL + GDDH A SST H ++ +F +M+P+L P VQE +D Sbjct: 123 GDVFRHANLAGSSKHGGVLALMGDDHMAESSTNAHATEFLFVDTMVPILNPAGVQEIIDY 182 Query: 252 GLHGWAMSRYSGCVVGFKALADTVESSASVDANPLRVEIRLPTDFVMPPGGLNARLSTDT 311 GL+G+AMSR++G K + D +ES+ASVDA+ R+ I +P +F MPPGGLN R D Sbjct: 183 GLYGFAMSRFAGTWAAIKCVKDNIESTASVDASLERLNIVVP-EFDMPPGGLNIRHEIDM 241 Query: 312 LGVQARKQEALMQDYKIYAALAYARANQLNRVMIDSPRA-RLGIIASGKSYLDVLEALSE 370 LG QE + +YK AA A+ AN LNR++ R +LGII GKSYLDV +AL + Sbjct: 242 LG-----QEERLHEYKRAAASAFIHANGLNRIVYSGGRNPKLGIITLGKSYLDVRQALED 296 Query: 371 LGIDEAFAAEIGLRLFKVSMPWPLEPEGVREFAQGLDEILVVEEKRQMVEYQLKEQLYNW 430 +GIDEA A IG+RLFKV PWPL+ + + EFA+GLD I+VVEEKR ++E QL+E LY Sbjct: 297 IGIDEAAANRIGIRLFKVGCPWPLDLQHIAEFARGLDTIVVVEEKRSLIEVQLRESLYGT 356 Query: 431 RDDVRPRVIGKFDEKGEWVAPRGEWLLTSKADFSVAQIARVIAARIAR-FHTSDLIKARL 489 +P ++GK DE RG+WL +K +IA + RI + S+ I AR+ Sbjct: 357 AS--QPVIVGKKDE-------RGDWLFPAKGALDPNEIAIALGERIVKTIGPSEEISARV 407 Query: 490 AFLDAKDAVLTKAVNTPPRPAYYCSGCPHNTSTRVPEGSFALAGIGCHVMATAIYPEFNK 549 L A+L A + R ++CSGCPHN+ST+VP+GS A AGIGCH MA ++ + N Sbjct: 408 GKLRQFQAMLADATDIGSRTPFFCSGCPHNSSTKVPDGSIAAAGIGCHFMA--LWMDRNT 465 Query: 550 LT-THMGGEGAPWIGQAPFSKVPHVFANLGDGTYFHSGYLAIRAAVAAKVNITYKILYND 608 L T MGGEGA W+GQAPFSK H+F NLGDGTY HSG LAIR A++++ NITYKILYND Sbjct: 466 LGFTAMGGEGAQWVGQAPFSKRGHIFQNLGDGTYNHSGTLAIRFALSSEANITYKILYND 525 Query: 609 AVAMTGGQPVDGTISVPMIAQQMAAEGVQRIALVSEDIARYAERTQLPSIVSVHDRQQMD 668 AVAMTGGQP +G ++V MIA+Q+ AEGV RIA+V+++ +YA + P+ ++H R +D Sbjct: 526 AVAMTGGQPHEGGLTVDMIARQVRAEGVDRIAIVTDEPDKYAGKADFPAGATIHHRDDLD 585 Query: 669 AVQRELREWPGVSVIIYDQTCAAEKRRRRKKGQLPDPDERLFINSAVCEGCGDCGTQSNC 728 VQRELR+ GVS+++YDQTCAAEKRRRRK+G PDPD+R+FIN +CEGCGDCG QSNC Sbjct: 586 LVQRELRDVKGVSILLYDQTCAAEKRRRRKRGTFPDPDKRVFINELICEGCGDCGVQSNC 645 Query: 729 TAILPLETELGRKRVIDQSSCNKDYSCVKGFCPSFVTVTGGKLKKS 774 +I P+ETE GRKR IDQSSCNKD+SCV GFCPSFVTV G K++K+ Sbjct: 646 VSIQPVETEFGRKRRIDQSSCNKDFSCVNGFCPSFVTVHGAKIRKA 691 >CC3176_1 Non COG Length = 715 Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/712 (50%), Positives = 469/712 (65%), Gaps = 21/712 (2%) Query: 86 GSIYLSGIQALVRLPMLQQIRDRAAGLNTAGFISGYRGSPLGGLDEALWQAQPHLAAQRV 145 G +++G+QAL+R+ + ++ DR AGLNT G++SGYRGSPLGGLD+ + + L A V Sbjct: 5 GRAFITGVQALLRVLLDRKRLDRKAGLNTGGYLSGYRGSPLGGLDQQAARIKKLLTAHDV 64 Query: 146 KFQPGVNEDMAATAVWGTQQIKLIGPSDYDGVYAMWYGKGPGVDRCGDVLKHMNHAGTSA 205 FQ G+NED+AATAVWG+QQ L + YDGV+ MWYGK PGVDR GDV KH N AGT Sbjct: 65 VFQEGLNEDLAATAVWGSQQANLFPGALYDGVFGMWYGKAPGVDRTGDVFKHANFAGTFP 124 Query: 206 HGGVLLVAGDDHGAYSSTLPHQSDHIFSASMIPMLYPCNVQEYLDLGLHGWAMSRYSGCV 265 GGVL VAGDDHG SSTLP QS+ F +P+L P +VQE LD GL G +MSR+SG Sbjct: 125 TGGVLAVAGDDHGCKSSTLPSQSEFAFQDFEMPVLSPADVQEVLDYGLLGISMSRFSGLW 184 Query: 266 VGFKALADTVESSASVDANPLRVEIRLPTDFVMPPGGLNARLSTDTLGVQARKQEALMQD 325 G ALADT++S ++D + R +I +P +F PPGGL R Q ++E M+ Sbjct: 185 TGMIALADTMDSGVTIDVSLDRHQIVVP-EFAFPPGGLGIRQKD-----QPMEKERRMRL 238 Query: 326 YKIYAALAYARANQLNRVMIDSP-----RARLGIIASGKSYLDVLEALSELGIDEAFAAE 380 +KI AALA+ARAN ++RV++ + +ARLGI+ G++Y DVLEA + +G+ AA+ Sbjct: 239 HKIPAALAFARANNIDRVVLGASHVKVGKARLGIVCQGQAYKDVLEAFTAMGMTLQEAAD 298 Query: 381 IGLRLFKVSMPWPLEPEGVREFAQGLDEILVVEEKRQMVEYQLKEQLYNWRDDVRPRVIG 440 +G+ ++KV MPWPLEP G+R FA GL+ ++V+E KR ++E Q + LY+ RPRVIG Sbjct: 299 LGVSIYKVGMPWPLEPLGLRAFAAGLETLMVIEHKRALIEPQARAALYDLPAQARPRVIG 358 Query: 441 KFDEKGEWVAPRGEWLLTSKADFSVAQIARVIAARIARFHTSDLIKARLAFLDAKDAVLT 500 K DEKG P LL+ SVA+IA I R+ + + +A L + A Sbjct: 359 KTDEKG---GP----LLSELGSLSVAEIALAIYDRLPQGPHMERAQAYLNRVSAAGVAAV 411 Query: 501 KAVNTPPRPAYYCSGCPHNTSTRVPEGSFALAGIGCHVMATAIYPEFNKLTTHMGGEGAP 560 R ++CSGCPHNTST++PEGS ALAGIGCH MA P L THMGGEG Sbjct: 412 SLAADQARKPFFCSGCPHNTSTKLPEGSRALAGIGCHYMAGFNDP-MTDLNTHMGGEGLT 470 Query: 561 WIGQAPFSKVPHVFANLGDGTYFHSGYLAIRAAVAAKVNITYKILYNDAVAMTGGQPVDG 620 W+G APF+ HVF NLGDGTY HSG LAIR AVAA NITYK+LYNDAVAMTGGQ + Sbjct: 471 WVGAAPFTSEKHVFQNLGDGTYNHSGSLAIRGAVAAGTNITYKLLYNDAVAMTGGQRAES 530 Query: 621 TISVPMIAQQMAAEGVQRIALVSEDIARYAERTQLPSIVSVHDRQQMDAVQRELREWPGV 680 + I +Q+AAEGV++ +V +++ RY L V + R + VQ LRE PG Sbjct: 531 GFTPAQITRQLAAEGVKKTVIVVDELERYQGVNDLAPGVEIFPRSDLMRVQEMLRETPGT 590 Query: 681 SVIIYDQTCAAEKRRRRKKGQLPDPDERLFINSAVCEGCGDCGTQSNCTAILPLETELGR 740 +V++YDQTCA EKRRRRK+G +P +R+FIN VCEGCGDC +SNC ++ PL TE GR Sbjct: 591 TVLLYDQTCATEKRRRRKRGSMPKATQRVFINPLVCEGCGDCSVKSNCVSVEPLATEFGR 650 Query: 741 KRVIDQSSCNKDYSCVKGFCPSFVTVTGGKLKKSRTGTTRQGAEYDFGPLPQ 792 KR I+QSSCN+DYSCV+GFCPSF+T+ G + +S+ AE PLP+ Sbjct: 651 KRKINQSSCNQDYSCVEGFCPSFITLEGAESAQSKKTPAALTAEST--PLPE 700 >RSc3122_2 [C] COG1014 Pyruvate Rso Ralstonia solanacearum Length = 425 Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust. Identities = 214/419 (51%), Positives = 281/419 (67%), Gaps = 11/419 (2%) Query: 823 MAAHLEGKGVSVLDMTGMSQKNGSVTSHVRIAARREAIGAQRIATGEADLVLGCDMLTAG 882 MAAH+EGKGV+VLDM G++QK G+V SHV+I R + I A RIA GEADLV+GCD + + Sbjct: 1 MAAHIEGKGVTVLDMAGLAQKGGAVLSHVQIGERPDTIHATRIAMGEADLVIGCDAIVSA 60 Query: 883 AFDAISKMRPGRTRAVVNLHQQPPGQFARNPDWQFPLEEVKALIIESVGQQADFIDATRL 942 + + +SK++ G+TRA+VN P F +NP+W+FP +A I +VG F DA+ L Sbjct: 61 SDEVLSKVQFGQTRAIVNSAATPTADFIKNPNWRFPGSSAEADIRAAVGDACAFEDASAL 120 Query: 943 ATALMGDAIATNLFMLGYAWQRGELPLTEAALLRAIELNGVAVQANQSAFGWGRRAAVD- 1001 A L+GDAI TN +LG+AWQ+G +PLT ALLRAIELNGV+V N++AF WGR A D Sbjct: 121 AVRLLGDAIYTNPLVLGFAWQKGWIPLTYDALLRAIELNGVSVDKNKTAFEWGRHLAHDR 180 Query: 1002 --LLKVENIAVPAQPVVLHMPLSLEQWIKRSVALLTDYQDAAYAAQYAEVVEAVHAAEAP 1059 +L + A A+ V+ +P +L+ I R V LLT YQ+AAYA + VVE V AEA Sbjct: 181 EAVLALAGAAPRAKAEVIALPATLDTLIARRVDLLTAYQNAAYADAFRVVVERVRTAEAA 240 Query: 1060 LGSD----KLSMTVARQLSRLMAYKDEYEVARLYTNGQFQQALAQQFEG----DFTLSFH 1111 + L+ VAR LSRLMAYKDEYEVARLYT+ F L QF+G D+ L+F Sbjct: 241 VAGAGQPLTLTEAVARNLSRLMAYKDEYEVARLYTDPAFLDKLRAQFDGEPGRDYQLNFW 300 Query: 1112 LAPPVLARKDGQGHLLKARYGGWMMTAFKLLARMKGLRGGVLDVFGRTAERRMERALIVQ 1171 LAPP+ A++D +GHL+K R+G M FKLLA+++GLRG LDVFG+T ERR ERALI + Sbjct: 301 LAPPLWAKRDEKGHLVKQRFGPNTMRIFKLLAKLRGLRGTALDVFGKTEERRTERALIGE 360 Query: 1172 YRSLVLGLLPRLTTDNLPTAIELAQLPELVRGYGHVKQQAVEHMHARQASLLAAFERAG 1230 YR+LV L+ L+T L AI+LA+LPE +RG+GHVK+ + R LLA + G Sbjct: 361 YRALVDELVSGLSTQKLALAIDLARLPEDIRGFGHVKEANLAAARVRWGKLLAQWRDPG 419 >mlr5175_2 [C] COG1014 Pyruvate Mlo Mesorhizobium loti Length = 435 Score = 361 bits (926), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 198/421 (47%), Positives = 268/421 (63%), Gaps = 9/421 (2%) Query: 810 GGTGVITIGALMGMAAHLEGKGVSVLDMTGMSQKNGSVTSHVRIAARREAIGAQRIATGE 869 GGTGV+T+GA++GMAAHLE KG ++DM G++QK GSV +HVRIA + I A R++ G+ Sbjct: 1 GGTGVVTVGAVLGMAAHLEDKGCGMIDMAGLAQKGGSVFTHVRIARTPDDIHAIRVSAGK 60 Query: 870 ADLVLGCDMLTAGAFDAISKMRPGRTRAVVNLHQQPPGQFARNPDWQFPLEEVKALIIES 929 ADLVLGCD++ +GA ++ +R G T + N + PG+FAR+ D+ P+E +K I + Sbjct: 61 ADLVLGCDLVVSGAKKVLTAVREGHTIFLANTAEIMPGEFARSADFSLPIERLKKAIRAA 120 Query: 930 VGQ-QADFIDATRLATALMGDAIATNLFMLGYAWQRGELPLTEAALLRAIELNGVAVQAN 988 G +A F DATR ATAL G+++ N+FMLG+A+Q G LPL+ A+ RAIELNG AV N Sbjct: 121 AGDDKAHFFDATRTATALFGNSLGANMFMLGFAFQHGGLPLSAEAVERAIELNGEAVAMN 180 Query: 989 QSAFGWGRRAAVDLLKVENIAVPAQP----VVLHMPLSLEQWIKRSVALLTDYQDAAYAA 1044 +AF WGRRAA V + AQP + +L++ I R VA LT YQ+AAY Sbjct: 181 IAAFRWGRRAAHQPDFVRGLV--AQPGRAGETAPVAQTLDEIIARRVAFLTAYQNAAYGK 238 Query: 1045 QYAEVVEAVHAAE--APLGSDKLSMTVARQLSRLMAYKDEYEVARLYTNGQFQQALAQQF 1102 +YA+ + + AAE A GS ++ AR L +LMA KDEYEVARLYT+G F L +QF Sbjct: 239 RYADRLTLLRAAETRAVPGSTAVTEAAARNLFKLMAIKDEYEVARLYTDGSFAAELGKQF 298 Query: 1103 EGDFTLSFHLAPPVLARKDGQGHLLKARYGGWMMTAFKLLARMKGLRGGVLDVFGRTAER 1162 + L FHLAPP++ R+ G K+ +G WMM F+LLA +KGLRG D+FG TAER Sbjct: 299 QSYEKLEFHLAPPIMGRRGNDGTPRKSSFGPWMMKGFRLLAALKGLRGTAFDLFGYTAER 358 Query: 1163 RMERALIVQYRSLVLGLLPRLTTDNLPTAIELAQLPELVRGYGHVKQQAVEHMHARQASL 1222 RMER L+ QY + + L A+ L +P L+RGYGHV+Q + E + L Sbjct: 359 RMERQLLAQYEGDLELVANSLAPGKADAAVALVSVPALIRGYGHVRQASAEKAAGERQRL 418 Query: 1223 L 1223 L Sbjct: 419 L 419