BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2587.p (386 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC1350 Non COG 506 e-143 PA0746 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aerug... 502 e-142 BMEI0689 [I] COG1960 Acyl-CoA dehydrogenases Bme Brucella melite... 461 e-129 mlr1201 [I] COG1960 Acyl-CoA dehydrogenases Mlo Mesorhizobium loti 428 e-119 SMb20753 [I] COG1960 Acyl-CoA dehydrogenases Sme Sinorhizobium m... 423 e-118 >CC1350 Non COG Length = 379 Score = 506 bits (1303), Expect = e-143, Method: Compositional matrix adjust. Identities = 239/377 (63%), Positives = 291/377 (77%) Query: 1 MDFELNEDQLAFQQSARAFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPENEG 60 MDF LNEDQ+A Q +ARAFA G++AP +A WDE HFP+DV+ +A ELGF G+Y E+ G Sbjct: 1 MDFALNEDQVAIQDAARAFAEGQLAPHSADWDENKHFPVDVLRQAAELGFAGIYVNEDVG 60 Query: 61 GLGLSRLDATIVFEELARACTSTAAYLTIHNMVSWMVATWGQGELKEEWCAQLAAGHKIG 120 G GLSRLDA+I+FE L+ AAYLTIHNM SWM+ +G +L++ + +L I Sbjct: 61 GSGLSRLDASIIFEALSYGDVPVAAYLTIHNMASWMIDRFGSDDLRQRYLPRLTTMELIA 120 Query: 121 SYCLTEPGSGSDAASLKTTARRVDDFYLINGSKAFISGAGSTDLLVVMARTGGPGARGVS 180 SYCLTEPGSGSDAA+++TTA+ D Y++NG KAFISG G +D+ VVMARTGG GA+GVS Sbjct: 121 SYCLTEPGSGSDAAAMRTTAKLDGDHYVLNGGKAFISGGGVSDIYVVMARTGGEGAKGVS 180 Query: 181 AIVVPGDTPGISYGKKESKMGWNSQPTRTISFDNVKVPVGNLLGEEGEGFVFAMKGLDGG 240 A VV G+S+G E KMGWN+QPT ++FDN +VPV N +G+EGEGF FAM GLDGG Sbjct: 181 AFVVEKGMEGLSFGANERKMGWNAQPTAQVNFDNCRVPVANRIGQEGEGFRFAMMGLDGG 240 Query: 241 RINIATCSVGAAQAALDAAHAYIKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA 300 R+NIA+CS+G AQ ALD A AY++ R QFGRP+ DFQALQFKLADM TEL AAR MVR A Sbjct: 241 RLNIASCSLGGAQFALDTAKAYLETRNQFGRPLKDFQALQFKLADMATELEAARLMVRRA 300 Query: 301 ATKLDAGSPEATTYCAMAKRLATDLGFNICNEALQLHGGYGYIREYPLERYFRDVRVHQI 360 A LD+ PEAT CAMAKR ATD GF + N+ALQLHGGYGY+++YPLER RD+RVHQI Sbjct: 301 AHALDSKHPEATKLCAMAKRFATDAGFQVANDALQLHGGYGYLQDYPLERLVRDLRVHQI 360 Query: 361 LEGTNEIMRVIISRNLL 377 LEGTNEIMRVII+R + Sbjct: 361 LEGTNEIMRVIIAREMF 377 >PA0746 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aeruginosa Length = 387 Score = 502 bits (1293), Expect = e-142, Method: Compositional matrix adjust. Identities = 240/377 (63%), Positives = 298/377 (79%) Query: 1 MDFELNEDQLAFQQSARAFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPENEG 60 MDF+L E+Q +SARAFA E+AP AA WD + HFP++VI A E G+ GLY E +G Sbjct: 1 MDFDLTEEQRLLVESARAFARHELAPKAADWDRDHHFPVEVIRAAAEQGYLGLYIAEEDG 60 Query: 61 GLGLSRLDATIVFEELARACTSTAAYLTIHNMVSWMVATWGQGELKEEWCAQLAAGHKIG 120 GLGLSRL +++FE+LA C +T AY++IHNM +WM+A++G LKE W L G + Sbjct: 61 GLGLSRLSTSLIFEQLAAGCVATTAYISIHNMAAWMLASFGDAALKEAWLPGLIGGESLA 120 Query: 121 SYCLTEPGSGSDAASLKTTARRVDDFYLINGSKAFISGAGSTDLLVVMARTGGPGARGVS 180 SYCLTEP +GSDAA L+T ARR D Y+++GSK FISGAGST +L+VMARTG GARG+S Sbjct: 121 SYCLTEPDAGSDAARLRTRARREGDEYVLDGSKCFISGAGSTQVLIVMARTGEDGARGIS 180 Query: 181 AIVVPGDTPGISYGKKESKMGWNSQPTRTISFDNVKVPVGNLLGEEGEGFVFAMKGLDGG 240 +VP D PGI YG+ E KMGW +QPTRTI+F+ V++P GN +G EG+GFV+AMKGLDGG Sbjct: 181 CFLVPADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIGPEGQGFVYAMKGLDGG 240 Query: 241 RINIATCSVGAAQAALDAAHAYIKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA 300 R+NIA+CS+GAAQAAL+ + Y++ER+QFG+P+A FQALQFKLADM TEL A+RQMVRL Sbjct: 241 RLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQMVRLG 300 Query: 301 ATKLDAGSPEATTYCAMAKRLATDLGFNICNEALQLHGGYGYIREYPLERYFRDVRVHQI 360 A +LD G EAT YCAMAKR ATD F++CNEALQLHGGYGY+ +YPLER+ RD RVHQI Sbjct: 301 AHRLDRGDAEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLERWVRDTRVHQI 360 Query: 361 LEGTNEIMRVIISRNLL 377 LEGTNEIMRVI++R LL Sbjct: 361 LEGTNEIMRVIVARRLL 377 >BMEI0689 [I] COG1960 Acyl-CoA dehydrogenases Bme Brucella melitensis Length = 385 Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust. Identities = 220/377 (58%), Positives = 281/377 (74%) Query: 3 FELNEDQLAFQQSARAFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPENEGGL 62 FELNEDQ A Q+ A+AFAA +AP A +WD + HFP+D++ + G LG G+Y ++ GG Sbjct: 9 FELNEDQCAIQEMAQAFAADRIAPQALQWDRDKHFPVDILRETGPLGMGGIYVRDDVGGS 68 Query: 63 GLSRLDATIVFEELARACTSTAAYLTIHNMVSWMVATWGQGELKEEWCAQLAAGHKIGSY 122 GL RLDA ++FE LA AC + +A+L+IHNM +WM+ T+G E ++ + QL + + SY Sbjct: 69 GLKRLDAVLIFEALATACPTFSAFLSIHNMAAWMIDTFGNEEQRQRFLPQLTSMEWLASY 128 Query: 123 CLTEPGSGSDAASLKTTARRVDDFYLINGSKAFISGAGSTDLLVVMARTGGPGARGVSAI 182 CLTEPGSGSDAA+LKT A R D Y++NG+K FISGAGSTDL V M RTG G +G+S + Sbjct: 129 CLTEPGSGSDAAALKTRAVRDGDHYIVNGAKQFISGAGSTDLYVTMVRTGEDGPKGISTL 188 Query: 183 VVPGDTPGISYGKKESKMGWNSQPTRTISFDNVKVPVGNLLGEEGEGFVFAMKGLDGGRI 242 VVP D PG+S+G E KMGWN+QPTRT+ FDN +VPV N LG+EG GF AM GLDGGR+ Sbjct: 189 VVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVGFKIAMPGLDGGRL 248 Query: 243 NIATCSVGAAQAALDAAHAYIKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLAAT 302 NIA CS+G AQAA A Y ERK FG+ I FQALQF+LADM+TEL A+R ++ AA+ Sbjct: 249 NIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMETELAASRMLLYTAAS 308 Query: 303 KLDAGSPEATTYCAMAKRLATDLGFNICNEALQLHGGYGYIREYPLERYFRDVRVHQILE 362 KLD + +A + AMAKR TD FN+ NEALQL GGYGY+ +Y +E+ RD+RVHQILE Sbjct: 309 KLDRKTHDAGKWSAMAKRFVTDTSFNVANEALQLLGGYGYLHDYGIEKLVRDLRVHQILE 368 Query: 363 GTNEIMRVIISRNLLGR 379 GTNEIMRVII+R+++GR Sbjct: 369 GTNEIMRVIIARHMIGR 385 >mlr1201 [I] COG1960 Acyl-CoA dehydrogenases Mlo Mesorhizobium loti Length = 388 Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust. Identities = 209/377 (55%), Positives = 268/377 (71%) Query: 3 FELNEDQLAFQQSARAFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPENEGGL 62 FELNE+Q A Q+ A+AFAA +AP A WD HFP DVI + G LG G+Y ++ GG Sbjct: 12 FELNEEQRAIQEMAQAFAADRVAPNALDWDRRKHFPADVIRETGPLGLGGIYVRDDVGGS 71 Query: 63 GLSRLDATIVFEELARACTSTAAYLTIHNMVSWMVATWGQGELKEEWCAQLAAGHKIGSY 122 L RLDA ++FE L+ A +++++IHNMV+ M+ +G E ++ + +L + + SY Sbjct: 72 ALGRLDAVLIFEALSHADPGFSSFISIHNMVASMIDRFGNDEQRQRFLPKLTSMEWLASY 131 Query: 123 CLTEPGSGSDAASLKTTARRVDDFYLINGSKAFISGAGSTDLLVVMARTGGPGARGVSAI 182 CLTEPGSGSDAA+LKT A + Y++NG+K FISGAG +D+ VM RTG G +G+S I Sbjct: 132 CLTEPGSGSDAAALKTRAVKSGGDYVLNGAKQFISGAGDSDVYAVMVRTGADGPKGISTI 191 Query: 183 VVPGDTPGISYGKKESKMGWNSQPTRTISFDNVKVPVGNLLGEEGEGFVFAMKGLDGGRI 242 VVP D PG+S+G E KMGW+ Q TR + F++ KVP NLL EG GF AM GLDGGR+ Sbjct: 192 VVPKDAPGLSFGANEHKMGWHMQSTRQVIFEDCKVPAENLLSGEGAGFGIAMAGLDGGRL 251 Query: 243 NIATCSVGAAQAALDAAHAYIKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLAAT 302 NIA CS+G AQ+ALD A +Y ERK FG I FQALQF+LADM+TEL AAR + AA+ Sbjct: 252 NIAACSLGGAQSALDKALSYTAERKAFGSKINQFQALQFRLADMETELQAARIFLYAAAS 311 Query: 303 KLDAGSPEATTYCAMAKRLATDLGFNICNEALQLHGGYGYIREYPLERYFRDVRVHQILE 362 KLD +P+A + AMAKR TD GFN+ N ALQL GGYGY+ +Y +E+ RD+RVHQILE Sbjct: 312 KLDRKAPDAGKWSAMAKRFVTDTGFNVANNALQLLGGYGYLHDYGIEKLVRDLRVHQILE 371 Query: 363 GTNEIMRVIISRNLLGR 379 GTNEIMRVII+R L+GR Sbjct: 372 GTNEIMRVIIARALIGR 388 >SMb20753 [I] COG1960 Acyl-CoA dehydrogenases Sme Sinorhizobium meliloti Length = 380 Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust. Identities = 204/379 (53%), Positives = 266/379 (70%) Query: 1 MDFELNEDQLAFQQSARAFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPENEG 60 MDF L+E+Q A + A FA E+AP A WD++ HFP++ + A LG G+Y ++ G Sbjct: 1 MDFRLSEEQEAIRTMALDFARDEIAPHAVDWDQQKHFPVETLRAAAALGMAGIYIRDDVG 60 Query: 61 GLGLSRLDATIVFEELARACTSTAAYLTIHNMVSWMVATWGQGELKEEWCAQLAAGHKIG 120 G GL+RLDA ++ E LA C + A++++IHNM + M+ +G E + L + Sbjct: 61 GTGLTRLDAAMIIEALATGCPAIASFVSIHNMCAGMIDRYGTDEQRRRLLPPLLTMDVLA 120 Query: 121 SYCLTEPGSGSDAASLKTTARRVDDFYLINGSKAFISGAGSTDLLVVMARTGGPGARGVS 180 SYCLTEPGSGSDAA+LKT A R D YL+ G K FISGAG + L +VMARTG G +G+S Sbjct: 121 SYCLTEPGSGSDAAALKTRAVREGDAYLLTGQKQFISGAGESGLYIVMARTGEEGPKGIS 180 Query: 181 AIVVPGDTPGISYGKKESKMGWNSQPTRTISFDNVKVPVGNLLGEEGEGFVFAMKGLDGG 240 A VV D PG+++G E KMGW++QPTR + DNV+V V N LG EGEGF AM GLDGG Sbjct: 181 AFVVEKDAPGLTFGANEKKMGWHAQPTRAVMLDNVRVSVENRLGAEGEGFRIAMAGLDGG 240 Query: 241 RINIATCSVGAAQAALDAAHAYIKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA 300 R++IA S+G AQ+A D A AY++ER+ FG+ I +FQALQF+LADM T+L AR + A Sbjct: 241 RLSIAAASLGGAQSAFDKALAYVQERRAFGKAIGEFQALQFRLADMATDLEIARTFLWRA 300 Query: 301 ATKLDAGSPEATTYCAMAKRLATDLGFNICNEALQLHGGYGYIREYPLERYFRDVRVHQI 360 A LDA PEAT CAMAKR TD F++ N+ALQLHGGYGY+ +Y +E+ RD+RVHQI Sbjct: 301 ACALDAADPEATKLCAMAKRFVTDRCFSVANDALQLHGGYGYLADYGVEKIVRDLRVHQI 360 Query: 361 LEGTNEIMRVIISRNLLGR 379 LEGTNEIMR+I+SR ++GR Sbjct: 361 LEGTNEIMRLIVSRAIMGR 379