BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2560.p (263 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp1507 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 362 e-100 PA2308 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 311 1e-84 MJ0412 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 204 2e-52 MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 202 4e-52 MK0603 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 202 5e-52 >RSp1507 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Rso Ralstonia solanacearum Length = 261 Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust. Identities = 184/254 (72%), Positives = 204/254 (80%), Gaps = 10/254 (3%) Query: 13 PSRPLLEIDRVTLQYKTSDSLVTATQSVSFNVHPGDRYILLGPSGCGKSTLLKAIGGYLQ 72 P PLL++ VTLQYKT LVTAT V F VHPG+R ILLGPSGCGKSTLLKAIGGYL Sbjct: 4 PPPPLLDVRGVTLQYKTRQHLVTATYRVDFQVHPGERTILLGPSGCGKSTLLKAIGGYLA 63 Query: 73 PTSGAIRLKGREVHEPGPDRMMVFQEFDQLLPWKTVRQNVEFALHASGRLHGRAAAERAE 132 PT G IRLKG+ V PGPDRMMVFQEFDQLLPWKTV++NV F L A+G+L R A RA Sbjct: 64 PTEGEIRLKGQPVTRPGPDRMMVFQEFDQLLPWKTVKENVLFPLLATGKLGAREAEARAL 123 Query: 133 YYIGKVGLAKFIDSYPHMLSGGMKQRVSIARGMAMEPDVLLMDEPFAALDALTRRKMQDE 192 +YI KV LAKF D +PHMLSGGMKQRV+IARGMAMEPDVLLMDEPFAALDALTRRKMQDE Sbjct: 124 HYIHKVNLAKFADHHPHMLSGGMKQRVAIARGMAMEPDVLLMDEPFAALDALTRRKMQDE 183 Query: 193 LLRLWDDTQFTVLFVTHSIEEAIRVGTRILLLTPHPGQVRAELNSI-----DPSQLGTAA 247 LL+LWD+T+FTVLFVTHSI EAIR G+RIL+L+PHPGQVRAEL S+ DP + Sbjct: 184 LLQLWDETRFTVLFVTHSIPEAIRCGSRILILSPHPGQVRAELPSLARGDDDPERFKA-- 241 Query: 248 QAELETRINDMLFA 261 LE I+DMLFA Sbjct: 242 ---LEAEIHDMLFA 252 >PA2308 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Pae Pseudomonas aeruginosa Length = 282 Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 155/255 (60%), Positives = 194/255 (76%), Gaps = 12/255 (4%) Query: 13 PSRPLLEIDRVTLQYKTSDSLVTATQSVSFNVHPGDRYILLGPSGCGKSTLLKAIGGYLQ 72 P+ LL +D V+L+Y+T +V ATQ VSF V P DR++LLGPSGCGKSTLLKA+ G++ Sbjct: 12 PADALLAVDGVSLEYRTRSRVVRATQRVSFEVDPADRFVLLGPSGCGKSTLLKAVAGFIT 71 Query: 73 PTSGAIRLKGREVHEPGPDRMMVFQEFDQLLPWKTVRQNVEFALHASGRLHGRAAAERAE 132 P+ G IRL+G+ V PGPDR++VFQEFDQL PWKTVRQNV F L SG++ A RA+ Sbjct: 72 PSEGEIRLQGQAVRAPGPDRIVVFQEFDQLPPWKTVRQNVLFPLRVSGQVTRDEAERRAD 131 Query: 133 YYIGKVGLAKFIDSYPHMLSGGMKQRVSIARGMAMEPDVLLMDEPFAALDALTRRKMQDE 192 + KVGLA F ++YPH LSGGMK RV+IAR +AM+P +LLMDEPFAALDALTRRKMQ+E Sbjct: 132 ECLEKVGLAGFAEAYPHTLSGGMKARVAIARALAMQPKILLMDEPFAALDALTRRKMQEE 191 Query: 193 LLRLWDDTQFTVLFVTHSIEEAIRVGTRILLLTPHPGQVRAE-------LNSIDPSQLGT 245 LLRLW++ +FT+LFVTHSIEEA+ VG RILLL+PHPG+VRAE L+S+ L Sbjct: 192 LLRLWEEVRFTLLFVTHSIEEALVVGNRILLLSPHPGRVRAEVHGHPFGLHSLGGEPLQA 251 Query: 246 AAQAELETRINDMLF 260 AA+ RI+ +LF Sbjct: 252 AAR-----RIHRLLF 261 >MJ0412 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mja Methanococcus jannaschii Length = 267 Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 100/228 (43%), Positives = 154/228 (67%), Gaps = 3/228 (1%) Query: 12 DPSRPLLEIDRVTLQYKTSDSLVTATQSVSFNVHPGDRYILLGPSGCGKSTLLKAIGGYL 71 D + L+++ +T ++ + + V A +++ V+ + ++GPSGCGK+TLL+ I G Sbjct: 11 DRMKVKLKVENLTKIFEFNGNRVKALDNINLEVYENEFLTVMGPSGCGKTTLLRIIAGLD 70 Query: 72 QPTSGAIRLKGREVHEPGPDRMMVFQEFDQLLPWKTVRQNVEFALHASGRLHGRAAAERA 131 PT G + L G+EV PG DR +VFQ++ L+PW+TV +NV F L G + E A Sbjct: 71 YPTEGKVLLDGKEVKGPGADRGVVFQQY-TLMPWRTVLKNVTFGLELKG-IPKNERIEIA 128 Query: 132 EYYIGKVGLAKFIDSYPHMLSGGMKQRVSIARGMAMEPDVLLMDEPFAALDALTRRKMQD 191 + +I VGL F D+YP+ LSGGM+QRV+IAR +A +P+++LMDEPFAALDA TR +Q+ Sbjct: 129 KKFIKMVGLEGFEDAYPYQLSGGMQQRVAIARTLANDPEIVLMDEPFAALDAQTRNILQN 188 Query: 192 ELLRLWDDTQFTVLFVTHSIEEAIRVGTRILLLTPHPGQVRAELNSID 239 ELL++W + TV FVTHS++EA+ + R+++LT PG+++ E+ ID Sbjct: 189 ELLKIWQKEKKTVFFVTHSVDEAVYLSDRVVVLTARPGRIK-EIVKID 235 >MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mac Methanosarcina acetivorans str.C2A Length = 268 Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 103/212 (48%), Positives = 141/212 (66%), Gaps = 3/212 (1%) Query: 28 KTSDSLVTATQSVSFNVHPGDRYILLGPSGCGKSTLLKAIGGYLQPTSGAIRLKGREVHE 87 K +S A ++SF+V G+ LLGPSGCGK+TLL+ G TSG I L G + Sbjct: 30 KEDESGTEALHNISFDVQDGEFICLLGPSGCGKTTLLRIAAGLETLTSGEITLNGVPITG 89 Query: 88 PGPDRMMVFQEFDQLLPWKTVRQNVEFALHASGRLHGRAAAERAEYYIGKVGLAKFIDSY 147 P P R MVFQ++ L PW+TV N+ F L G + A ++ E Y+ VGL +F +SY Sbjct: 90 PDPKRGMVFQQYS-LFPWRTVIDNITFGLEMQG-IKKSEARKQVEKYLELVGLGQFKNSY 147 Query: 148 PHMLSGGMKQRVSIARGMAMEPDVLLMDEPFAALDALTRRKMQDELLRLWDDTQFTVLFV 207 PH LSGGM+QR +IAR +A EP+VLLMDEPF ALDA TR +QDELL++W+ T LFV Sbjct: 148 PHELSGGMQQRAAIARALANEPEVLLMDEPFGALDAQTRNVLQDELLKIWEQKHVTFLFV 207 Query: 208 THSIEEAIRVGTRILLLTPHPGQVRAELNSID 239 THS++EA+ + RI+++T PG+V+ E+ S++ Sbjct: 208 THSVDEAVFLSDRIVVMTSRPGRVK-EIVSVE 238 >MK0603 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mka Methanopyrus kandleri AV19 Length = 246 Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 111/238 (46%), Positives = 151/238 (63%), Gaps = 10/238 (4%) Query: 27 YKTSDSLVTATQSVSFNVHPGDRYILLGPSGCGKSTLLKAIGGYLQPTSGAIRLKGREVH 86 +K+ D L ++F V G+ + ++GPSGCGK+TLLK I G +G + + G EV Sbjct: 11 HKSYDDL-KVLDGITFEVSEGEFFAIVGPSGCGKTTLLKIIAGLEDYDAGRVLVDGEEVR 69 Query: 87 EPGPDRMMVFQEFDQLLPWKTVRQNVEFALHASGRLHGRAAAERAEYYIGKV--GLAKFI 144 EPGPDR +VFQE+ + PWKTV +NV FA G+ AER KV GL F Sbjct: 70 EPGPDRALVFQEY-AIFPWKTVLENVMFAPLMQGK--DPEEAERIARECLKVVPGLEGFE 126 Query: 145 DSYPHMLSGGMKQRVSIARGMAMEPDVLLMDEPFAALDALTRRKMQDELLRLWDDTQFTV 204 D+YP LSGGMKQRV+IAR +A EP +LLMDEPFAA+DA TR KMQ+ELL++W+ T T+ Sbjct: 127 DAYPKQLSGGMKQRVAIARALAAEPRILLMDEPFAAVDAQTRNKMQEELLKIWERTGQTI 186 Query: 205 LFVTHSIEEAIRVGTRILLLTPHPGQVRAELNSID---PSQLGTAAQAELETRINDML 259 L VTH++EEA+ + R+++L+P P ++ ++ ID P EL RI DM+ Sbjct: 187 LLVTHNVEEAVFLADRVMVLSPRPAEI-VDIVEIDLPRPRDRTDPEFVELRARILDMI 243