BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2549.p (289 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3126 Non COG 292 6e-79 PA4025 [E] COG4302 Ethanolamine ammonia-lyase, small subunit Pae... 289 5e-78 STM2457 [E] COG4302 Ethanolamine ammonia-lyase, small subunit St... 128 2e-29 eutC [E] COG4302 Ethanolamine ammonia-lyase, small subunit Eco E... 126 5e-29 CAC2717 [E] COG4302 Ethanolamine ammonia-lyase, small subunit Ca... 126 6e-29 >RSc3126 Non COG Length = 270 Score = 292 bits (748), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 165/266 (62%), Positives = 192/266 (72%), Gaps = 8/266 (3%) Query: 22 TVIANPWEALRRFTAARIALGRSGVSLPTAPQLAFQLAHAQARDAVHLPLEVEALKNQLQ 81 TV NPW+ALRR T ARIALGR+GVSLPT PQLAFQ AHAQARDAVHLP + AL+ QL Sbjct: 11 TVTQNPWQALRRLTPARIALGRAGVSLPTRPQLAFQAAHAQARDAVHLPFDPAALQAQLH 70 Query: 82 QHGICRAEDVLHVQSAAADRLVYLQRPDLGRRLSDASRQQLLERFGTVGERRYDVGFVIA 141 G L + SAA DR YLQRPDLGR+L DA QLL D+ V+A Sbjct: 71 AQG----HATLLLHSAARDRDQYLQRPDLGRQL-DAPSAQLLGDHAAAHPGGVDIALVVA 125 Query: 142 DGLSALAIVRNAAPFLAEVMHRIAPQGWSLAPPVIVQQGRVAVADEIGELLGVKLVVILI 201 DGLSALA+ R+AAP +A V + QGWS+AP +V+QGRVAVADE+GE LG ++VVILI Sbjct: 126 DGLSALAVHRHAAPLIAGVAEGVRAQGWSMAPIALVEQGRVAVADEVGERLGARMVVILI 185 Query: 202 GERPGLSSPDSMGLYLTWMPARGLTDASRNCISNVRPEGLSYPEAAYKLHYLMAQAHQRS 261 GERPGLSSPDS+GLY T+ P GLTDA+RNCISNVRPEGL Y AA+KL YLM +A +R Sbjct: 186 GERPGLSSPDSLGLYFTYAPRVGLTDAARNCISNVRPEGLGYAAAAHKLLYLMREAWRRQ 245 Query: 262 LSGVALKDETASEGQELDV-RRNFLL 286 SGV LK+ A+E L+ RRNFLL Sbjct: 246 GSGVLLKE--AAEVPLLEAGRRNFLL 269 >PA4025 [E] COG4302 Ethanolamine ammonia-lyase, small subunit Pae Pseudomonas aeruginosa Length = 273 Score = 289 bits (740), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 160/263 (60%), Positives = 190/263 (72%), Gaps = 7/263 (2%) Query: 26 NPWEALRRFTAARIALGRSGVSLPTAPQLAFQLAHAQARDAVHLPLEVEALKNQLQQHGI 85 NPW LR+ T ARIALGR+G SLPT PQL FQ AHAQARDAVHLP + A+ + L+Q G Sbjct: 13 NPWLPLRQLTPARIALGRTGTSLPTRPQLDFQYAHAQARDAVHLPFDHAAISDGLRQRG- 71 Query: 86 CRAEDVLHVQSAAADRLVYLQRPDLGRRLSDASRQQLLERFGTVGERRYDVGFVIADGLS 145 D L + SAAADR VYLQRPDLGRRL +AS Q+L E + + D+ V+ADGLS Sbjct: 72 ---RDSLLLHSAAADRHVYLQRPDLGRRLDEASVQRLREHAAGY-DGQIDLAIVVADGLS 127 Query: 146 ALAIVRNAAPFLAEVMHRIAPQGWSLAPPVIVQQGRVAVADEIGELLGVKLVVILIGERP 205 ALA+ R+ PFL + + +GWSL+P V+V+QGRVAVADEIGELL K+ VILIGERP Sbjct: 128 ALAVQRHTLPFLERLEEQALAEGWSLSPVVLVEQGRVAVADEIGELLRAKMSVILIGERP 187 Query: 206 GLSSPDSMGLYLTWMPARGLTDASRNCISNVRPEGLSYPEAAYKLHYLMAQAHQRSLSGV 265 GLSSPDS+GLY TW P GLTDA RNCISNVR EGLSY AA++L YLM +A +R LSGV Sbjct: 188 GLSSPDSLGLYFTWAPRVGLTDAYRNCISNVRLEGLSYGMAAHRLLYLMREACRRQLSGV 247 Query: 266 ALKDETASEGQELDVRR--NFLL 286 LKDE + + + R NFLL Sbjct: 248 NLKDEAEVQALDGEAPRTGNFLL 270 >STM2457 [E] COG4302 Ethanolamine ammonia-lyase, small subunit Sty Salmonella typhimurium LT2 Length = 298 Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 88/254 (34%), Positives = 132/254 (51%), Gaps = 28/254 (11%) Query: 24 IANPWEA-----LRRFTAARIALGRSGVSLPTAPQLAFQLAHAQARDAVHLPLEVEALKN 78 + NP A LRR TAAR+ GR+G T L F H++++D V + E +K Sbjct: 61 VENPHRADVLTELRRSTAARVCTGRAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVK- 119 Query: 79 QLQQHGICRAEDVLHVQSAAADRLVYLQRPDLGRRLS----DASRQQLLERFGTVGERRY 134 A+ +L V+S +D+ +YL RPD+GRRLS DA + Q + Sbjct: 120 ---------AQGLLEVRSEISDKNLYLTRPDMGRRLSPEAIDALKSQCV--------MNP 162 Query: 135 DVGFVIADGLSALAIVRNAAPFLAEVMHRIAPQGWSLAPPVIVQQGRVAVADEIGELLGV 194 DV V++DGLS AI N L ++ + G ++ P V+ GRV + D+IGE+LG Sbjct: 163 DVQVVVSDGLSTDAITANYEEILPPLLAGLKQAGLNVGTPFFVRYGRVKIEDQIGEILGA 222 Query: 195 KLVVILIGERPGLSSPDSMGLYLTWMPARGLT-DASRNCISNVRPEGLSYPEAAYKLHYL 253 K+V++L+GERPGL +S+ Y + P T +A R CISN+ G EAA + L Sbjct: 223 KVVILLVGERPGLGQSESLSCYAVYSPRVATTVEADRTCISNIHQGGTPPVEAAAVIVDL 282 Query: 254 MAQAHQRSLSGVAL 267 + ++ SG+ + Sbjct: 283 AKRMLEQKASGINM 296 >eutC [E] COG4302 Ethanolamine ammonia-lyase, small subunit Eco Escherichia coli K12 Length = 295 Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 86/250 (34%), Positives = 127/250 (50%), Gaps = 20/250 (8%) Query: 24 IANPWEA-----LRRFTAARIALGRSGVSLPTAPQLAFQLAHAQARDAVHLPLEVEALKN 78 + NP A LRR T AR+ GR+G T L F H++++D V + E +K Sbjct: 58 VENPHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVK- 116 Query: 79 QLQQHGICRAEDVLHVQSAAADRLVYLQRPDLGRRLSDASRQQLLERFGTVGERRYDVGF 138 A+ +L V+S +D+ +YL RPD+GRRL + +E DV Sbjct: 117 ---------AQGLLEVRSEISDKNLYLTRPDMGRRLC----AEAVEALKAQCVANPDVQV 163 Query: 139 VIADGLSALAIVRNAAPFLAEVMHRIAPQGWSLAPPVIVQQGRVAVADEIGELLGVKLVV 198 VI+DGLS AI N L +M + G + P V+ GRV + D+IGE+LG K+V+ Sbjct: 164 VISDGLSTDAITVNYEEILPPLMAGLKQAGLKVGTPFFVRYGRVKIEDQIGEILGAKVVI 223 Query: 199 ILIGERPGLSSPDSMGLYLTWMPARGLT-DASRNCISNVRPEGLSYPEAAYKLHYLMAQA 257 +L+GERPGL +S+ Y + P T +A R CISN+ G EAA + L + Sbjct: 224 LLVGERPGLGQSESLSCYAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVIVDLAKRM 283 Query: 258 HQRSLSGVAL 267 ++ SG+ + Sbjct: 284 LEQKASGINM 293 >CAC2717 [E] COG4302 Ethanolamine ammonia-lyase, small subunit Cac Clostridium acetobutylicum Length = 242 Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 77/238 (32%), Positives = 126/238 (52%), Gaps = 14/238 (5%) Query: 31 LRRFTAARIALGRSGVSLPTAPQLAFQLAHAQARDAVHLPLEVEALKNQLQQHGICRAED 90 L+ T ARI +GR+G L T L F+ HA A DAV ++ E L + L + Sbjct: 18 LKALTPARICVGRAGTRLKTNTFLKFRADHAVAMDAVWSSVD-EKLIDTL---------N 67 Query: 91 VLHVQSAAADRLVYLQRPDLGRRLSDASRQQLLERFGTVGERRYDVGFVIADGLSALAIV 150 L VQ+ A D+ Y+ RPDLGR+ S+ + + + + E DV + DGLSA AI Sbjct: 68 FLKVQTLAKDKEEYITRPDLGRKFSEETLDYI--KNNCINEP--DVQIIAGDGLSATAIN 123 Query: 151 RNAAPFLAEVMHRIAPQGWSLAPPVIVQQGRVAVADEIGELLGVKLVVILIGERPGLSSP 210 N ++ ++ +G+ + P+ V+ RVA D+I E L K+ +ILIGERPGL++ Sbjct: 124 ANLRKIYFVIVEKLKSRGYKVGTPIFVKYARVATMDKISEELNAKVTIILIGERPGLATG 183 Query: 211 DSMGLYLTWMPARGLTDASRNCISNVRPEGLSYPEAAYKLHYLMAQAHQRSLSGVALK 268 +SM Y+ + + ++ R +SN+ +G+ +A ++ ++ + SGV L+ Sbjct: 184 ESMSSYMAYESSTKKPESQRTVVSNIHNKGIPSVDAGKEIVRIIDIMMKEKKSGVELR 241