BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2530.p         (107 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0987 [GER] COG0697 Permeases of the drug/metabolite transport...    29   2.5  
MYPU_0120 Non COG                                                      29   2.7  
alr5317 Non COG                                                        28   5.1  
SSO2761 [I] COG1960 Acyl-CoA dehydrogenases Sso Sulfolobus solfa...    28   5.7  
FN2105 [S] COG3333 Uncharacterized protein conserved in bacteria...    28   5.8  

>RSc0987 [GER] COG0697 Permeases of the drug/metabolite transporter (DMT)
           superfamily Rso Ralstonia solanacearum
          Length = 313

 Score = 29.3 bits (64), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 24  GATLILLLTISSQVYEQWRSRSTQGVSHWLFAGQLAASAGFVTYSLLQGDWVFVVSNVFL 83
           GA +  LL +++ ++  W  R     S W +A  LA S   V+++LL+G      ++  L
Sbjct: 113 GAIITGLLPLATALFAAWFGRERP--SPWFWACALAGSVLVVSFALLRGAGTLHRADWLL 170

Query: 84  LLTALLGQVLYLRNRR--RQQGGSQ 106
               + G + Y    +  R+ GG+Q
Sbjct: 171 FAAMVAGALGYAVGGKLSRELGGTQ 195


>MYPU_0120 Non COG
          Length = 228

 Score = 28.9 bits (63), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 12/68 (17%)

Query: 15 DHITDLIGWGATLILLLTISSQVYEQWRSRSTQGV------------SHWLFAGQLAASA 62
             T+++GW A ++  L +  Q+   +RS++T+ +            S WLF G L  + 
Sbjct: 2  KEFTEVVGWVAVIVTTLIMLPQLISIYRSKNTKKINPFSFWILHFSFSIWLFYGYLINNI 61

Query: 63 GFVTYSLL 70
             T +L+
Sbjct: 62 QITTSNLI 69


>alr5317 Non COG
          Length = 431

 Score = 28.1 bits (61), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 19/38 (50%)

Query: 53  LFAGQLAASAGFVTYSLLQGDWVFVVSNVFLLLTALLG 90
           L A  LA  AG +  +   G W  V+S VFLL   L G
Sbjct: 241 LVAASLAPPAGIIGMASAIGRWDMVISGVFLLFLQLCG 278


>SSO2761 [I] COG1960 Acyl-CoA dehydrogenases Sso Sulfolobus solfataricus
          Length = 398

 Score = 28.1 bits (61), Expect = 5.7,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 19  DLIGWGATLILLLTISSQVYEQWRSRSTQGVSHWLF 54
           DL G GA  + LLT + ++   W S ST  + +W+F
Sbjct: 68  DLGGQGADYLSLLTATEEIARIWPSFSTFLLINWMF 103


>FN2105 [S] COG3333 Uncharacterized protein conserved in bacteria Fnu
           Fusobacterium nucleatum
          Length = 494

 Score = 28.1 bits (61), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 63  GFVTYSLLQGDWVFVVSNVFLLLTALLGQVLYLRNRR 99
           G +TY+   G   FV+ N+F+L+  L G  L+ R  R
Sbjct: 350 GKITYTFFAG---FVIVNIFMLILGLFGSKLFARVSR 383