BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2493.p (266 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA5091 [E] COG3741 N-formylglutamate amidohydrolase Pae Pseudomo... 274 1e-73 CC0958 Non COG 244 1e-64 AGl1827 [E] COG3741 N-formylglutamate amidohydrolase Atu Agrobac... 239 4e-63 YPO1971 [E] COG3741 N-formylglutamate amidohydrolase Ype Yersini... 239 6e-63 SMb21164 [E] COG3741 N-formylglutamate amidohydrolase Sme Sinorh... 238 1e-62 >PA5091 [E] COG3741 N-formylglutamate amidohydrolase Pae Pseudomonas aeruginosa Length = 266 Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 143/259 (55%), Positives = 170/259 (65%), Gaps = 2/259 (0%) Query: 5 IFQLHQGSTPLLISMPHVGTRLPQDLRPAFSDIGLQVDDTDWHIAELYDFAIGLGASVLR 64 + +G PLLISMPH GTRL + + + DTDWHI LYDFA LGAS L Sbjct: 4 VLSFKRGRVPLLISMPHPGTRLTPAVDAGLVEEARALTDTDWHIPRLYDFAEELGASTLA 63 Query: 65 PEYSRYVIDLNRPADGQSLYPGQNTTGLCPQTTFDNLPLYRPGCAPDAAEVARRLSLYWQ 124 YSRYV+DLNRP+D + LY TTGL P T FD PLYR G AP A E R L+ W Sbjct: 64 AHYSRYVVDLNRPSDDKPLY-STATTGLYPDTLFDGRPLYREGMAPSAEERMRYLAEVWT 122 Query: 125 PYHAALQAELARLKALHGYALLWDAHSIRSVIPHLFEGELPVFNLGTASGSACAAGLGEE 184 PYH + ELARLKA GYALLWDAHSIRS +PHLF+G LP FNLGT +G++C L Sbjct: 123 PYHRTIAEELARLKAEFGYALLWDAHSIRSHVPHLFDGRLPDFNLGTNAGASCDPALAAR 182 Query: 185 LLALAQQLAPHSPAVLNGRFKGGYITRHYGQPAQRIHAVQLELAQRSYMQEQAPYALQDD 244 L A+ +S VLNGRFKGG+ITRHYGQP Q +HAVQLELAQ +YM EQAP+A + D Sbjct: 183 LEAVCAAAEGYS-HVLNGRFKGGHITRHYGQPEQHVHAVQLELAQCTYMDEQAPFAYRAD 241 Query: 245 LVAQIKPVLAQLVSRFLAF 263 L + V+ +L+ LA+ Sbjct: 242 LAEATRAVIRELLESLLAW 260 >CC0958 Non COG Length = 271 Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 124/232 (53%), Positives = 157/232 (67%), Gaps = 3/232 (1%) Query: 6 FQLHQGSTPLLISMPHVGTRLPQDLRPAFSDIGLQVDDTDWHIAELYDFAIGLGASVLRP 65 Q+ +GS PL+IS+PH GT +P D+ + L D DW + +LY FA LGA+++R Sbjct: 5 LQVVRGSAPLIISLPHTGTDIPPDIESQLASPWLARKDADWWVEQLYAFAENLGATLVRT 64 Query: 66 EYSRYVIDLNRPADGQSLYPGQNTTGLCPQTTFDNLPLYRPGCAPDAAEVARRLSLYWQP 125 SR VID+NR G SLYPGQ TT LCP TTFD PLYR G PDAAE+ R + Y++P Sbjct: 65 AISRTVIDVNRDPSGASLYPGQATTELCPTTTFDGEPLYRDG-GPDAAEIDHRRTTYFEP 123 Query: 126 YHAALQAELARLKALHGYALLWDAHSIRSVIPHLFEGELPVFNLGTASGSACAAGLGEEL 185 YHAAL++E+ RL+A+H +L++AHSIRS +P LFEGELP FNLGT SG +CA L + Sbjct: 124 YHAALRSEIERLRAVHPTVVLYEAHSIRSRVPRLFEGELPQFNLGTNSGQSCADALTVAV 183 Query: 186 LALAQQLAPHSPAVLNGRFKGGYITRHYGQPAQRIHAVQLELAQRSYMQEQA 237 A A V NGRFKGG+ TRHYGQPA +HA+Q+ELA R YM + A Sbjct: 184 EAACD--ASGLSRVTNGRFKGGWTTRHYGQPATGVHAIQMELACRGYMDDPA 233 >AGl1827 [E] COG3741 N-formylglutamate amidohydrolase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 311 Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 120/264 (45%), Positives = 167/264 (63%), Gaps = 7/264 (2%) Query: 6 FQLHQGSTPLLISMPHVGTRLPQDLRPAFSDIGLQVDDTDWHIAELYDFAIGL--GASVL 63 F LHQG++P++++ PH GT +P + D G DTDWHI LY GL A+ + Sbjct: 50 FMLHQGTSPVILAFPHTGTEVPPAIWDRLDDNGRIFADTDWHIHTLY---AGLLENATTV 106 Query: 64 RPEYSRYVIDLNRPADGQSLYPGQNTTGLCPQTTFDNLPLYRPGCAPDAAEVARRLSLYW 123 R + RYVID NR G SLYPGQNTTGL P+T FD P+++ G P+ A++A RL + Sbjct: 107 RATFHRYVIDANRDPAGVSLYPGQNTTGLVPETDFDGKPIWKTGAEPNEADIAHRLETFH 166 Query: 124 QPYHAALQAELARLKALHGYALLWDAHSIRSVIPHLFEGELPVFNLGTASGSACAAGLGE 183 PYHAAL AE+ R+K++HG A+L+D HSIRS IP LFEG+LP FN+GT G C + E Sbjct: 167 APYHAALAAEIERVKSIHGIAILYDCHSIRSHIPFLFEGKLPDFNIGTDMGKTCDPAI-E 225 Query: 184 ELLALAQQLAPHSPAVLNGRFKGGYITRHYGQPAQRIHAVQLELAQRSYMQ-EQAPYALQ 242 ++ A ++LNGRFKGG+ TRHYG+P +HA+Q+ELAQ +++Q E P+A Sbjct: 226 KIAVEVTAAAQGYDSILNGRFKGGWTTRHYGKPQTGVHAIQMELAQSTHLQNEHPPFAYD 285 Query: 243 DDLVAQIKPVLAQLVSRFLAFRPD 266 +++ L +++R F D Sbjct: 286 TGKAERLRTHLKTILTRMEKFALD 309 >YPO1971 [E] COG3741 N-formylglutamate amidohydrolase Ype Yersinia pestis Length = 268 Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 130/253 (51%), Positives = 156/253 (61%), Gaps = 2/253 (0%) Query: 11 GSTPLLISMPHVGTRLPQDLRPAFSDIGLQVDDTDWHIAELYDFAIGLGASVLRPEYSRY 70 G PLLIS+PH GTRL + + + DTDWHI LYDFA +GASVL +YSR Sbjct: 12 GKIPLLISIPHAGTRLTPAVEAGLTAAAQPLSDTDWHIHRLYDFAREMGASVLIGQYSRL 71 Query: 71 VIDLNRPADGQSLYPGQNTTGLCPQTTFDNLPLYRPGCAPDAAEVARRLSLYWQPYHAAL 130 V+DLNRP D Q LY TTGL P+T FD + G P E L+ WQPYH L Sbjct: 72 VVDLNRPQDDQPLY-ATATTGLFPETLFDGRACFEAGKTPSPNERQSYLTHIWQPYHQRL 130 Query: 131 QAELARLKALHGYALLWDAHSIRSVIPHLFEGELPVFNLGTASGSACAAGLGEELLALAQ 190 Q ELARL A GYALL DAHSI SVIP LF+G+LP N+GT ++C L E+L+A Q Sbjct: 131 QQELARLSAQFGYALLLDAHSIASVIPRLFDGQLPDLNIGTNDNASCLLSLTEQLIACCQ 190 Query: 191 QLAPHSPAVLNGRFKGGYITRHYGQPAQRIHAVQLELAQRSYMQEQAPYALQDDLVAQIK 250 + S VLNGRFKGGYITR YG P HAVQLELAQ +YM E PYA + D ++ Sbjct: 191 RQTAFS-HVLNGRFKGGYITRTYGLPQNHHHAVQLELAQLNYMSETEPYAYRPDRAIHLQ 249 Query: 251 PVLAQLVSRFLAF 263 +L Q ++ L + Sbjct: 250 QLLQQFITTMLTW 262 >SMb21164 [E] COG3741 N-formylglutamate amidohydrolase Sme Sinorhizobium meliloti Length = 271 Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 121/260 (46%), Positives = 168/260 (64%), Gaps = 7/260 (2%) Query: 4 AIFQLHQGSTPLLISMPHVGTRLPQDLRPAFSDIGLQVDDTDWHIAELYDFAIGL--GAS 61 A+F++ QGS+P+++ PH GT +P +R +D G + DTDWHI +LY GL A+ Sbjct: 2 AVFEVRQGSSPVILGFPHTGTDVPASIRERLNDNGRILADTDWHIHDLYQ---GLLPDAT 58 Query: 62 VLRPEYSRYVIDLNRPADGQSLYPGQNTTGLCPQTTFDNLPLYRPGCAPDAAEVARRLSL 121 +R + RYVID NR G SLYPGQNTTGL P+T FD LP+++ G P ++ RL Sbjct: 59 AVRATFHRYVIDANRDPAGVSLYPGQNTTGLVPETDFDGLPIWKEGEGPTEVDITERLRD 118 Query: 122 YWQPYHAALQAELARLKALHGYALLWDAHSIRSVIPHLFEGELPVFNLGTASGSACAAGL 181 + PYHAAL AE+AR+KA+HG +L+D HSIRS IP LFEG LP FN+GT G CA + Sbjct: 119 FHAPYHAALSAEIARVKAIHGVVVLYDCHSIRSHIPFLFEGRLPDFNIGTDMGKTCATEI 178 Query: 182 GEELLALAQQLAPHSPAVLNGRFKGGYITRHYGQPAQRIHAVQLELAQRSYMQEQA-PYA 240 +A +S +LNGRFKGG+ TRHYG+P Q +HA+Q+ELAQ +++ +A P+A Sbjct: 179 ERAAAEIAAGAECYS-HILNGRFKGGWTTRHYGRPEQGVHAIQMELAQSTHLATEAPPFA 237 Query: 241 LQDDLVAQIKPVLAQLVSRF 260 L +++ L ++ R Sbjct: 238 LDRAKADRLRRPLKAILERI 257