BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2421.p         (147 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

TM0733 [T] COG2172 Anti-sigma regulatory factor (Ser/Thr protein...    34   0.12 
Ta0423 [C] COG1526 Uncharacterized protein required for formate ...    28   6.7  

>TM0733 [T] COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase)
           Tma Thermotoga maritima
          Length = 136

 Score = 33.9 bits (76), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 22  LLRELIGLTGQPDATVATLELQLGEIFTRTLIDPETPDR-HLAITALLPRCEQPHYLPRM 80
           +LR+ + +    D+ +  +E+ LGEI    +      D     I +   + E  H L R 
Sbjct: 22  VLRDFLQMHESSDSLIVDMEIVLGEILANVIKHTYKNDETKRIIVSYTLKDEVFHMLVRD 81

Query: 81  FSPPGAP----PLPPQTDFLWHADQGCYIV 106
           F PP  P    P+PP  +       G YI+
Sbjct: 82  FGPPVDPTRLKPMPPDLENPREGGYGFYII 111


>Ta0423 [C] COG1526 Uncharacterized protein required for formate
           dehydrogenase activity Tac Thermoplasma acidophilum
          Length = 282

 Score = 28.1 bits (61), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)

Query: 20  SRLLRELIGLTGQPDATVATLELQLGEIFTRTLIDPET 57
           SRLL    G+ G+  +T+A L ++ G+I T T ID ET
Sbjct: 119 SRLLNSACGICGR--STIADLLIRHGKIGTDTRIDSET 154