BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2415.p         (103 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGc4598 [I] COG1960 Acyl-CoA dehydrogenases Atu Agrobacterium tu...    28   5.1  
aq_854 [R] COG0457 FOG Aae Aquifex aeolicus                            28   5.9  

>AGc4598 [I] COG1960 Acyl-CoA dehydrogenases Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 436

 Score = 28.1 bits (61), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 24/50 (48%)

Query: 17  AIGLVWGYFSAYQYEAAHELAQGCLQVWPDDPKLFLMASYAAAELLEPVD 66
           + G V G  SA+Q+  A    +    VW ++P   L  SYA  ++ E  D
Sbjct: 115 STGWVAGLLSAHQWLLAMFPEEAQADVWGENPDALLCGSYAPVKMAEAAD 164


>aq_854 [R] COG0457 FOG Aae Aquifex aeolicus
          Length = 545

 Score = 27.7 bits (60), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 18/24 (75%)

Query: 29 QYEAAHELAQGCLQVWPDDPKLFL 52
          +YE A ELA+  L+ +PD+P+ ++
Sbjct: 64 EYEKAKELAKEFLETYPDEPQAYI 87