BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2359.p         (72 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

msl8750 Non COG                                                        82   3e-16
SMa0811 [C] COG1145 Ferredoxin Sme Sinorhizobium meliloti              77   8e-15
PA0362 [C] COG1145 Ferredoxin Pae Pseudomonas aeruginosa               73   1e-13
RSc0391 [C] COG1145 Ferredoxin Rso Ralstonia solanacearum              70   9e-13
NMB0123 [C] COG1145 Ferredoxin Nme Neisseria meningitidis MC58         70   2e-12

>msl8750 Non COG
          Length = 64

 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 47/62 (75%)

Query: 1  MAYKIVASQCTGCSACEPECPNVAIREKNGIFVIDPKKCTECMGHFDEPQCVAVCPVDGT 60
          MA+KI+ASQCT C ACE ECP+ AI+ K   +VIDPKKCTEC G F+  QC +VCPV  T
Sbjct: 1  MAFKIIASQCTQCGACEFECPSGAIKFKGETYVIDPKKCTECEGTFETQQCASVCPVSKT 60

Query: 61 CV 62
          CV
Sbjct: 61 CV 62


>SMa0811 [C] COG1145 Ferredoxin Sme Sinorhizobium meliloti
          Length = 64

 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 43/62 (69%)

Query: 1  MAYKIVASQCTGCSACEPECPNVAIREKNGIFVIDPKKCTECMGHFDEPQCVAVCPVDGT 60
          MA+KI+ASQCT C ACE ECP  A+  K   +VIDP KC EC G FD  QC +VCPV  T
Sbjct: 1  MAFKIIASQCTQCGACEFECPRGAVNFKGEKYVIDPTKCNECKGGFDTQQCASVCPVSNT 60

Query: 61 CV 62
          CV
Sbjct: 61 CV 62


>PA0362 [C] COG1145 Ferredoxin Pae Pseudomonas aeruginosa
          Length = 83

 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 40/58 (68%), Gaps = 1/58 (1%)

Query: 1  MAYKIVASQCTGCSACEPECPNVAIREKNGIFVIDPKKCTECMGHFDEPQCVAVCPVD 58
          M+ KI    C  C  CEPECPN AI +   I+VIDP  CTEC+GH+DEPQC  VCPVD
Sbjct: 1  MSLKI-TDDCINCDVCEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVD 57


>RSc0391 [C] COG1145 Ferredoxin Rso Ralstonia solanacearum
          Length = 82

 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 38/54 (70%)

Query: 5  IVASQCTGCSACEPECPNVAIREKNGIFVIDPKKCTECMGHFDEPQCVAVCPVD 58
          ++  +C  C  CEPECPN AI     I+VIDP KCTEC+GHFD PQC  VCPV+
Sbjct: 4  MITDECINCDVCEPECPNGAISMGPEIYVIDPGKCTECVGHFDAPQCQQVCPVE 57


>NMB0123 [C] COG1145 Ferredoxin Nme Neisseria meningitidis MC58
          Length = 83

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 5  IVASQCTGCSACEPECPNVAIREKNGIFVIDPKKCTECMGHFDEPQCVAVCPVDGTCVID 64
           +  +C  C  CEPECPN AI +   I+ I+P  CT+C+GH+DEPQC  VCPVD   +ID
Sbjct: 4  FITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDCI-LID 62

Query: 65 NAQPR 69
             P 
Sbjct: 63 EEHPE 67