BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2358.p         (124 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

all1431 [S] COG0316 Uncharacterized conserved protein Nos Nostoc...    73   1e-13
BS_yutM [S] COG0316 Uncharacterized conserved protein Bsu Bacill...    64   6e-11
mll5942 [S] COG0316 Uncharacterized conserved protein Mlo Mesorh...    63   1e-10
SMc00301 [S] COG0316 Uncharacterized conserved protein Sme Sinor...    62   2e-10
XF2562 [S] COG0316 Uncharacterized conserved protein Xfa Xylella...    60   9e-10

>all1431 [S] COG0316 Uncharacterized conserved protein Nos Nostoc sp. PCC
           7120
          Length = 123

 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 4/106 (3%)

Query: 1   MNITITPAAEKFMRRMVR---FNGGSVQSGFRLKVSAGGCSGLSSEFSVQAQPTPGDVSF 57
           M +T+T  AE  +R  +R    +      G R+ V  GGCSG      V +QP P D+  
Sbjct: 1   MTVTLTEKAEFRLRAFLRGSAKDANETTKGIRVSVKDGGCSGYEYLMDVTSQPQPDDLVT 60

Query: 58  DCNGLAVFLPAESRLLLEGVTIDFADTLSESGLTFRNPNAPAASCG 103
               + V++ A+S  LLEG+ IDF + L ESG  F NPNA  ++CG
Sbjct: 61  QQGSVLVYVDAKSAPLLEGIVIDFVEGLVESGFKFTNPNA-TSTCG 105


>BS_yutM [S] COG0316 Uncharacterized conserved protein Bsu Bacillus subtilis
          Length = 120

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 4/113 (3%)

Query: 3   ITITPAAEKFMRRMVRFNGGSVQSGF-RLKVSAGGCSGLSSEFSVQAQPTPGDVSFDCNG 61
           +TIT AA   ++ M++ +    ++ F R+ V  GGCSGLS     + + +  D  FD +G
Sbjct: 5   VTITEAAALHIKDMMKEH--EEENAFLRVGVKGGGCSGLSYGMGFEHEKSESDSVFDQHG 62

Query: 62  LAVFLPAESRLLLEGVTIDFADTLSESGLTFRNPNAPAASCGTHGSTPPATAA 114
           + V +  ES  ++ G  ID+  ++   G T  NPNA  ASCG   S   AT A
Sbjct: 63  ITVLVDKESLDIMNGTVIDYKQSMLGGGFTIDNPNA-IASCGCGSSFRTATNA 114


>mll5942 [S] COG0316 Uncharacterized conserved protein Mlo Mesorhizobium
           loti
          Length = 106

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 1/79 (1%)

Query: 26  SGFRLKVSAGGCSGLSSEFSVQAQPTPGDVSFDCNGLAVFLPAESRLLLEGVTIDFADTL 85
            GFR+ V AGGC+GL     +++    GD   + +G  VF+ A S+  L G+T+DF   L
Sbjct: 24  EGFRIMVEAGGCAGLKYLMGLESVSREGDAIMETDGFKVFVDANSQPHLAGMTVDFVTDL 83

Query: 86  SESGLTFRNPNA-PAASCG 103
             SG  F NPNA    +CG
Sbjct: 84  ESSGFVFDNPNARDKCACG 102


>SMc00301 [S] COG0316 Uncharacterized conserved protein Sme Sinorhizobium
           meliloti
          Length = 130

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 2/113 (1%)

Query: 3   ITITPAAEKFMRRMVRFNGGSVQSGFRLKVSAGGCSGLSSEFSVQAQPTPGDVSFDCNGL 62
           +++T AA   +R +V   GG  + G R+ +  GGC+G+     + ++P   D   +  G 
Sbjct: 6   MSLTDAAASRVRSIVENAGGEAK-GIRISIKKGGCAGMEYAVDLVSEPNSKDDLIEQQGA 64

Query: 63  AVFLPAESRLLLEGVTIDFADTLSESGLTFRNPNAPAA-SCGTHGSTPPATAA 114
            V++  E+ L L G  +DF  T   SG TF NPN  +A  CG      PA  A
Sbjct: 65  KVWVAPEAVLYLLGTQMDFETTTLRSGFTFNNPNQTSACGCGESVELKPADLA 117


>XF2562 [S] COG0316 Uncharacterized conserved protein Xfa Xylella
           fastidiosa 9a5c
          Length = 112

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 5/104 (4%)

Query: 1   MNITITPAAEKFMRRMVRFNGGSVQSGFRLKVSAGGCSGLSSEFSVQAQPTPGDVSFDCN 60
           M +T+TP A   +RR ++   G++  G R  V+  GCSG      +  +   GD  F+ +
Sbjct: 1   MTVTLTPVALDRVRRFIQQTPGTL--GLRFGVTRTGCSGWGHFTDLACEQREGDSVFEQD 58

Query: 61  GLAVFLPAESRLLLEGVTIDFADT-LSESGLTFRNPNAPAASCG 103
           G+ +F+ A S  L++G  IDF+   LSE+  TF NPNA A  CG
Sbjct: 59  GVRIFVDAHSLPLVDGTCIDFSKRGLSET-FTFVNPNA-AVECG 100