BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2332.p (250 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1862 [P] COG4149 ABC-type molybdate transport system, permease... 295 6e-80 CC0329 Non COG 206 4e-53 Cj0301c [P] COG4149 ABC-type molybdate transport system, permeas... 168 1e-41 aq_086 [P] COG4149 ABC-type molybdate transport system, permease... 152 6e-37 jhp0426 [P] COG4149 ABC-type molybdate transport system, permeas... 136 6e-32 >PA1862 [P] COG4149 ABC-type molybdate transport system, permease component Pae Pseudomonas aeruginosa Length = 228 Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 153/213 (71%), Positives = 184/213 (86%) Query: 3 LTAEDWSAVRLTLSLASIVTVLLLLLGTPLAWWLARTRSGWRHGVAAVVALPLVLPPAVL 62 L + D +A+ LT+ LAS+ T+LLLL+GTP+AWWLARTRS + + AVVALPLVLPP V+ Sbjct: 5 LDSTDLAAIWLTIELASLTTLLLLLIGTPIAWWLARTRSWLKGPIGAVVALPLVLPPTVI 64 Query: 63 GFYLLVLMGPQGPVGQLTQALGLGLLPFSFGGLVLASLLYSMPFVVQPLQNAFEAMGERP 122 GFYLLV MGP G +GQLTQ+LGLG LPF+F GLV+ S+ YS+PFVVQPLQNAFEA+GE+P Sbjct: 65 GFYLLVSMGPNGFIGQLTQSLGLGTLPFTFAGLVVGSVFYSLPFVVQPLQNAFEAIGEKP 124 Query: 123 MEVAATLRASPLDAFFTVAVPLAGPGFLTAAVLGFAHTVGEFGVVLMIGGNIPGKTRVLS 182 +E AATLRASP+D FF+V +PLA PGF+TAA+LGFAHTVGEFGVVLMIGGNIP KTRV+S Sbjct: 125 LEAAATLRASPVDRFFSVVLPLARPGFVTAAILGFAHTVGEFGVVLMIGGNIPEKTRVVS 184 Query: 183 MQIYDHVEAFEYAQAHRLAGAMLVFSFLVLLVM 215 +QI+DHVEA EYAQAH LAG M+ FSF+VLL + Sbjct: 185 VQIFDHVEAMEYAQAHWLAGGMVAFSFVVLLAL 217 >CC0329 Non COG Length = 224 Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 116/189 (61%), Positives = 146/189 (77%) Query: 13 LTLSLASIVTVLLLLLGTPLAWWLARTRSGWRHGVAAVVALPLVLPPAVLGFYLLVLMGP 72 LT LA I T+LLLLL TPL+WWLAR RS R V A+VALP+VLPP VLGFYLL+ +GP Sbjct: 7 LTAKLAGITTLLLLLLATPLSWWLARGRSPLRTPVTAIVALPIVLPPTVLGFYLLIALGP 66 Query: 73 QGPVGQLTQALGLGLLPFSFGGLVLASLLYSMPFVVQPLQNAFEAMGERPMEVAATLRAS 132 P+ L Q G+ L F+F GLV+ SL+YS+PF VQPL+NAF A+G+ P+E AA+L AS Sbjct: 67 NSPLMALLQPFGVRTLAFTFEGLVIGSLIYSLPFAVQPLRNAFLAIGDEPLEAAASLGAS 126 Query: 133 PLDAFFTVAVPLAGPGFLTAAVLGFAHTVGEFGVVLMIGGNIPGKTRVLSMQIYDHVEAF 192 + F+ VA+PLA PG++ AA+L FAHTVGEFGVV+M+GGNIPG+T VLS +IY VEA Sbjct: 127 RAETFWRVALPLALPGYVAAAILTFAHTVGEFGVVMMLGGNIPGETTVLSTEIYRLVEAL 186 Query: 193 EYAQAHRLA 201 E+ +AHRL+ Sbjct: 187 EWGEAHRLS 195 >Cj0301c [P] COG4149 ABC-type molybdate transport system, permease component Cje Campylobacter jejuni Length = 224 Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 133/211 (63%), Gaps = 2/211 (0%) Query: 11 VRLTLSLASIVTVLLLLLGTPLAWWLARTRSGWRHGVAAVVALPLVLPPAVLGFYLLVLM 70 + LT LA I T +L +G LA+ L+ R ++ + + ++LPL+LPP+VLGFYLLV Sbjct: 10 LYLTFKLAFITTFILFFIGVFLAYLLSFVRFPFKTILQSFISLPLILPPSVLGFYLLVTF 69 Query: 71 GPQGPVGQ-LTQALGLGLLPFSFGGLVLASLLYSMPFVVQPLQNAFEAMGERPMEVAATL 129 +GQ L + L L+ FSF GLV ASL++S+PF+V PLQ+AF ++ ++ + +L Sbjct: 70 SANSFLGQVLKEYFNLSLV-FSFEGLVFASLIFSLPFMVNPLQSAFSSINPNLLDASYSL 128 Query: 130 RASPLDAFFTVAVPLAGPGFLTAAVLGFAHTVGEFGVVLMIGGNIPGKTRVLSMQIYDHV 189 S + F V +P + G +A + FAHTVGEFGVV+MIGG+ G+T V S+ IYD + Sbjct: 129 GKSKIYTLFRVILPNSKAGIFSACAMSFAHTVGEFGVVMMIGGHKQGETLVASIAIYDEL 188 Query: 190 EAFEYAQAHRLAGAMLVFSFLVLLVMMRLGR 220 E Y+ AH+ A + +FSFLVL + + + Sbjct: 189 EILNYSLAHQYAFILFIFSFLVLFSLYFINK 219 >aq_086 [P] COG4149 ABC-type molybdate transport system, permease component Aae Aquifex aeolicus Length = 220 Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 76/153 (49%), Positives = 107/153 (69%) Query: 47 VAAVVALPLVLPPAVLGFYLLVLMGPQGPVGQLTQALGLGLLPFSFGGLVLASLLYSMPF 106 V A+V LPLVLPP VLGFYL++L P+ P G+L Q++ L FSF GLV+AS++YS+P Sbjct: 41 VVALVTLPLVLPPTVLGFYLILLFSPESPFGKLVQSILGKTLLFSFEGLVVASVIYSLPL 100 Query: 107 VVQPLQNAFEAMGERPMEVAATLRASPLDAFFTVAVPLAGPGFLTAAVLGFAHTVGEFGV 166 V PL +A E + + + + ++ FF V +PL+ G +T+ V+ FA+T+GEFGV Sbjct: 101 AVLPLTSAMEKIPKELIYTSYVFGYGKVETFFRVILPLSLNGLITSVVMSFANTMGEFGV 160 Query: 167 VLMIGGNIPGKTRVLSMQIYDHVEAFEYAQAHR 199 VLM+GGNIPG+T+ LS+ IYD V+A +Y AHR Sbjct: 161 VLMVGGNIPGETQTLSIFIYDAVQALDYKTAHR 193 >jhp0426 [P] COG4149 ABC-type molybdate transport system, permease component jHp Helicobacter pylori J99 Length = 224 Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 84/221 (38%), Positives = 132/221 (59%) Query: 6 EDWSAVRLTLSLASIVTVLLLLLGTPLAWWLARTRSGWRHGVAAVVALPLVLPPAVLGFY 65 E +RL+ SLA I T++LL +G L ++L+ R+ +V +PLVLPP+VLGFY Sbjct: 4 EFLITMRLSFSLALITTLILLPIGIFLGYFLSLKRNLLTSLTETLVYMPLVLPPSVLGFY 63 Query: 66 LLVLMGPQGPVGQLTQALGLGLLPFSFGGLVLASLLYSMPFVVQPLQNAFEAMGERPMEV 125 LL++ P +G Q + L FSF GL+L S+++S+PF+V P+++A ++ E Sbjct: 64 LLLIFSPSSFLGAFLQDVLNVKLVFSFQGLILGSVIFSLPFMVSPIKSALISLPTSLKEA 123 Query: 126 AATLRASPLDAFFTVAVPLAGPGFLTAAVLGFAHTVGEFGVVLMIGGNIPGKTRVLSMQI 185 + +L F V +P P L A + F HT+GEFGVV+M+GG+I G+TRV S+ I Sbjct: 124 SYSLGKGEYYTLFFVLLPNIKPSVLMAIITTFMHTIGEFGVVMMLGGDILGETRVASITI 183 Query: 186 YDHVEAFEYAQAHRLAGAMLVFSFLVLLVMMRLGRAGKTRL 226 ++ EA Y++AH+ A + + SF +L V + L + + L Sbjct: 184 FNEAEALNYSKAHQYALTLTLISFSLLFVTLFLNKKQSSFL 224