BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2231.p (439 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2386 [Q] COG3486 Lysine/ornithine N-monooxygenase Pae Pseudomo... 412 e-114 SPAC23G3.03 [Q] COG3486 Lysine/ornithine N-monooxygenase Spo Sch... 223 1e-57 RSp1425 [Q] COG3486 Lysine/ornithine N-monooxygenase Rso Ralston... 211 3e-54 all0392 [Q] COG3486 Lysine/ornithine N-monooxygenase Nos Nostoc ... 197 4e-50 VNG6214G [Q] COG3486 Lysine/ornithine N-monooxygenase Hbs Haloba... 186 7e-47 >PA2386 [Q] COG3486 Lysine/ornithine N-monooxygenase Pae Pseudomonas aeruginosa Length = 443 Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust. Identities = 216/415 (52%), Positives = 271/415 (65%), Gaps = 5/415 (1%) Query: 3 IHDLIGIGFGPSNIALAIALQEQSQSGQRPLDAFFIDKQTSFAWHPGMLLSHAHMQISYL 62 +HDLIG+GFGPSNIALAIALQE++Q+ Q L+ F+DKQ + WH L+S + +QIS+L Sbjct: 10 VHDLIGVGFGPSNIALAIALQERAQA-QGALEVLFLDKQGDYRWHGNTLVSQSELQISFL 68 Query: 63 KDLVTLRNPRSRFTFVNYLHEHGRLPDFINLKSFFPSRHEFSDYLSWAARHFEAQCAYGE 122 KDLV+LRNP S ++FVNYLH+H RL DFINL +F+P R EF+DYL W A HF+ Q YGE Sbjct: 69 KDLVSLRNPTSPYSFVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGE 128 Query: 123 EVFDILPELHEAQGQLLRVRSRDRSGAVRERLARNLVVSIGGTPLLPPCFRALKRDKRIF 182 EV I P L Q + LRV SR+ G R R LVVS GGTP +P FRALK D R+F Sbjct: 129 EVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGTPRIPQVFRALKGDGRVF 188 Query: 183 HSNSYLQGIAANP----QARKIAIIGAGQSAAEIFLDLHNRSDITQIDLIMRGRAMHPSD 238 H + YL+ +A P + KIAIIG GQSAAE F+DL++ Q D+I+R A+ P+D Sbjct: 189 HHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPAD 248 Query: 239 DSPFVNGIFNADYTDHIYHKDDATRAELLAEFRRTNYAAPDLALIEQIFKIFYEERITRG 298 DSPFVN +F +TD IY ++ A R LL E+ TNY+ D LIE+I+ +FY ++++ Sbjct: 249 DSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGI 308 Query: 299 TRHHLLARHEVRRVDTHGDGIELHLRDLEQAMEVSTRYDAVILATGYERQQHRQLLGSLG 358 RH V R GIEL LRD YDAVILATGYERQ HRQLL L Sbjct: 309 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLA 368 Query: 359 DNLGHFVVDRDYRLLTAPDFRPRIFLQGACEASHGLSDTLLSVTAVRVQEIIDAL 413 + LG + RDYRL T + I+ QG +ASHGLSDTLLSV VR +EI +L Sbjct: 369 EYLGDHEIGRDYRLQTDERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSL 423 >SPAC23G3.03 [Q] COG3486 Lysine/ornithine N-monooxygenase Spo Schizosaccharomyces pombe Length = 431 Score = 223 bits (567), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 138/433 (31%), Positives = 232/433 (53%), Gaps = 23/433 (5%) Query: 5 DLIGIGFGPSNIALAIALQEQSQSGQRPLDAFFIDKQTSFAWHPGMLLSHAHMQISYLKD 64 DL IGFGP++++ IAL + S+ + +K +F+WH GML+ ++MQIS++KD Sbjct: 6 DLAIIGFGPASLSFLIALHDHSEEPLKNKKIRVFEKLPTFSWHEGMLIPGSNMQISFVKD 65 Query: 65 LVTLRNPRSRFTFVNYLHEHG--RLPDFINLKSFFPSRHEFSDYLSWAARHFEAQCAYGE 122 L T R+P S FTF+NYLH HG RL F+N+ + PSR+E+ DYL WAA HF Y Sbjct: 66 LATPRDPTSYFTFLNYLHSHGQERLSGFLNMSTLEPSRYEYHDYLCWAASHFSKFVEYNA 125 Query: 123 EVFDILPELH-EAQGQLLRVRSRDRSGAVRERLARNLVVSIGGTPLLPPCFRALKRDKRI 181 + +LH +A L V D + A+N++++ G P +PP ++++ I Sbjct: 126 NI----NKLHYDAATDLYIVGHGD-----TQWQAKNIIITTGCQPYIPPLYKSVD-SPLI 175 Query: 182 FHSNSYL----QGIAANPQARKIAIIGAGQSAAEIFLDLHNRSD-ITQIDLIMRGRAMHP 236 HS+ ++ Q + N + I ++G GQSAAEI+ H D T + + R A P Sbjct: 176 VHSSKFMSDHSQKLLRNSK-HGILVVGCGQSAAEIWKHCHYSLDPKTPLAMCFRNLAPVP 234 Query: 237 SDDSPFVNGIFNADYTDHIYHK-DDATRAELLAEFRRTNYAAPDLALIEQIFKIFYEERI 295 SD SPFVN ++ + H ++ R + L+ R TNY+ +L+E++FK Y +++ Sbjct: 235 SDSSPFVNSLYFDSHNSHWWYNLPTEARLKGLSVGRTTNYSVVKESLLEEMFKECYLQKL 294 Query: 296 TRGTR-HHLLARHEVRRVDTHGDGIELHLRD-LEQAMEVSTR-YDAVILATGYERQQHRQ 352 G H ++ +++ + GD + + L ++++ + TR D + +ATGY+ + Sbjct: 295 RYGQEFHQIMGDTDIQSIKNEGDHLVVQLTSQMDKSKKPETRKIDVLYVATGYDHESFDV 354 Query: 353 LLGSLGDNLGHFVVDRDYRLLTAPDFRPRIFLQGACEASHGLSDTLLSVTAVRVQEIIDA 412 L+ SL N + +Y +L AP + ++++ G HG+ +TLLS A+R + Sbjct: 355 LMSSLFPNSQGAQISEEYCVLNAPSKQGKVYVAGITSNQHGIGETLLSWAAIRAGGLAKE 414 Query: 413 LCASNEAAATSPS 425 L ++ A P+ Sbjct: 415 LFGPSKPTARVPA 427 >RSp1425 [Q] COG3486 Lysine/ornithine N-monooxygenase Rso Ralstonia solanacearum Length = 445 Score = 211 bits (536), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 153/446 (34%), Positives = 229/446 (51%), Gaps = 46/446 (10%) Query: 4 HDLIGIGFGPSNIALAIALQEQSQSGQRPLDAFFIDKQTSFAWHPGMLLSHAHMQISYLK 63 +D++GIGFGP+N+ALAIAL+E +G F++++ S W P MLL + +Q + Sbjct: 5 YDVVGIGFGPANLALAIALEEAGFAGS----CLFLERRPSPQWQPEMLLPRSDIQNHPCR 60 Query: 64 DLVTLRNPRSRFTFVNYLHEHGRLPDFINLKSFFPSRHEFSDYLSWAARHFEAQCAYGEE 123 DLVT RNPRSR+TF+N+L E+GRL + +NL FP R E++ Y+SWAA F + Y Sbjct: 61 DLVTPRNPRSRYTFMNFLFENGRLFEHLNLGIEFPLRVEYAQYVSWAAGFFADRVRYDTP 120 Query: 124 VFDILPELHEAQGQLLRVRSRDRSGAVRERLARNLVVSIGGTPLLPPCFRALKRDKRIFH 183 V L L G R+ + D + AR++VV+ G TPL+P F++L + R FH Sbjct: 121 VTQ-LSRLPGDSG--YRIETADG----QRYTARSVVVAPGRTPLIPQAFQSLP-NARAFH 172 Query: 184 SN---SYLQGIAANPQARKIAIIGAGQSAAEIFLDLHNRSDITQIDLIMRGRAMHPSDDS 240 S L+ + + R IA++G QSAAEI + L + +I IMRG D S Sbjct: 173 LTELASRLEQLEQTREIRHIAVLGGSQSAAEIVVHLRAKYPQARISNIMRGYGYRLKDTS 232 Query: 241 PFVNGIFNADYTDHIYHKDDATRAELLAEFRRTNYAAPDLALIEQIFKIFYEERITRGTR 300 F ++ ++ D+ Y + +L TNY+A D +I +++ YE+R+ R Sbjct: 233 QFSEHVYFPEFVDYYYGISKDAKRQLNRHLHYTNYSAVDGDVIRELYLTLYEDRLRNENR 292 Query: 301 HHLLARHEVRRVDTHGDGIELHLRDLEQAMEVST-RYDAVILATGYERQQHRQLLGSLGD 359 +L+ EV G + + LR++ + + DAV+LATG+ R L LG+ Sbjct: 293 IDMLSLSEVVAARDDGTHVSIDLREVNTGERTTLGKVDAVVLATGF-----RNL--GLGE 345 Query: 360 N-------------------LGHFVVDRDYRLLTAPD--FRPRIFLQGACEASHGLSDT- 397 N G ++RDY LL P P ++L G CE+SHG D Sbjct: 346 NEERVPPLLAGLADDLAMDDDGCLHIERDYALLPRPGSALAP-LYLNGLCESSHGYGDAG 404 Query: 398 LLSVTAVRVQEIIDALCASNEAAATS 423 S+ A+R EI +L A EAA + Sbjct: 405 SFSLLALRAAEIQRSLSAHLEAAGPA 430 >all0392 [Q] COG3486 Lysine/ornithine N-monooxygenase Nos Nostoc sp. PCC 7120 Length = 427 Score = 197 bits (501), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 134/424 (31%), Positives = 204/424 (48%), Gaps = 27/424 (6%) Query: 3 IHDLIGIGFGPSNIALAIALQEQSQSGQRPLDAFFIDKQTSFAWHPGMLLSHAHMQISYL 62 ++DLIGIG GP N+ LA L+ ++ + + F++++ F WHPG+LL +Q+ +L Sbjct: 5 VYDLIGIGLGPFNLGLAALLEPITE-----IKSLFLEQKPQFQWHPGLLLEGTTIQVPFL 59 Query: 63 KDLVTLRNPRSRFTFVNYLHEHGRLPDFINLKSFFPSRHEFSDYLSWAARHFEAQCAYGE 122 DLVT+ P S+F+F++YL RL +F + F R E++DY W A+ C +GE Sbjct: 60 ADLVTMAEPSSKFSFLSYLKAKSRLYNFYFWEEFHIPRREYNDYCQWVAKQL-PNCYFGE 118 Query: 123 EVFDILPELHEAQGQLLRVRSRDRSGAVRERLARNLVVSIGGTPLLPPCFRALKRDKRIF 182 +V I + E + + SG RNLV+ +G P +PPCFR L + +F Sbjct: 119 QVKSI--DWDEKAQEFI------VSGTNFIYRCRNLVLGVGTVPYIPPCFRDLVSEN-VF 169 Query: 183 HSNSYLQGIAANPQARKIAIIGAGQSAAEIFLDLHNRSDI--TQIDLIMRGRAMHPSDDS 240 HS+ +L + QA+ I +IG+GQSAAE+F +L + ++ R P + S Sbjct: 170 HSSKFLHQKVSCRQAKSITVIGSGQSAAEVFYELLQEQENYDYHLEWHTRSSGFFPMEYS 229 Query: 241 PFVNGIFNADYTDHIYHKDDATRAELLAEFRRTNYAAPDLALIEQIFKIFYEERITRGTR 300 F+ DY + YH R ELL + + Y I +I+ + YE + Sbjct: 230 KLGLEHFSPDYIHYFYHLQPEQRDELLTK-QGLLYKGISFNTIAKIYDLLYERSVADNYP 288 Query: 301 H-HLLARHEVRRVDTHGDGIELHLRDLEQAMEVSTRYDAVILATGYERQQH------RQL 353 LL+ EV+ ++ +G L R Q D +ILATGY R L Sbjct: 289 DVKLLSGVEVKDIEPTAEGYRLTYRHSHQHQPFIHESDRIILATGYHHATPNFMADIRDL 348 Query: 354 LGSLGDNLGHFVVDRDYRLLTAPDFRPRIFLQGACEASHGLSDTLLSVTAVRVQEIIDAL 413 L D G + V+ DY L D RIF+Q A +HG+ L + R II++L Sbjct: 349 LQ--WDEKGRYKVNFDYHLSLTQDIPNRIFVQNAELHTHGIGAPDLGLGCYRNSVIINSL 406 Query: 414 CASN 417 N Sbjct: 407 TGRN 410 >VNG6214G [Q] COG3486 Lysine/ornithine N-monooxygenase Hbs Halobacterium sp. NRC-1 Length = 477 Score = 186 bits (473), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 138/436 (31%), Positives = 208/436 (47%), Gaps = 34/436 (7%) Query: 3 IHDLIGIGFGPSNIALAIALQEQSQSGQRPLDAFFIDKQTSFAWHPGMLLSHAHMQISYL 62 +HDL+G+G GP N+ LA ++ S PLDA F++++ F WH GML+ +++ +L Sbjct: 5 VHDLVGVGLGPFNLGLAALIE---GSDDVPLDAAFLEQKPEFVWHDGMLIEGTTLEVPFL 61 Query: 63 KDLVTLRNPRSRFTFVNYLHEHGRLPDFINLKSFFPSRHEFSDYLSWAARHFEAQCAYGE 122 DLVTL +P + ++++NYL EH RL +F ++F R E++DY W A A + Sbjct: 62 ADLVTLADPTNPYSYLNYLREHDRLYEFYFYETFQIPRREYNDYCQWVAESLAAP-RFSR 120 Query: 123 EVFDILPELHEAQGQLLRV----------RSRDRSGAVRERLARNLVVSIGGTPLLPPCF 172 V DI +A RV + D + AR+LVV +G P +PP F Sbjct: 121 RVVDITAIDDDATPANFRVTAVEPADEARSATDDDAPTHQYRARDLVVGVGSRPYVPPAF 180 Query: 173 RALKRDKRIFHSNSYLQGIAANPQARKIAIIGAGQSAAEIFLDLHNRSDIT----QIDLI 228 R L +FH+ +Y + AA A +A+IG+GQSAAE+ DL R + ++D + Sbjct: 181 RDLPA-PDVFHTAAYREHRAAVCDADSVAVIGSGQSAAEVVHDLLTRRSTSDRSPRVDWV 239 Query: 229 MRGRAMHPSDDSPFVNGIFNADYTDHIYHKDDATRAELLAEFRRTNYAAPDLALIEQIFK 288 R P + S F +YTD++Y + EL+ + Y D +I+ Sbjct: 240 TRSAGFFPMEYSKLGLQHFTPEYTDYVYDLPQPVKDELIPN-QDILYKGIDPETSTRIYD 298 Query: 289 IFYEERI-TRGTRHHLLARHEVRRVDTHGDG---IELHLRDLEQAMEVSTRYDAVILATG 344 YE+ I R ++A EV V+ G G ++ R + T DAVIL TG Sbjct: 299 TLYEQSIGGRDPNVGMIAATEVGAVEPTGGGRYRVDCRHRQTDTGFAFET--DAVILGTG 356 Query: 345 YERQQHRQLLGSLG-----DNLGHFVVDRDYRLLTAPDFRPRIFLQGACEASHGLSDTLL 399 Y R L SL D+ VDR+Y + D +F+Q A +HG+ L Sbjct: 357 YHRPT-PGFLSSLEPRLARDDQDRLAVDREYGV--GGDLPGGLFVQNAELHTHGVGAPDL 413 Query: 400 SVTAVRVQEIIDALCA 415 + A R I+D L A Sbjct: 414 GLGAYRNAVILDRLLA 429