BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2176.p (795 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO0518 [L] COG0417 DNA polymerase elongation subunit (family B)... 1083 0.0 PA1886 Non COG 1083 0.0 polB [L] COG0417 DNA polymerase elongation subunit (family B) Ec... 1016 0.0 ZpolB [L] COG0417 DNA polymerase elongation subunit (family B) E... 1014 0.0 ECs0064 [L] COG0417 DNA polymerase elongation subunit (family B)... 1014 0.0 >YPO0518 [L] COG0417 DNA polymerase elongation subunit (family B) Ype Yersinia pestis Length = 789 Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust. Identities = 530/788 (67%), Positives = 630/788 (79%), Gaps = 6/788 (0%) Query: 11 RAGFIVSRHWRDTPAGVEIELWLATDEGPQCLRLPPQPAVAFVPQEQAERVQALIQGERG 70 R GF+++RHWRDTPAG E+E WLATDEGPQ +RLPPQP+VAF+P EQ +R + +++ ER Sbjct: 5 RQGFLLTRHWRDTPAGTEVEFWLATDEGPQHVRLPPQPSVAFIPAEQQQRAETVLRAERH 64 Query: 71 MELRPLDHLKDLSQRPVLGLYARQYRKLLKMEKTLLAAGIAVYEADIRPPERYLMERFIN 130 +LRPL L D QRPVLGLY Q+R+L+++EK L +G+ VYE DIRPPER+LMERFI Sbjct: 65 WQLRPLA-LTDFHQRPVLGLYCTQHRQLIRLEKRLRESGVNVYEGDIRPPERFLMERFIT 123 Query: 131 APLAFQGVDDGHGALVEARIRPLPGYRPPLKLASLDIETSWQGELYSIAIEGCGQRSVYA 190 AP+ F G ++ HG L+ +++P YRP LKL SLDIETS GELY I +EGCGQR VY Sbjct: 124 APVWFSGQENDHGPLLNTQLKPADDYRPTLKLVSLDIETSEHGELYCIGLEGCGQRQVYM 183 Query: 191 LGPPSGAVEA--VDFELQFCATRKELIDCLNAWMARHDPDAIIGWNLVQFDLNVLQKQAQ 248 LGPP+G +DF L++ A+R L++ LN W+A HDPDAIIGWNLVQFDL VLQK A Sbjct: 184 LGPPNGETTGTPLDFNLEYVASRPLLLEKLNQWLAVHDPDAIIGWNLVQFDLRVLQKHAD 243 Query: 249 KYQTTLRLGRAGRVLEWRQHGLRANHLLVSAPGRLVIDGIESLRSAFWNFPSFSLENVAQ 308 +YQ LR GR G +LEWR+HG + H SA GRL+IDGIE+L+SA WNFPSFSLE+V+Q Sbjct: 244 RYQIPLRFGRGGNLLEWREHGFKQGHFFASAAGRLIIDGIEALKSATWNFPSFSLESVSQ 303 Query: 309 SLLGEGKAIATPYQRMDEIDRMFAEDKAALATYNLKDCELVTRIFAKTEILSFLLERASV 368 +LLGEGKA +PYQRMDEI++ FA DK ALA YNLKDCELVTRIFAKTE+LSFLLER++V Sbjct: 304 TLLGEGKASDSPYQRMDEINQRFAHDKPALARYNLKDCELVTRIFAKTELLSFLLERSTV 363 Query: 369 TGLQADRSGGSVAAFTHLYLPHMHRKGYVAPNLGEAEALASPGGFVMDSRPGLYDSVIVL 428 TGL ADRSGGSVAAFTHLYLP MHR GYVAPNLGE SPGGFVMDS+PGLYDSV+VL Sbjct: 364 TGLAADRSGGSVAAFTHLYLPRMHRIGYVAPNLGELPEEHSPGGFVMDSQPGLYDSVLVL 423 Query: 429 DYKSLYPSIIRTFLIDPVGLVDGTLNEPEAQ-TVPGFNGARFSRRSHSLPAIIEQIWQGR 487 DYKSLYPSIIRTFLIDPVGLV G + +P+ Q +VPGF GA FSR H LPAI+ QIWQGR Sbjct: 424 DYKSLYPSIIRTFLIDPVGLVAG-MQQPDIQHSVPGFRGAWFSREKHCLPAIVNQIWQGR 482 Query: 488 EVAKAQGNKPLQQALKIIMNSFYGVLGSTACRFFDSRLASSITRRGHEIMHRTRELIEQQ 547 E AK Q NKPL QALKIIMN+FYGVLGS+ CRFFD RLASSIT RGHEIM +TRELIE Q Sbjct: 483 EAAKRQQNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRQTRELIEAQ 542 Query: 548 GVEVIYGDTDSTFVWLRKPHDDAQARQIGLQLTALINDWWRRHLSEQYGLESALELQFEV 607 G +VIYGDTDSTFVWL+ H+D QA +IG +L L+N WW+ H+ + + L ALEL+FE+ Sbjct: 543 GYQVIYGDTDSTFVWLKSAHNDEQATRIGNELVQLVNQWWQNHIQQNFNLPCALELEFEI 602 Query: 608 HYQRFLMPNIRGSDTGSKKRYAGYVRSADGQDKVTYKGLETVRTDWSPLAQRFQQALYLR 667 HY+RFLMP IRG++ GSKKRYAG + + G D++ YKGLETVRTDW+PLAQ+FQ+ LYLR Sbjct: 603 HYRRFLMPTIRGAEQGSKKRYAGLISTPTG-DQMVYKGLETVRTDWTPLAQQFQRELYLR 661 Query: 668 IFRGEPYRDFITGYVADLLAGRLDELLVYRKRLRRQLDHYEKNVPPHVRAARLADQVNEE 727 IF+ +PY+D++ YVA L G LDE LVYRKRLRR+LD Y++NVPPH RAARLAD+ N + Sbjct: 662 IFQQQPYQDYVRDYVARTLNGELDEQLVYRKRLRRRLDDYQRNVPPHARAARLADEFNRK 721 Query: 728 GGRPLQYQQGGWINYVMTTAGPEPLEKRRAAIDYAHYLERQLAPVADAILVFVGDSFAAV 787 GRPLQYQ GGWI+YVMTTAGPEPLE R++ IDY HYL RQL PVADAIL F D F + Sbjct: 722 LGRPLQYQNGGWISYVMTTAGPEPLETRQSPIDYDHYLTRQLQPVADAILPFTQDDFTTL 781 Query: 788 TSPQQELF 795 + Q LF Sbjct: 782 ITGQMGLF 789 >PA1886 Non COG Length = 787 Score = 1083 bits (2800), Expect = 0.0, Method: Compositional matrix adjust. Identities = 531/783 (67%), Positives = 630/783 (80%), Gaps = 1/783 (0%) Query: 13 GFIVSRHWRDTPAGVEIELWLATDEGPQCLRLPPQPAVAFVPQEQAERVQALIQGERGME 72 GF+++RHWRDTPAG E+ WLAT++GP+ +RLPPQP+VAFV EQ RV++L+ GE G E Sbjct: 6 GFVLTRHWRDTPAGTEVAFWLATEQGPRQVRLPPQPSVAFVLAEQRGRVESLLAGETGAE 65 Query: 73 LRPLDHLKDLSQRPVLGLYARQYRKLLKMEKTLLAAGIAVYEADIRPPERYLMERFINAP 132 LRPL L+D QRPVLGLY +Q+R+L+ +EK L AG+ V+EADIRPPERYLMERFI AP Sbjct: 66 LRPL-ALRDFQQRPVLGLYCQQHRQLMNLEKRLRQAGVEVFEADIRPPERYLMERFITAP 124 Query: 133 LAFQGVDDGHGALVEARIRPLPGYRPPLKLASLDIETSWQGELYSIAIEGCGQRSVYALG 192 ++ + + G+L+ R++P P YRP L+L SLDIET+ +G+LYSIA+EGC QR VY LG Sbjct: 125 VSLEASVEADGSLLARRLKPAPDYRPRLRLVSLDIETNARGDLYSIALEGCDQRQVYMLG 184 Query: 193 PPSGAVEAVDFELQFCATRKELIDCLNAWMARHDPDAIIGWNLVQFDLNVLQKQAQKYQT 252 P +G AVDF L +C +R L++ LN W+A HDPDAIIGWNLVQFDL VL + AQ+ + Sbjct: 185 PANGDAAAVDFRLDYCDSRAGLLERLNQWLAEHDPDAIIGWNLVQFDLRVLHEHAQRLKV 244 Query: 253 TLRLGRAGRVLEWRQHGLRANHLLVSAPGRLVIDGIESLRSAFWNFPSFSLENVAQSLLG 312 LRLGR G + WR+HG R NH +A GRL+IDGIE+LRSA W+FPSFSLENVA++LLG Sbjct: 245 PLRLGRGGDEMGWREHGSRNNHFFAAAAGRLIIDGIEALRSATWSFPSFSLENVARTLLG 304 Query: 313 EGKAIATPYQRMDEIDRMFAEDKAALATYNLKDCELVTRIFAKTEILSFLLERASVTGLQ 372 EGKAI PYQRMDEIDRMFAEDK ALA YNLKDCELVTRIFA+TE+L FLLERA+VTGL Sbjct: 305 EGKAIDNPYQRMDEIDRMFAEDKPALAHYNLKDCELVTRIFARTELLDFLLERATVTGLP 364 Query: 373 ADRSGGSVAAFTHLYLPHMHRKGYVAPNLGEAEALASPGGFVMDSRPGLYDSVIVLDYKS 432 ADRSGGSVAAFTHLY+P MHR G+VAPNLGE ASPGGFVMDSRPGLY+SV+VLDYKS Sbjct: 365 ADRSGGSVAAFTHLYMPLMHRAGFVAPNLGEKRPEASPGGFVMDSRPGLYESVLVLDYKS 424 Query: 433 LYPSIIRTFLIDPVGLVDGTLNEPEAQTVPGFNGARFSRRSHSLPAIIEQIWQGREVAKA 492 LYPSIIRTFLIDPVGLV+G + +V GF GARFSR H LPAI+ ++W+GRE AK Sbjct: 425 LYPSIIRTFLIDPVGLVEGLRQPDDEHSVEGFRGARFSRTRHCLPAIVARVWEGREAAKR 484 Query: 493 QGNKPLQQALKIIMNSFYGVLGSTACRFFDSRLASSITRRGHEIMHRTRELIEQQGVEVI 552 + N+PL QALKIIMN+FYGVLGS+ CRFFD RLASSIT RGH IM RTRELIE +G VI Sbjct: 485 ERNQPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHRIMRRTRELIEAEGYTVI 544 Query: 553 YGDTDSTFVWLRKPHDDAQARQIGLQLTALINDWWRRHLSEQYGLESALELQFEVHYQRF 612 YGDTDSTFVWL P + +A IG L A +NDWWR HL E++GL+SALELQFE HY+RF Sbjct: 545 YGDTDSTFVWLGSPRAEEEAAAIGRALVARVNDWWREHLKEEFGLDSALELQFETHYRRF 604 Query: 613 LMPNIRGSDTGSKKRYAGYVRSADGQDKVTYKGLETVRTDWSPLAQRFQQALYLRIFRGE 672 LMP +RG++ GSKKRYAG VR ADG +++ +KGLETVRTDWSPLAQRFQQ LYLRIF + Sbjct: 605 LMPTVRGAEEGSKKRYAGLVRRADGGEEMVFKGLETVRTDWSPLAQRFQQELYLRIFNRQ 664 Query: 673 PYRDFITGYVADLLAGRLDELLVYRKRLRRQLDHYEKNVPPHVRAARLADQVNEEGGRPL 732 PY+D++ YV LAG LD+LLVYRKRLRR+LD Y++NVPPHVRAAR+AD N E GRP Sbjct: 665 PYQDYVRDYVRRTLAGELDDLLVYRKRLRRRLDDYQRNVPPHVRAARIADDYNLERGRPR 724 Query: 733 QYQQGGWINYVMTTAGPEPLEKRRAAIDYAHYLERQLAPVADAILVFVGDSFAAVTSPQQ 792 QYQ GGWI+YV++ AGPEPLE RR+AIDY HY+ +QL PVADAIL FVGD FA + Q Sbjct: 725 QYQSGGWISYVISVAGPEPLEARRSAIDYEHYVGKQLQPVADAILPFVGDDFATLVDRQM 784 Query: 793 ELF 795 LF Sbjct: 785 ALF 787 >polB [L] COG0417 DNA polymerase elongation subunit (family B) Eco Escherichia coli K12 Length = 783 Score = 1016 bits (2626), Expect = 0.0, Method: Compositional matrix adjust. Identities = 494/785 (62%), Positives = 596/785 (75%), Gaps = 4/785 (0%) Query: 11 RAGFIVSRHWRDTPAGVEIELWLATDEGPQCLRLPPQPAVAFVPQEQAERVQALIQGERG 70 +AGFI++RHWRDTP G E+ WLATD GP + L PQ +VAF+P +Q R Q ++QGE+G Sbjct: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62 Query: 71 MELRPLDHLKDLSQRPVLGLYARQYRKLLKMEKTLLAAGIAVYEADIRPPERYLMERFIN 130 L PL LKD ++PV GLY R +R+L+ EK L G+ VYEAD+RPPERYLMERFI Sbjct: 63 FRLTPLA-LKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFIT 121 Query: 131 APLAFQGVDDGHGALVEARIRPLPGYRPPLKLASLDIETSWQGELYSIAIEGCGQRSVYA 190 +P+ +G D +G +V AR++P P YRPPLK S+DIET+ GELY I +EGCGQR VY Sbjct: 122 SPVWVEG-DMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180 Query: 191 LGPPSGAVEAVDFELQFCATRKELIDCLNAWMARHDPDAIIGWNLVQFDLNVLQKQAQKY 250 LGP +G ++DFEL++ A+R +L++ LNAW A +DPD IIGWN+VQFDL +LQK A++Y Sbjct: 181 LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240 Query: 251 QTTLRLGRAGRVLEWRQHGLRANHLLVSAPGRLVIDGIESLRSAFWNFPSFSLENVAQSL 310 + LRLGR LEWR+HG + A GRL+IDGIE+L+SAFWNF SFSLE VAQ L Sbjct: 241 RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300 Query: 311 LGEGKAIATPYQRMDEIDRMFAEDKAALATYNLKDCELVTRIFAKTEILSFLLERASVTG 370 LGEGK+I P+ RMDEIDR FAEDK ALATYNLKDCELVT+IF KTEI+ FLLERA+V G Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360 Query: 371 LQADRSGGSVAAFTHLYLPHMHRKGYVAPNLGEAEALASPGGFVMDSRPGLYDSVIVLDY 430 L DR GGSVAAF HLY P MHR GYVAPNLGE ASPGG+VMDSRPGLYDSV+VLDY Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420 Query: 431 KSLYPSIIRTFLIDPVGLVDGTLNEPEAQTVPGFNGARFSRRSHSLPAIIEQIWQGREVA 490 KSLYPSIIRTFLIDPVGLV+G + GF A FSR H LP I+ IW GR+ A Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480 Query: 491 KAQGNKPLQQALKIIMNSFYGVLGSTACRFFDSRLASSITRRGHEIMHRTRELIEQQGVE 550 K QGNKPL QALKIIMN+FYGVLG+TACRFFD RLASSIT RGH+IM +T+ LIE QG + Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD 540 Query: 551 VIYGDTDSTFVWLRKPHDDAQARQIGLQLTALINDWWRRHLSEQYGLESALELQFEVHYQ 610 VIYGDTDSTFVWL+ H + +A +IG L +N WW L +Q L SALEL++E H+ Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQR-LTSALELEYETHFC 599 Query: 611 RFLMPNIRGSDTGSKKRYAGYVRSADGQDKVTYKGLETVRTDWSPLAQRFQQALYLRIFR 670 RFLMP IRG+DTGSKKRYAG ++ D Q ++ +KGLETVRTDW+PLAQ+FQQ LYLRIFR Sbjct: 600 RFLMPTIRGADTGSKKRYAGLIQEGDKQ-RMVFKGLETVRTDWTPLAQQFQQELYLRIFR 658 Query: 671 GEPYRDFITGYVADLLAGRLDELLVYRKRLRRQLDHYEKNVPPHVRAARLADQVNEEGGR 730 EPY++++ + L+AG LD LVYRKRLRR L Y++NVPPHVRAARLAD+ N++ GR Sbjct: 659 NEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGR 718 Query: 731 PLQYQQGGWINYVMTTAGPEPLEKRRAAIDYAHYLERQLAPVADAILVFVGDSFAAVTSP 790 PLQYQ G I YV TT GPEPL+ +R+ +DY HYL RQL PVA+ IL F+ D+FA + + Sbjct: 719 PLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTG 778 Query: 791 QQELF 795 Q LF Sbjct: 779 QLGLF 783 >ZpolB [L] COG0417 DNA polymerase elongation subunit (family B) EcZ Escherichia coli O157:H7 EDL933 Length = 783 Score = 1014 bits (2621), Expect = 0.0, Method: Compositional matrix adjust. Identities = 494/785 (62%), Positives = 595/785 (75%), Gaps = 4/785 (0%) Query: 11 RAGFIVSRHWRDTPAGVEIELWLATDEGPQCLRLPPQPAVAFVPQEQAERVQALIQGERG 70 +AGFI++RHWRDTP G E+ WLATD GP + L PQ +VAF+P +Q R Q +++GE+G Sbjct: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILRGEQG 62 Query: 71 MELRPLDHLKDLSQRPVLGLYARQYRKLLKMEKTLLAAGIAVYEADIRPPERYLMERFIN 130 L PL LKD ++PV GLY R +R+L+ EK L G+ VYEAD+RPPERYLMERFI Sbjct: 63 FRLTPLA-LKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFIT 121 Query: 131 APLAFQGVDDGHGALVEARIRPLPGYRPPLKLASLDIETSWQGELYSIAIEGCGQRSVYA 190 +P+ +G D +GA+V AR++P P YRPPLK S+DIET+ GELY I +EGCGQR VY Sbjct: 122 SPVWVEG-DMHNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180 Query: 191 LGPPSGAVEAVDFELQFCATRKELIDCLNAWMARHDPDAIIGWNLVQFDLNVLQKQAQKY 250 LGP +G A+DFEL++ A+R +L++ LNAW A +DPD IIGWN+VQFDL +LQK A++Y Sbjct: 181 LGPENGDASALDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240 Query: 251 QTTLRLGRAGRVLEWRQHGLRANHLLVSAPGRLVIDGIESLRSAFWNFPSFSLENVAQSL 310 + LRLGR LEWR+HG + A GRL+IDGIE+L+SAFWNF SFSLE VAQ L Sbjct: 241 RIPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300 Query: 311 LGEGKAIATPYQRMDEIDRMFAEDKAALATYNLKDCELVTRIFAKTEILSFLLERASVTG 370 LGEGK+I P+ RMDEIDR FAEDK ALATYNLKDCELVT+IF KTEI+ FLLERA+V G Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360 Query: 371 LQADRSGGSVAAFTHLYLPHMHRKGYVAPNLGEAEALASPGGFVMDSRPGLYDSVIVLDY 430 L DR GGSVAAF HLY P MHR GYVAPNLGE ASPGG+VMDSRPGLYDSV+VLDY Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420 Query: 431 KSLYPSIIRTFLIDPVGLVDGTLNEPEAQTVPGFNGARFSRRSHSLPAIIEQIWQGREVA 490 KSLYPSIIRTFLIDPVGLV+G + GF A FSR H LP I+ IW GR+ A Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480 Query: 491 KAQGNKPLQQALKIIMNSFYGVLGSTACRFFDSRLASSITRRGHEIMHRTRELIEQQGVE 550 K QGNKPL QALKIIMN+FYGVLG+TACRFFD RL SSIT RGH+IM +T+ LIE QG + Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLVSSITMRGHQIMRQTKALIEAQGYD 540 Query: 551 VIYGDTDSTFVWLRKPHDDAQARQIGLQLTALINDWWRRHLSEQYGLESALELQFEVHYQ 610 VIYGDTDSTFVWL+ H + +A +IG L +N WW L +Q L SALEL++E H+ Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEATKIGRALVQHVNVWWAETLQKQ-QLTSALELEYETHFC 599 Query: 611 RFLMPNIRGSDTGSKKRYAGYVRSADGQDKVTYKGLETVRTDWSPLAQRFQQALYLRIFR 670 RFLMP IRG+DTGSKKRYAG ++ D Q ++ +KGLETVRTDW+PLAQ+FQQ LYLRIFR Sbjct: 600 RFLMPTIRGADTGSKKRYAGLIQEGDKQ-RMVFKGLETVRTDWTPLAQQFQQELYLRIFR 658 Query: 671 GEPYRDFITGYVADLLAGRLDELLVYRKRLRRQLDHYEKNVPPHVRAARLADQVNEEGGR 730 EPY+++ + L+AG LD LVYRKRLRR L Y++NVPPHVRAARLAD+ N++ GR Sbjct: 659 NEPYQEYFRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGR 718 Query: 731 PLQYQQGGWINYVMTTAGPEPLEKRRAAIDYAHYLERQLAPVADAILVFVGDSFAAVTSP 790 PLQYQ G I YV TT GPEPL+ +R+ +DY HYL RQL PVA+ IL F+ D+FA + + Sbjct: 719 PLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTG 778 Query: 791 QQELF 795 Q LF Sbjct: 779 QLGLF 783 >ECs0064 [L] COG0417 DNA polymerase elongation subunit (family B) Ecs Escherichia coli O157:H7 Length = 783 Score = 1014 bits (2621), Expect = 0.0, Method: Compositional matrix adjust. Identities = 494/785 (62%), Positives = 595/785 (75%), Gaps = 4/785 (0%) Query: 11 RAGFIVSRHWRDTPAGVEIELWLATDEGPQCLRLPPQPAVAFVPQEQAERVQALIQGERG 70 +AGFI++RHWRDTP G E+ WLATD GP + L PQ +VAF+P +Q R Q +++GE+G Sbjct: 3 QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILRGEQG 62 Query: 71 MELRPLDHLKDLSQRPVLGLYARQYRKLLKMEKTLLAAGIAVYEADIRPPERYLMERFIN 130 L PL LKD ++PV GLY R +R+L+ EK L G+ VYEAD+RPPERYLMERFI Sbjct: 63 FRLTPLA-LKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFIT 121 Query: 131 APLAFQGVDDGHGALVEARIRPLPGYRPPLKLASLDIETSWQGELYSIAIEGCGQRSVYA 190 +P+ +G D +GA+V AR++P P YRPPLK S+DIET+ GELY I +EGCGQR VY Sbjct: 122 SPVWVEG-DMHNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM 180 Query: 191 LGPPSGAVEAVDFELQFCATRKELIDCLNAWMARHDPDAIIGWNLVQFDLNVLQKQAQKY 250 LGP +G A+DFEL++ A+R +L++ LNAW A +DPD IIGWN+VQFDL +LQK A++Y Sbjct: 181 LGPENGDASALDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY 240 Query: 251 QTTLRLGRAGRVLEWRQHGLRANHLLVSAPGRLVIDGIESLRSAFWNFPSFSLENVAQSL 310 + LRLGR LEWR+HG + A GRL+IDGIE+L+SAFWNF SFSLE VAQ L Sbjct: 241 RIPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL 300 Query: 311 LGEGKAIATPYQRMDEIDRMFAEDKAALATYNLKDCELVTRIFAKTEILSFLLERASVTG 370 LGEGK+I P+ RMDEIDR FAEDK ALATYNLKDCELVT+IF KTEI+ FLLERA+V G Sbjct: 301 LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG 360 Query: 371 LQADRSGGSVAAFTHLYLPHMHRKGYVAPNLGEAEALASPGGFVMDSRPGLYDSVIVLDY 430 L DR GGSVAAF HLY P MHR GYVAPNLGE ASPGG+VMDSRPGLYDSV+VLDY Sbjct: 361 LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY 420 Query: 431 KSLYPSIIRTFLIDPVGLVDGTLNEPEAQTVPGFNGARFSRRSHSLPAIIEQIWQGREVA 490 KSLYPSIIRTFLIDPVGLV+G + GF A FSR H LP I+ IW GR+ A Sbjct: 421 KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA 480 Query: 491 KAQGNKPLQQALKIIMNSFYGVLGSTACRFFDSRLASSITRRGHEIMHRTRELIEQQGVE 550 K QGNKPL QALKIIMN+FYGVLG+TACRFFD RL SSIT RGH+IM +T+ LIE QG + Sbjct: 481 KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLVSSITMRGHQIMRQTKALIEAQGYD 540 Query: 551 VIYGDTDSTFVWLRKPHDDAQARQIGLQLTALINDWWRRHLSEQYGLESALELQFEVHYQ 610 VIYGDTDSTFVWL+ H + +A +IG L +N WW L +Q L SALEL++E H+ Sbjct: 541 VIYGDTDSTFVWLKGAHSEEEATKIGRALVQHVNVWWAETLQKQ-QLTSALELEYETHFC 599 Query: 611 RFLMPNIRGSDTGSKKRYAGYVRSADGQDKVTYKGLETVRTDWSPLAQRFQQALYLRIFR 670 RFLMP IRG+DTGSKKRYAG ++ D Q ++ +KGLETVRTDW+PLAQ+FQQ LYLRIFR Sbjct: 600 RFLMPTIRGADTGSKKRYAGLIQEGDKQ-RMVFKGLETVRTDWTPLAQQFQQELYLRIFR 658 Query: 671 GEPYRDFITGYVADLLAGRLDELLVYRKRLRRQLDHYEKNVPPHVRAARLADQVNEEGGR 730 EPY+++ + L+AG LD LVYRKRLRR L Y++NVPPHVRAARLAD+ N++ GR Sbjct: 659 NEPYQEYFRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGR 718 Query: 731 PLQYQQGGWINYVMTTAGPEPLEKRRAAIDYAHYLERQLAPVADAILVFVGDSFAAVTSP 790 PLQYQ G I YV TT GPEPL+ +R+ +DY HYL RQL PVA+ IL F+ D+FA + + Sbjct: 719 PLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTG 778 Query: 791 QQELF 795 Q LF Sbjct: 779 QLGLF 783