BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2119.p         (93 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA1508 [S] COG4104 Uncharacterized conserved protein Pae Pseudom...    78   6e-15
RSp0515 [S] COG4104 Uncharacterized conserved protein Rso Ralsto...    65   3e-11
RSp0204 [S] COG4104 Uncharacterized conserved protein Rso Ralsto...    61   6e-10
RSp0765 [S] COG4104 Uncharacterized conserved protein Rso Ralsto...    57   1e-08
RSc0961 [S] COG4104 Uncharacterized conserved protein Rso Ralsto...    57   1e-08

>PA1508 [S] COG4104 Uncharacterized conserved protein Pae Pseudomonas
          aeruginosa
          Length = 86

 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/79 (51%), Positives = 47/79 (59%)

Query: 5  IIRLDDPTSHGGVVQEGFANVKLYGKAMAGVGHRGYCPQCQCEFLILAGEETYEYLGRQV 64
          IIRL D TSHGG V E F    L GK MAGVGH+  CP C+  F I  G    +  G  V
Sbjct: 3  IIRLGDTTSHGGTVIEAFGQTDLNGKPMAGVGHQVVCPLCKGTFPITEGSALLDVNGVPV 62

Query: 65 AVEGMMTSCGAVLIATQYL 83
          A+ GM T+CGA LIA+  L
Sbjct: 63 ALHGMKTACGASLIASGPL 81


>RSp0515 [S] COG4104 Uncharacterized conserved protein Rso Ralstonia
          solanacearum
          Length = 88

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 2/78 (2%)

Query: 5  IIRLDDPTSHGG-VVQEGFANVKLYGKAMAGVGHRGYCP-QCQCEFLILAGEETYEYLGR 62
          IIRL DPT HGG VVQ    N K+ G A+A  G R  CP +   + +I+ G+E ++  G 
Sbjct: 4  IIRLGDPTDHGGAVVQTSAPNFKVNGIAVARKGDRCSCPREGHQDCVIIEGDEHFKVDGV 63

Query: 63 QVAVEGMMTSCGAVLIAT 80
           VA EG  TSCGAVLIAT
Sbjct: 64 PVAFEGHRTSCGAVLIAT 81


>RSp0204 [S] COG4104 Uncharacterized conserved protein Rso Ralstonia
          solanacearum
          Length = 88

 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 2/78 (2%)

Query: 5  IIRLDDPTSHGG-VVQEGFANVKLYGKAMAGVGHRGYCP-QCQCEFLILAGEETYEYLGR 62
          +IRL DPT HGG VVQ    N K+ G A+A  G R  CP +   + +I+ G+E ++  G 
Sbjct: 4  VIRLGDPTEHGGAVVQTSAPNFKVNGVAVARKGDRCSCPRKGHQDCVIIEGDEHFKVDGV 63

Query: 63 QVAVEGMMTSCGAVLIAT 80
           +A EG  TSCGA L AT
Sbjct: 64 PIAFEGHKTSCGATLTAT 81


>RSp0765 [S] COG4104 Uncharacterized conserved protein Rso Ralstonia
          solanacearum
          Length = 89

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 1  MSRAIIRLDDPTSHGGVVQEGFANVKLYGKAMAGVGHRGYCPQC--QCEFLILAGEETYE 58
          M+R  I L D T HGGVV     N    GK +A VG +  CPQ       +I+ G+    
Sbjct: 1  MTRPFILLGDKTDHGGVVITASGNTTTGGKGIACVGDKVTCPQSGHGGTTVIVTGDPNVV 60

Query: 59 YLGRQVAVEGMMTSCGAVLIATQ 81
            GRQ A  G  T+CGA L+A+Q
Sbjct: 61 IDGRQAARHGDKTACGATLLASQ 83


>RSc0961 [S] COG4104 Uncharacterized conserved protein Rso Ralstonia
          solanacearum
          Length = 88

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 2/80 (2%)

Query: 3  RAIIRLDDPTSHGG-VVQEGFANVKLYGKAMAGVGHRGYCP-QCQCEFLILAGEETYEYL 60
          R IIRL D T HGG V+Q      K+ G  +A  G R  CP +   + +I+ G+E ++  
Sbjct: 2  RQIIRLGDSTDHGGKVIQTAARQFKVDGVPVARKGDRCSCPREGHQDCVIIEGDEHFKVD 61

Query: 61 GRQVAVEGMMTSCGAVLIAT 80
          G  VA EG  TSCGA+LIAT
Sbjct: 62 GVPVAFEGHKTSCGAMLIAT 81