BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2103.p (263 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PAB0772 [M] COG0463 Glycosyltransferases involved in cell wall b... 85 2e-16 all1766 [M] COG0463 Glycosyltransferases involved in cell wall b... 84 3e-16 BH3713 [M] COG0463 Glycosyltransferases involved in cell wall bi... 82 1e-15 alr3063 [M] COG0463 Glycosyltransferases involved in cell wall b... 72 1e-12 alr3067 [M] COG0463 Glycosyltransferases involved in cell wall b... 71 2e-12 >PAB0772 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Pab Pyrococcus abyssi Length = 298 Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 6/196 (3%) Query: 7 PLFSIIVTTHRRPAILERALRSLLAQSFVDYEIVLVADEGSIPTKEVASRLLREKDVFLC 66 P+ S+I+ T+ R +L RA+ S+L Q F D+E+++V D + T EV + + ++ Sbjct: 4 PIVSVIIPTYNRANLLRRAIASVLNQKFKDFELIVVDDASTDNTPEVVESIEDGRIRYIR 63 Query: 67 LPGAKGPAESRNAGVQLARGRFILFLDDDDSYRPDFLQAIVQCNRFLSDAVNY-VSYTQL 125 L G +RN G++ A+GRFI LDDDD + P L+ VQ +F + + V Y Sbjct: 64 LKKNSGGPIARNIGIKKAKGRFIALLDDDDEWLPHRLE--VQVRKFENLGKEFGVVYGGF 121 Query: 126 KEVRTPEGTHVLSSTEVDTGATDIRTLLVSNFIPNNAIILSSSIAKR-HLVDATLQSHED 184 V + +L LL NFI + +++ K+ L D L S +D Sbjct: 122 YYV--SQDGRILGKRLPKHRGDIYSHLLKENFIGSPTLLIRRECFKKAGLFDPRLSSSQD 179 Query: 185 WDYLISLVLKYEFNFL 200 WD + + Y+F+++ Sbjct: 180 WDMWLRIARYYKFDYV 195 >all1766 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Nos Nostoc sp. PCC 7120 Length = 333 Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 103/205 (50%), Gaps = 10/205 (4%) Query: 7 PLFSIIVTTHRRPAILERALRSLLAQSFVDYEIVLVADEGSIPTKEVASRLLREKDVFLC 66 P+ S+I+ + +++ + S+L QSF D+E++++ D T ++ S++ + Sbjct: 9 PIISVIIPAYNCEKTIKKTIDSVLDQSFTDFELIVINDGSQDATLDIVSQIEDSRIKIFS 68 Query: 67 LPGAKGPAESRNAGVQLARGRFILFLDDDDSYRPDFLQAIVQCNRFLSDAVNYVSYTQLK 126 A G SRN G+ LA G+FI FLD DD + P+ L++ Q ++ +V+Y+ Sbjct: 69 FENAGGNV-SRNRGLNLAVGKFISFLDADDIWTPNKLES--QLEALHNNPGFHVAYSWTD 125 Query: 127 EVRTPEGTHVLSSTEVDTGATDIRTLLVSNFIPN--NAIILSSSIAKRHLVDATLQSHED 184 + +G ++S V + L ++NF+ N N +I ++ D +L++ +D Sbjct: 126 YI-DEDGNFLISGRRVTLNGDVYKKLFINNFLENGSNPLICKEALIALGGFDESLKAAQD 184 Query: 185 WDYLISLVLKYEFNFLGISGPVVHI 209 WD + L KY F ++ P V I Sbjct: 185 WDMWLRLANKYSF----VAVPYVQI 205 >BH3713 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Bha Bacillus halodurans Length = 303 Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 99/188 (52%), Gaps = 5/188 (2%) Query: 10 SIIVTTHRRPAILERALRSLLAQSFVDYEIVLVADEGSIPTKEVASRLLREKDV-FLCLP 68 SII+ TH R +L+RAL S L Q++ + E+++V+D + T V R+ V F+ Sbjct: 4 SIIIPTHNRAKLLKRALESTLNQTYKNIEVIVVSDGSTDNTDIVMDEYKRDSRVNFISYH 63 Query: 69 GAKGPAESRNAGVQLARGRFILFLDDDDSYRPDFLQAIVQCNRFLSDAVNYVSYTQLKEV 128 AKG +RN G++ A+G FI FLDDDD + PD L+ +Q F +A + YT ++ + Sbjct: 64 PAKGGNYARNTGIKNAKGEFIAFLDDDDEWMPDKLE--LQIKEFNQNANVGLVYTGVEII 121 Query: 129 RTPEGTHVLSSTEVDTGATDIRTLLVSNFI--PNNAIILSSSIAKRHLVDATLQSHEDWD 186 ++ + + +LV+N I ++ ++ + I + + D L++ +D+D Sbjct: 122 YNFNKRNIKYYSLPKKTGNLSKEILVANCIGTTSSVMVRKNLITECGMFDEKLKARQDYD 181 Query: 187 YLISLVLK 194 I + K Sbjct: 182 LWIRVCQK 189 >alr3063 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Nos Nostoc sp. PCC 7120 Length = 330 Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 4/193 (2%) Query: 8 LFSIIVTTHRRPAILERALRSLLAQSFVDYEIVLVADEGSIPTKEVASRLLREKDVFLCL 67 L S+I+ + ++ + S+ Q+F D+EI+++ D + T E+ + E+ Sbjct: 6 LISVIIPAYNAVLTIKETIESVQKQTFTDWEIIVINDGSTDGTPEIIQSIKDERLKIFNY 65 Query: 68 PGAKGPAESRNAGVQLARGRFILFLDDDDSYRPDFLQAIVQCNRFLSDAVNYVSYTQLKE 127 P +RN G+ A G FI FLD DD + D L+ ++ + +A S+T + Sbjct: 66 KNGGLPV-ARNRGILHASGEFIAFLDADDLWAVDKLEMQLKALQQHPEAGVAYSWTCFMD 124 Query: 128 VRTP-EGTHVLSSTEVDTGATDIRTLLVSNFI--PNNAIILSSSIAKRHLVDATLQSHED 184 V E L S++ + LLVS+FI +N +I +I D L+S ED Sbjct: 125 VNEQGEPVAYLPSSQYSFTGNVYQNLLVSDFIHSGSNTLIRKEAINSVGEFDPMLKSCED 184 Query: 185 WDYLISLVLKYEF 197 WDY + L ++F Sbjct: 185 WDYWLRLATHWDF 197 >alr3067 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Nos Nostoc sp. PCC 7120 Length = 323 Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 8/198 (4%) Query: 3 MTIAPLFSIIVTTHRRPAILERALRSLLAQSFVDYEIVLVADEGSIPTKEVASRLLREKD 62 + P+ S+I+ + + + S+ Q+F+D EI+++ D + T E+ + + Sbjct: 7 LNFVPIISVIIPVYNGEKTIIETIASVQHQTFLDIEIIVINDGSTDNTFELVRNIQDNRL 66 Query: 63 VFLCLPGAKGPAESRNAGVQLARGRFILFLDDDDSYRPDFLQAIVQCNRFLSDAVNYVSY 122 P +RN G+ A G+FI F+D DD + D L+ + +A S+ Sbjct: 67 KIFSYENGGLPV-ARNRGITHAVGQFIAFIDADDLWTTDKLELQFAALQEYPEAGLAYSW 125 Query: 123 TQLKEVRTPEGTHVLSSTEVDTGATDIRT-LLVSNFIPN--NAIILSSSIAKRHLVDATL 179 T K + + E ++ A D+ LL+ NF+ N N +I ++I L D TL Sbjct: 126 TYYKFANEADSY----ADESNSFAGDVYAELLIKNFLQNGSNPLIRRAAIDSVGLFDPTL 181 Query: 180 QSHEDWDYLISLVLKYEF 197 +S EDWD+ + L K++F Sbjct: 182 KSCEDWDFYLRLAAKWQF 199