BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2099.p (252 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1753 [E] COG0411 ABC-type branched-chain amino acid transport... 296 2e-80 BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transpo... 242 6e-64 RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport... 203 3e-52 AGl1459 [E] COG0411 ABC-type branched-chain amino acid transport... 182 5e-46 BMEII0343 [E] COG0411 ABC-type branched-chain amino acid transpo... 179 7e-45 >RSc1753 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 266 Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 147/241 (60%), Positives = 187/241 (77%) Query: 6 ALELHGLHKAFERSQILCGVDLQLQAGERCALIGPNGAGKSSLFNLVSGRYRADAGRVLL 65 ALEL + K F ++I+ GV+L + GER ALIGPNGAGKS+ FNL+SGR+ AG V L Sbjct: 7 ALELRDVRKRFGATEIIRGVNLTIGRGERHALIGPNGAGKSTTFNLISGRFAPSAGSVRL 66 Query: 66 HGRDITRDSPQQINRLGLARSFQITSLFPRLSAFENVRCALLWTLGYRYAFWRRISQLRD 125 +G +I +P +INR GL+RSFQIT++F RLS FEN+RCA+LW+LGY+Y+FW R+++LRD Sbjct: 67 NGEEIAGLAPYEINRRGLSRSFQITNIFHRLSVFENLRCAVLWSLGYQYSFWHRLAELRD 126 Query: 126 ANARAHAVLDKVGLAARAEVAAGELSYAEQRALELAVTIAADASVILLDEPTAGMSRAES 185 A RA AVL+++GL R + AAG L+YAEQRALE+ +TIA A VILLDEPTAGMSR+ES Sbjct: 127 ARERAEAVLEQIGLTHRHDAAAGTLTYAEQRALEIGITIAGGADVILLDEPTAGMSRSES 186 Query: 186 AAMVALIREVTVGKTLLMVEHDMQVVFDLADRIAVMDNGRVIACDSAQRIRANPQVQALY 245 V LIR+VTVGKTL+MVEHDM VVF LADRI+V+ G VIA D+ + IR N +V+ Y Sbjct: 187 DHAVDLIRKVTVGKTLVMVEHDMSVVFGLADRISVLVYGEVIATDTPEAIRNNRRVKEAY 246 Query: 246 L 246 L Sbjct: 247 L 247 >BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 251 Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 118/251 (47%), Positives = 171/251 (68%) Query: 1 MSTAYALELHGLHKAFERSQILCGVDLQLQAGERCALIGPNGAGKSSLFNLVSGRYRADA 60 M T L L L+K+F + I+ GV+L ++ GER A+IGPNGAGKS+LF+L+SG + + Sbjct: 1 MMTKDILVLDQLNKSFGPAHIIRGVNLAVRDGERHAVIGPNGAGKSTLFHLISGNFTPSS 60 Query: 61 GRVLLHGRDITRDSPQQINRLGLARSFQITSLFPRLSAFENVRCALLWTLGYRYAFWRRI 120 G + G +I +P +NR GLARSFQIT++FP L+ FEN+R A++ ++ FWR + Sbjct: 61 GSIRFQGEEIGGLTPAAVNRKGLARSFQITNIFPGLTVFENIRLAVMRRYKVQFTFWRPV 120 Query: 121 SQLRDANARAHAVLDKVGLAARAEVAAGELSYAEQRALELAVTIAADASVILLDEPTAGM 180 S +R A ++L++V L ARA A +LSY+EQR+LE+ +T+A+D +I+LDEP AGM Sbjct: 121 SSMRKVTAEVESLLEQVRLTARAYTLASQLSYSEQRSLEIGMTLASDPRLIILDEPMAGM 180 Query: 181 SRAESAAMVALIREVTVGKTLLMVEHDMQVVFDLADRIAVMDNGRVIACDSAQRIRANPQ 240 S+ E+ V LIRE+T +TL++VEHDM VVF LADRI+V+ G +IA + + IR N + Sbjct: 181 SQEETDYTVGLIREITQNRTLMIVEHDMYVVFTLADRISVLVYGEIIATGTPKEIRENAR 240 Query: 241 VQALYLDRRRH 251 V+ YL H Sbjct: 241 VREAYLGEEAH 251 >RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 256 Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 108/246 (43%), Positives = 149/246 (60%) Query: 1 MSTAYALELHGLHKAFERSQILCGVDLQLQAGERCALIGPNGAGKSSLFNLVSGRYRADA 60 M+ LE GL KAF+ + V+L+++ G ALIGPNGAGK++ FNL++ Sbjct: 1 MAQDIILETRGLTKAFKGFTAVSDVNLRVRRGSIHALIGPNGAGKTTCFNLLTKFLVPTR 60 Query: 61 GRVLLHGRDITRDSPQQINRLGLARSFQITSLFPRLSAFENVRCALLWTLGYRYAFWRRI 120 G +L +G DIT + P QI R G+ RSFQI+++FP LS ENVR L LG YAFWR Sbjct: 61 GTILFNGVDITPERPAQIARRGVIRSFQISAVFPHLSVLENVRIGLQRQLGTAYAFWRSE 120 Query: 121 SQLRDANARAHAVLDKVGLAARAEVAAGELSYAEQRALELAVTIAADASVILLDEPTAGM 180 L N RA +LD+VGL A EL Y +RALE+A T+A + ++LLDEPT GM Sbjct: 121 KTLAVLNDRAMQLLDQVGLTPFAGTVTVELPYGRKRALEIATTLAMEPELMLLDEPTQGM 180 Query: 181 SRAESAAMVALIREVTVGKTLLMVEHDMQVVFDLADRIAVMDNGRVIACDSAQRIRANPQ 240 + + LI+ V G+T+LMVEH+M VV +AD+I V+ G+++A + + NPQ Sbjct: 181 GHEDVDRVTELIQRVAEGRTILMVEHNMNVVSSIADKITVLQRGQILAEGPYEDVSKNPQ 240 Query: 241 VQALYL 246 V Y+ Sbjct: 241 VMEAYM 246 >AGl1459 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 268 Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 138/240 (57%) Query: 7 LELHGLHKAFERSQILCGVDLQLQAGERCALIGPNGAGKSSLFNLVSGRYRADAGRVLLH 66 L GL K F + VDL + ALIGPNGAGK+++FNL++ + G + Sbjct: 24 LSARGLTKTFGAFAAVKNVDLDVHHARVHALIGPNGAGKTTVFNLLTKFLQPTGGAITFM 83 Query: 67 GRDITRDSPQQINRLGLARSFQITSLFPRLSAFENVRCALLWTLGYRYAFWRRISQLRDA 126 G DIT+ P ++ RLGL RSFQI+++FP L+ ENVR AL FW +S L Sbjct: 84 GTDITKTPPDKVARLGLVRSFQISAVFPHLTVLENVRVALQRPNSLATQFWLPLSSLDRL 143 Query: 127 NARAHAVLDKVGLAARAEVAAGELSYAEQRALELAVTIAADASVILLDEPTAGMSRAESA 186 NARA ++ VGL A +LSY +R LE+A T+A D V+LLDEP AGM + + Sbjct: 144 NARAEELISMVGLTREKNALAADLSYGRKRVLEIATTLALDPKVLLLDEPMAGMGGEDVS 203 Query: 187 AMVALIREVTVGKTLLMVEHDMQVVFDLADRIAVMDNGRVIACDSAQRIRANPQVQALYL 246 + LIREV + +LMVEH+++VV D+ + V+ G ++A + A+P+V+ Y+ Sbjct: 204 HVAELIREVAKTRAVLMVEHNLKVVADICHHVTVLQRGEILAEGDYAAVSADPRVRTAYM 263 >BMEII0343 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 272 Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 95/245 (38%), Positives = 145/245 (59%) Query: 2 STAYALELHGLHKAFERSQILCGVDLQLQAGERCALIGPNGAGKSSLFNLVSGRYRADAG 61 ++ L GL K+F + VDL ++ ALIGPNGAGK+++FNL++ + +G Sbjct: 23 ASGIVLSARGLGKSFGGFHAVKNVDLDVEHARVHALIGPNGAGKTTVFNLLTKFLQPTSG 82 Query: 62 RVLLHGRDITRDSPQQINRLGLARSFQITSLFPRLSAFENVRCALLWTLGYRYAFWRRIS 121 + L G IT+ P ++ R GL RSFQI++ FP L+ ENV+ AL G FWR +S Sbjct: 83 EITLLGETITKTDPARVARKGLVRSFQISATFPHLTVLENVKVALQRPNGLATQFWRSLS 142 Query: 122 QLRDANARAHAVLDKVGLAARAEVAAGELSYAEQRALELAVTIAADASVILLDEPTAGMS 181 L +A+A +L++VGLA A +LSY +RALE+A T+A D V+LLDEP AGM Sbjct: 143 ALDWLDAQAVELLERVGLADARHALAADLSYGRKRALEIATTLALDPKVLLLDEPLAGMG 202 Query: 182 RAESAAMVALIREVTVGKTLLMVEHDMQVVFDLADRIAVMDNGRVIACDSAQRIRANPQV 241 + + ALI +V + +LMVEH+++VV D+A + V+ G ++A + + +V Sbjct: 203 HEDVHTIAALITDVAKDRAVLMVEHNLKVVADIAHHVTVLQRGEILASGDYATVSKDERV 262 Query: 242 QALYL 246 + Y+ Sbjct: 263 RTAYM 267