BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2061.p (304 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2157 [S] COG1801 Uncharacterized conserved protein Pae Pseudom... 348 7e-96 SMc01236 [S] COG1801 Uncharacterized conserved protein Sme Sinor... 201 2e-51 mlr0752 [S] COG1801 Uncharacterized conserved protein Mlo Mesorh... 199 5e-51 AGc2792 [S] COG1801 Uncharacterized conserved protein Atu Agroba... 194 3e-49 CC3109 Non COG 179 6e-45 >PA2157 [S] COG1801 Uncharacterized conserved protein Pae Pseudomonas aeruginosa Length = 312 Score = 348 bits (894), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 168/288 (58%), Positives = 213/288 (73%) Query: 2 GKIWIGISGWRYAPWRGSFYPKGLRQDDELHYASRVLPSIELNGSFYALQRPESYQRWYQ 61 ++ IGISGWRYAPWRG FYP+GLRQ DEL +ASR + SIE+NG+FYALQ PE ++ W + Sbjct: 5 ARLRIGISGWRYAPWRGDFYPEGLRQKDELRFASRAVNSIEINGTFYALQTPERFRGWAE 64 Query: 62 QTPPGFLFSHKGHRFITHTRSLQDVDGALANVFASGVFNLKEKLGPFLWQFPPSFRYEPE 121 TP F+FS K R+ITH R L+++D LAN FASG L+++LGPFLWQFPPS R++ E Sbjct: 65 DTPEDFVFSVKAPRYITHVRRLREIDEPLANFFASGPLALRQRLGPFLWQFPPSMRFDRE 124 Query: 122 LLEHFLSLLPHDTHAAQTLAQGHEPRMQGRVALEIDKKRKLRHAMEIRHESFVDESFIKL 181 L FL+ LP D AAQ LA+ R+ L+ D ++LRHA+EIRHESFVD +FI+L Sbjct: 125 LFADFLARLPRDGAAAQKLARHSAARLHREGYLDGDPAQRLRHAVEIRHESFVDPTFIEL 184 Query: 182 LRKYQVALVIADAPKKWPYQEDITADFMYLRLHGDKRLYQSGYSDEAIDAWAERIRAWAG 241 LR+Y+VALV+AD KWP D+ ADF+YLRLHGDK LY+SGYS+ A+ W RIRAWAG Sbjct: 185 LREYRVALVVADTAGKWPLLGDVCADFLYLRLHGDKELYRSGYSEAALGQWQARIRAWAG 244 Query: 242 GGQPQEGPRISAAGPRQRASRDIYCYFDNDMKVKAPFDARRLIARLGL 289 GGQ + R S P + +RD+YCYFDND+KV+AP+DARRL+ L L Sbjct: 245 GGQADDLRRASQDAPAKATARDLYCYFDNDVKVRAPYDARRLLQLLEL 292 >SMc01236 [S] COG1801 Uncharacterized conserved protein Sme Sinorhizobium meliloti Length = 267 Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 100/287 (34%), Positives = 159/287 (55%), Gaps = 24/287 (8%) Query: 2 GKIWIGISGWRYAPWRGSFYPKGLRQDDELHYASRVLPSIELNGSFYALQRPESYQRWYQ 61 G+I +GI GW + PW G+FYP L + +L +A + L +IE+NG++Y+ Q+P ++ +W Sbjct: 5 GQIRVGIGGWNFEPWEGTFYPDDLPKKRQLEFAGKELRTIEVNGTYYSSQKPATFAKWAA 64 Query: 62 QTPPGFLFSHKGHRFITHTRSLQDVDGALANVFASGVFNLKEKLGPFLWQFPPSFRYEPE 121 + P GF+FS K RF+T+ R L + ++ G+ L ++LGP LWQF P+ +++ E Sbjct: 65 EVPDGFIFSLKASRFVTNRRVLSEAGESMERFLTQGLTELGDRLGPILWQFAPTKKFDAE 124 Query: 122 LLEHFLSLLPHDTHAAQTLAQGHEPRMQGRVALEIDKKRKLRHAMEIRHESFVDESFIKL 181 E FL LLP KLRH +E+R+ SF F+KL Sbjct: 125 DFEGFLKLLPEKQDGL-----------------------KLRHVVEVRNPSFQVPDFVKL 161 Query: 182 LRKYQVALVIADAPKKWPYQEDITADFMYLRLHGDKRLYQSGYSDEAIDAWAERIRAWAG 241 + KY+VA+V+A+ +P D+T DF+Y RL ++ Y + +D WAER++ +A Sbjct: 162 IEKYKVAVVLAEH-ADYPMIADVTGDFVYARLQKGSDEVKTCYPPKDLDRWAERLKTFAA 220 Query: 242 GGQPQEGPRISAAGPRQRASRDIYCYFDNDMKVKAPFDARRLIARLG 288 GG+P + + + + A RD++ +F KV AP AR L R+G Sbjct: 221 GGEPDDLEKAAPERQPETAPRDVFAFFITSGKVNAPNGARELQKRVG 267 >mlr0752 [S] COG1801 Uncharacterized conserved protein Mlo Mesorhizobium loti Length = 268 Score = 199 bits (507), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 109/287 (37%), Positives = 157/287 (54%), Gaps = 24/287 (8%) Query: 2 GKIWIGISGWRYAPWRGSFYPKGLRQDDELHYASRVLPSIELNGSFYALQRPESYQRWYQ 61 G I G+ GW + PW SFYP L + +L YASR +PSIE+NG++Y+ + ++ +W Sbjct: 5 GTIRSGMGGWTFEPWDTSFYPDKLSKAKQLQYASRQVPSIEVNGTYYSSFKEPTFVKWAS 64 Query: 62 QTPPGFLFSHKGHRFITHTRSLQDVDGALANVFASGVFNLKEKLGPFLWQFPPSFRYEPE 121 + P GF++S KG+RF+T+ R L + ++ SGV L +KLGP LWQF P+ +++P+ Sbjct: 65 EAPDGFVYSLKGNRFVTNRRVLGEAGESMMRFLGSGVAALGDKLGPILWQFAPTKKFDPD 124 Query: 122 LLEHFLSLLPHDTHAAQTLAQGHEPRMQGRVALEIDKKRKLRHAMEIRHESFVDESFIKL 181 E FL LLP Q VA LRHA+E+R++SF F L Sbjct: 125 DFEAFLKLLPEK---------------QDGVA--------LRHALEVRNDSFFVPEFAAL 161 Query: 182 LRKYQVALVIADAPKKWPYQEDITADFMYLRLHGDKRLYQSGYSDEAIDAWAERIRAWAG 241 RKY+ A+V AD K+P D+T DF+Y RL Y+ + +D WA R + WA Sbjct: 162 ARKYKAAIVYADH-AKYPDIADVTGDFVYARLQTGSDDNPDCYTPKGLDEWAARAKIWAE 220 Query: 242 GGQPQEGPRISAAGPRQRASRDIYCYFDNDMKVKAPFDARRLIARLG 288 G QP + R A RD++ YF + KV+APF A L+ R+ Sbjct: 221 GKQPADLRRADPATDAPVQPRDVFVYFITEGKVRAPFGAMALMKRIA 267 >AGc2792 [S] COG1801 Uncharacterized conserved protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 271 Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 97/282 (34%), Positives = 152/282 (53%), Gaps = 24/282 (8%) Query: 2 GKIWIGISGWRYAPWRGSFYPKGLRQDDELHYASRVLPSIELNGSFYALQRPESYQRWYQ 61 G I GI GW + PW G+FYP+ L + +L +ASR L +IE+NG++Y+ Q+PE++ +W Sbjct: 10 GTIRTGIGGWTFEPWEGTFYPEKLTKKRQLEHASRQLTAIEVNGTYYSSQKPETFAKWAS 69 Query: 62 QTPPGFLFSHKGHRFITHTRSLQDVDGALANVFASGVFNLKEKLGPFLWQFPPSFRYEPE 121 + P F+FS K RF+T+ R L + ++ G+ L LGP LWQF P+ +++ + Sbjct: 70 EVPDDFIFSLKASRFVTNRRVLAEAGESMTKFLTQGLTELGSHLGPILWQFAPTKKFDAD 129 Query: 122 LLEHFLSLLPHDTHAAQTLAQGHEPRMQGRVALEIDKKRKLRHAMEIRHESFVDESFIKL 181 FL+LLP E LRH +E+R+E+F FI L Sbjct: 130 DFGAFLALLP-----------------------EKQDGISLRHVVEVRNETFQVPEFIDL 166 Query: 182 LRKYQVALVIADAPKKWPYQEDITADFMYLRLHGDKRLYQSGYSDEAIDAWAERIRAWAG 241 + KY+VA+V AD +P D+TADF+Y RL + ++ Y I WA+R++ +A Sbjct: 167 IAKYKVAVVCADH-HDYPMLPDVTADFVYCRLQKGEDDIKTCYPQTGISDWAKRLKTYAA 225 Query: 242 GGQPQEGPRISAAGPRQRASRDIYCYFDNDMKVKAPFDARRL 283 GG P + P + ++ RD++ +F K+ AP A+ L Sbjct: 226 GGVPDDLPLTAPGRKVEKTQRDVFAFFITGGKINAPVGAQEL 267 >CC3109 Non COG Length = 275 Score = 179 bits (455), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 144/290 (49%), Gaps = 44/290 (15%) Query: 1 MGKIWIGISGWRYAPWRGSFYPKGLRQDDELHYASRVLPSIELNGSFYALQRPESYQRWY 60 MGKI GI GW + PWRG+FYP L+Q DEL YA+ L SIE+NG++Y+ +P S+ +W Sbjct: 27 MGKIRTGIGGWTFEPWRGTFYPDDLKQKDELKYAASKLTSIEINGTYYSTFKPNSWMKWR 86 Query: 61 QQTPPGFLFSHKGHRFITHTRSLQDVDGALANVFASGVFNLKEKLGPFLWQFPPSFRYEP 120 +TP F+FS K RF T+ R L + + +L + G+ L KLGP WQF + +++P Sbjct: 87 DETPDDFVFSVKASRFCTNRRVLSENNDSLEKFLSQGLEELGPKLGPINWQFMATKKFDP 146 Query: 121 ELLEHFLSLLPHDTHAAQTLAQGHEPRMQGRVALEIDKKRKLRHAMEIRHESFVDESFIK 180 E FL LLP + K +LRHAME+R +F + F Sbjct: 147 ADFEGFLKLLPSE-----------------------QKGVRLRHAMEVRSPTFACQQFYD 183 Query: 181 LLRKYQVALVIA--DAPKKWPYQEDITADFMYLRLHGDKRLYQSGYSDEAIDAWAERIRA 238 L +Y VA+V A D +WP + TADF Y RL + +G + E +D + Sbjct: 184 LCAQYGVAIVYAVDDEAPEWPRIDQPTADFTYARLMCSREDEPTGMTSEELDGVVAQTHK 243 Query: 239 WAGGGQPQEGPRISAAGPRQRASRDIYCYFDNDMKVKAPFDARRLIARLG 288 WA G D++ YF KV+ P A LI +LG Sbjct: 244 WAERG-------------------DVFAYFIAGAKVRNPAAAMALIGKLG 274