BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2042.p (262 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value NMA0090 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglu... 331 9e-91 NMB0178 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglu... 329 3e-90 RSc1416 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglu... 305 9e-83 lpxA [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucos... 293 2e-79 STM0228 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglu... 292 6e-79 >NMA0090 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase NmA Neisseria meningitidis Z2491 Length = 258 Score = 331 bits (849), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 157/262 (59%), Positives = 194/262 (74%), Gaps = 4/262 (1%) Query: 1 MSKIHPSAVIAPGAQIDDSVEIGAYAVIGPDVRIGAGTRIGPHVVIEGHTRIGRDNEIFQ 60 M+ IHP+AVI P A++D SV++GAY VIGP+V+IGA T IGPH VI GHT IG +N IFQ Sbjct: 1 MTLIHPTAVIDPKAELDSSVKVGAYTVIGPNVQIGANTEIGPHAVINGHTSIGENNRIFQ 60 Query: 61 FASIGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLA 120 FAS+G PQDKKY EPT + IG+ NTIREF TFN GTV G TRIG+DNWIMAY HLA Sbjct: 61 FASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGIGETRIGDDNWIMAYCHLA 120 Query: 121 HDCQLGSHIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPF 180 HDC +G+H I ANNA+LAGHV +GD+V LGG+T V QFC IG +AMTAF A V +DVPP+ Sbjct: 121 HDCVVGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCRIGDYAMTAFAAGVHKDVPPY 180 Query: 181 VTAAGNRAVPSGINSEGLRRRGFSSEQIMEIKRAYKVIYRAGLPLEEAKQQLAEMEAKSA 240 A+G RA P+G+NSEG+RR GF++EQI +K YK +Y G+P EEAK + + A Sbjct: 181 FMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTLYHRGIPFEEAKADI----LRRA 236 Query: 241 HSAEHIRLLREFIEASARGIIR 262 + + + R+F SARGIIR Sbjct: 237 ETQAELAVFRDFFAQSARGIIR 258 >NMB0178 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase Nme Neisseria meningitidis MC58 Length = 258 Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 156/262 (59%), Positives = 193/262 (73%), Gaps = 4/262 (1%) Query: 1 MSKIHPSAVIAPGAQIDDSVEIGAYAVIGPDVRIGAGTRIGPHVVIEGHTRIGRDNEIFQ 60 M+ IHP+AVI P A++D V++GAY VIGP+V+IGA T IGPH VI GHT IG +N IFQ Sbjct: 1 MTLIHPTAVIDPKAELDSGVKVGAYTVIGPNVQIGANTEIGPHAVINGHTSIGENNRIFQ 60 Query: 61 FASIGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLA 120 FAS+G PQDKKY EPT + IG+ NTIREF TFN GTV G TRIG+DNWIMAY HLA Sbjct: 61 FASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGIGETRIGDDNWIMAYCHLA 120 Query: 121 HDCQLGSHIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPF 180 HDC +G+H I ANNA+LAGHV +GD+V LGG+T V QFC IG +AMTAF A V +DVPP+ Sbjct: 121 HDCVIGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCRIGDYAMTAFAAGVHKDVPPY 180 Query: 181 VTAAGNRAVPSGINSEGLRRRGFSSEQIMEIKRAYKVIYRAGLPLEEAKQQLAEMEAKSA 240 A+G RA P+G+NSEG+RR GF++EQI +K YK +Y G+P EEAK + + A Sbjct: 181 FMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTLYHRGIPFEEAKADI----LRRA 236 Query: 241 HSAEHIRLLREFIEASARGIIR 262 + + + R+F SARGIIR Sbjct: 237 ETQAELAVFRDFFAQSARGIIR 258 >RSc1416 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase Rso Ralstonia solanacearum Length = 271 Score = 305 bits (780), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 146/268 (54%), Positives = 197/268 (73%), Gaps = 6/268 (2%) Query: 1 MSKIHPSAVIAPGAQIDDSVEIGAYAVIGPDVRIGAGTRIGPHVVIEGHTRIGRDNEIFQ 60 + KIHP+AVI P A++ VE+GA+ VIGP+VRI +GTRIG H V+EG+T +GRDN+I Sbjct: 4 VQKIHPTAVIDPQAELAPDVEVGAFTVIGPNVRIDSGTRIGHHTVVEGYTTLGRDNQIGH 63 Query: 61 FASIGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLA 120 FAS+G PQD KY EPT + +GDRNTIREF T + GT QD G T IG+DNWIMAYVH+A Sbjct: 64 FASVGGRPQDMKYRDEPTRLIVGDRNTIREFTTIHTGTAQDVGITSIGDDNWIMAYVHIA 123 Query: 121 HDCQLGSHIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPF 180 HDC++G+H + ++NA +AGHV +GD LGG + VHQF IGAHAM +A+ QDVPPF Sbjct: 124 HDCRIGNHTVFSSNAQIAGHVEVGDWAILGGMSGVHQFVRIGAHAMLGGASALVQDVPPF 183 Query: 181 VTAA----GNRAVPSGINSEGLRRRGFSSEQIMEIKRAYKVIYRAGLPLEEAKQQLAEME 236 V AA GN+A P G+N GL+RRGFS+EQI +++AYK++Y++ L ++A+ ++A Sbjct: 184 VIAASDKGGNKAAPHGVNVVGLQRRGFSAEQIAGLRQAYKLLYKSDLSFDQAQAEIAAQV 243 Query: 237 AKS--AHSAEHIRLLREFIEASARGIIR 262 A++ A S E +R +FI A+ RGI+R Sbjct: 244 AQTEDAPSREALRTFADFIAATKRGIVR 271 >lpxA [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase Eco Escherichia coli K12 Length = 262 Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 141/259 (54%), Positives = 181/259 (69%), Gaps = 4/259 (1%) Query: 4 IHPSAVIAPGAQIDDSVEIGAYAVIGPDVRIGAGTRIGPHVVIEGHTRIGRDNEIFQFAS 63 +HP+A++ GA I + IG + ++GP V IG GT + HVV+ GHT+IGRDNEI+QFAS Sbjct: 8 VHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFAS 67 Query: 64 IGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLAHDC 123 IG QD KYAGEPT +EIGDRN IRE VT +RGTVQ G T++G+DN +M H+AHDC Sbjct: 68 IGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDC 127 Query: 124 QLGSHIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPFVTA 183 +G+ ILANNATLAGHV + D +GG T VHQFC IGAH M + V+QDVPP+V A Sbjct: 128 TVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIA 187 Query: 184 AGNRAVPSGINSEGLRRRGFSSEQIMEIKRAYKVIYRAGLPLEEAKQQLAEMEAKSAHSA 243 GN A P G+N EGL+RRGFS E I I+ AYK+IYR+G L+E K ++AE+ A + Sbjct: 188 QGNHATPFGVNIEGLKRRGFSREAITAIRNAYKLIYRSGKTLDEVKPEIAEL----AETY 243 Query: 244 EHIRLLREFIEASARGIIR 262 ++ +F S RG+IR Sbjct: 244 PEVKAFTDFFARSTRGLIR 262 >STM0228 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase Sty Salmonella typhimurium LT2 Length = 262 Score = 292 bits (747), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 142/259 (54%), Positives = 181/259 (69%), Gaps = 4/259 (1%) Query: 4 IHPSAVIAPGAQIDDSVEIGAYAVIGPDVRIGAGTRIGPHVVIEGHTRIGRDNEIFQFAS 63 IHP+A++ GA I + IG + ++GP V IG GT + HVV+ G T+IGRDNEI+QFAS Sbjct: 8 IHPTAIVEDGAVIGANAHIGPFCIVGPQVEIGEGTVLKSHVVVNGQTKIGRDNEIYQFAS 67 Query: 64 IGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLAHDC 123 IG QD KYAGEPT +EIGDRN IRE VT +RGTVQ G T++G+DN +M H+AHDC Sbjct: 68 IGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHVAHDC 127 Query: 124 QLGSHIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPFVTA 183 +G+ ILANNATLAGHV + D +GG T VHQFC IGAH M + V+QDVPP+V A Sbjct: 128 TVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIA 187 Query: 184 AGNRAVPSGINSEGLRRRGFSSEQIMEIKRAYKVIYRAGLPLEEAKQQLAEMEAKSAHSA 243 GN A P G+N EGL+RRGFS E ++ I+ AYK++YR+G L+EAK ++AE+ K Sbjct: 188 QGNHATPFGVNIEGLKRRGFSREGLVAIRNAYKLLYRSGKTLDEAKLEIAELAEKHP--- 244 Query: 244 EHIRLLREFIEASARGIIR 262 ++ EF E S RG IR Sbjct: 245 -EVKAFTEFFERSTRGPIR 262