BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1992.p         (103 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA4674 [R] COG3093 Plasmid maintenance system antidote protein P...   105   2e-23
Cgl2962 [R] COG3093 Plasmid maintenance system antidote protein ...    93   2e-19
asl2923 [R] COG3093 Plasmid maintenance system antidote protein ...    93   2e-19
Cgl1005 [R] COG3093 Plasmid maintenance system antidote protein ...    88   4e-18
SMc02477 [R] COG3093 Plasmid maintenance system antidote protein...    77   9e-15

>PA4674 [R] COG3093 Plasmid maintenance system antidote protein Pae
           Pseudomonas aeruginosa
          Length = 101

 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/97 (51%), Positives = 68/97 (70%)

Query: 4   ASNRMRPIHPGEILREEFLAPANLSANALAIALRVPATRIGEIVNERRGITPDTALRLAR 63
           A+N MRPIHPGEILR+EFL   ++S  ALA AL+V A  + +IV E+RGI+ D A+RL R
Sbjct: 2   ATNGMRPIHPGEILRDEFLMEFDISPAALARALKVSAPTVNDIVREQRGISADMAIRLGR 61

Query: 64  FFGGDAQSWLNLQMTHDLKIAQQENGARIEQEVQPMV 100
           +F   AQ W+NLQ  + L  A   NG +IE E++P++
Sbjct: 62  YFDTSAQFWMNLQSEYSLATAYAANGKQIEHEIEPLL 98


>Cgl2962 [R] COG3093 Plasmid maintenance system antidote protein Cgl
          Corynebacterium glutamicum
          Length = 121

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 55/80 (68%)

Query: 5  SNRMRPIHPGEILREEFLAPANLSANALAIALRVPATRIGEIVNERRGITPDTALRLARF 64
          +N  RP+ PGEILREEF+ P  LS N LA A+ VP  RI EIV+ +R IT DTALRLA +
Sbjct: 10 NNNDRPVMPGEILREEFMEPLGLSQNGLARAIGVPPRRINEIVHGKRAITADTALRLAAY 69

Query: 65 FGGDAQSWLNLQMTHDLKIA 84
           G D Q WLNLQ  +DL + 
Sbjct: 70 LGPDPQFWLNLQTHYDLSVT 89


>asl2923 [R] COG3093 Plasmid maintenance system antidote protein Nos Nostoc
           sp. PCC 7120
          Length = 97

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/91 (49%), Positives = 63/91 (69%), Gaps = 1/91 (1%)

Query: 10  PIHPGEILREEFLAPANLSANALAIALRVPATRIGEIVNERRGITPDTALRLARFFGGDA 69
           PIHPGEIL +E    A ++A+ LA  L VP  RI EI+N RRGIT DTALRL ++FG   
Sbjct: 5   PIHPGEILADEITELA-MTASDLARVLHVPKNRITEIINGRRGITADTALRLGQYFGTGG 63

Query: 70  QSWLNLQMTHDLKIAQQENGARIEQEVQPMV 100
           + WLNLQ  ++L++A+Q +G  I++ + P +
Sbjct: 64  EFWLNLQKNYELRLAEQTSGKEIQETICPRI 94


>Cgl1005 [R] COG3093 Plasmid maintenance system antidote protein Cgl
          Corynebacterium glutamicum
          Length = 99

 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 62/90 (68%), Gaps = 1/90 (1%)

Query: 10 PIHPGEILREEFLAPANLSANALAIALRVPATRIGEIVNERRGITPDTALRLARFFGGDA 69
          PIHPGEIL E+F+    L+ N +A+++ VP  RI EIV+ +R IT DTALRL R+FG D 
Sbjct: 8  PIHPGEILMEDFIKGFGLTQNKVAVSIGVPPRRINEIVHGKRSITADTALRLGRYFGIDP 67

Query: 70 QSWLNLQMTHDLKIAQQENGARIEQEVQPM 99
          Q WL+LQ  ++L++  ++ GA    ++ P+
Sbjct: 68 QFWLSLQTQYELEL-DRDAGAATYAQITPL 96


>SMc02477 [R] COG3093 Plasmid maintenance system antidote protein Sme
          Sinorhizobium meliloti
          Length = 88

 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/77 (51%), Positives = 51/77 (66%)

Query: 13 PGEILREEFLAPANLSANALAIALRVPATRIGEIVNERRGITPDTALRLARFFGGDAQSW 72
          PGEIL  EFL P N+SA  LA  + VPA RI EI+  RR IT DTALRL++ FG   + W
Sbjct: 2  PGEILASEFLEPMNISARKLAGHIGVPANRITEIIKGRRSITGDTALRLSKAFGTTPEFW 61

Query: 73 LNLQMTHDLKIAQQENG 89
          +NLQ  ++L+ A+   G
Sbjct: 62 INLQSHYELERARDAAG 78