BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1940.p (318 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1321 [M] COG0463 Glycosyltransferases involved in cell wall b... 493 e-139 Z3512 [M] COG0463 Glycosyltransferases involved in cell wall bio... 306 6e-83 ECs3142 [M] COG0463 Glycosyltransferases involved in cell wall b... 306 6e-83 yfbF [M] COG0463 Glycosyltransferases involved in cell wall biog... 305 1e-82 STM2298 [M] COG0463 Glycosyltransferases involved in cell wall b... 293 5e-79 >RSc1321 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Rso Ralstonia solanacearum Length = 332 Score = 493 bits (1269), Expect = e-139, Method: Compositional matrix adjust. Identities = 233/310 (75%), Positives = 270/310 (87%) Query: 3 PELSVVIPVYNEESGLSKLFERLYPALDALGYSYEVIFVNDGSRDRSAGILAEQYRLRPD 62 P LSVVIPVYNEE GL+ LF RLYPALDALG SYEV+F+NDGSRDRSA +LAEQ+R RPD Sbjct: 4 PALSVVIPVYNEEEGLAALFARLYPALDALGISYEVVFINDGSRDRSAAMLAEQFRARPD 63 Query: 63 VTRVVLFNGNYGQHMAIMAGFEATRGDVVVTLDADLQNPPEEIGNLVAKMREGYDYVGSI 122 TRVVLFNGNYGQHMAI+AGFE RG+ V+TLDADLQNPPEEIG LVAK+ EGYDYVG+I Sbjct: 64 TTRVVLFNGNYGQHMAILAGFEHARGERVITLDADLQNPPEEIGRLVAKLDEGYDYVGTI 123 Query: 123 RRKRQDSAWRTYASKAMNRLREKITRIKMTDQGNMLRAYGRNVIDLVNKCREVNTFVPAL 182 RR RQD+ +R AS+AMN LRE+IT IKMTDQG MLRAY R ++D +N+CREVNTF+PAL Sbjct: 124 RRNRQDTWFRRTASRAMNSLRERITHIKMTDQGCMLRAYSRPIVDTINRCREVNTFIPAL 183 Query: 183 AYTFSRNPTEIVVEHEERSAGESKYSFYSLIRLNFDLVTGFSLVPLQFFSLLGIGLSFAS 242 YTF++NPTEI V+HEER AGESKYS Y LIRLNFDLVTGFS+VPLQ+FS +G+ LS AS Sbjct: 184 GYTFAKNPTEIEVDHEERFAGESKYSLYKLIRLNFDLVTGFSVVPLQWFSAIGMLLSLAS 243 Query: 243 AALFILIVLRRLLIGAEVGGVFTLFAISFFLMGVILFSIGLLGEYIGRIYMQVRSRPRYV 302 A LF+L+V+RR ++GAEV GVFTLFAI+FFLMGV+LF IGLLGEYIGRIY QVR RPRY+ Sbjct: 244 AVLFVLLVVRRFVLGAEVQGVFTLFAITFFLMGVLLFGIGLLGEYIGRIYQQVRERPRYL 303 Query: 303 VQAILEQSTS 312 VQ +LE + + Sbjct: 304 VQGVLEDAPN 313 >Z3512 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis EcZ Escherichia coli O157:H7 EDL933 Length = 322 Score = 306 bits (783), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 156/314 (49%), Positives = 205/314 (65%), Gaps = 2/314 (0%) Query: 4 ELSVVIPVYNEESGLSKLFERLYPALDALGYSYEVIFVNDGSRDRSAGILAEQYRLRPDV 63 ++SVVIPVYNE+ L +L R A ++LG YE++ ++DGS D SA IL E + Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHILVEASQAENSH 68 Query: 64 TRVVLFNGNYGQHMAIMAGFEATRGDVVVTLDADLQNPPEEIGNLVAKMREGYDYVGSIR 123 +L N NYGQH AIMAGF GD+++TLDADLQNPPEEI LVAK EGYD VG++R Sbjct: 69 IVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGYDVVGTVR 128 Query: 124 RKRQDSAWRTYASKAMNRLREKITRIKMTDQGNMLRAYGRNVIDLVNKCREVNTFVPALA 183 + RQDS +R ASK +NRL ++ T M D G MLRAY R+++D + C E +TF+P LA Sbjct: 129 QNRQDSWFRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIVDAMLHCHERSTFIPILA 188 Query: 184 YTFSRNPTEIVVEHEERSAGESKYSFYSLIRLNFDLVTGFSLVPLQFFSLLGIGLSFASA 243 F+R EI V H ER GESKYSF LI L +DLVT + PL+ SLLG ++ Sbjct: 189 NIFARRAIEIPVHHAEREYGESKYSFMRLINLMYDLVTCLTTTPLRMLSLLGSIIAIGGF 248 Query: 244 ALFILIVLRRLLIGAEVG--GVFTLFAISFFLMGVILFSIGLLGEYIGRIYMQVRSRPRY 301 ++ +L+V+ RL G + GVF LFA+ F +G +GLLGEYIGRIY VR+RPRY Sbjct: 249 SIAVLLVILRLTFGPQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYTDVRARPRY 308 Query: 302 VVQAILEQSTSEDK 315 VQ ++ S+ E++ Sbjct: 309 FVQQVIRPSSKENE 322 >ECs3142 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Ecs Escherichia coli O157:H7 Length = 322 Score = 306 bits (783), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 156/314 (49%), Positives = 205/314 (65%), Gaps = 2/314 (0%) Query: 4 ELSVVIPVYNEESGLSKLFERLYPALDALGYSYEVIFVNDGSRDRSAGILAEQYRLRPDV 63 ++SVVIPVYNE+ L +L R A ++LG YE++ ++DGS D SA IL E + Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHILVEASQAENSH 68 Query: 64 TRVVLFNGNYGQHMAIMAGFEATRGDVVVTLDADLQNPPEEIGNLVAKMREGYDYVGSIR 123 +L N NYGQH AIMAGF GD+++TLDADLQNPPEEI LVAK EGYD VG++R Sbjct: 69 IVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGYDVVGTVR 128 Query: 124 RKRQDSAWRTYASKAMNRLREKITRIKMTDQGNMLRAYGRNVIDLVNKCREVNTFVPALA 183 + RQDS +R ASK +NRL ++ T M D G MLRAY R+++D + C E +TF+P LA Sbjct: 129 QNRQDSWFRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIVDAMLHCHERSTFIPILA 188 Query: 184 YTFSRNPTEIVVEHEERSAGESKYSFYSLIRLNFDLVTGFSLVPLQFFSLLGIGLSFASA 243 F+R EI V H ER GESKYSF LI L +DLVT + PL+ SLLG ++ Sbjct: 189 NIFARRAIEIPVHHAEREYGESKYSFMRLINLMYDLVTCLTTTPLRMLSLLGSIIAIGGF 248 Query: 244 ALFILIVLRRLLIGAEVG--GVFTLFAISFFLMGVILFSIGLLGEYIGRIYMQVRSRPRY 301 ++ +L+V+ RL G + GVF LFA+ F +G +GLLGEYIGRIY VR+RPRY Sbjct: 249 SIAVLLVILRLTFGPQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYTDVRARPRY 308 Query: 302 VVQAILEQSTSEDK 315 VQ ++ S+ E++ Sbjct: 309 FVQQVIRPSSKENE 322 >yfbF [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Eco Escherichia coli K12 Length = 322 Score = 305 bits (780), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 155/314 (49%), Positives = 205/314 (65%), Gaps = 2/314 (0%) Query: 4 ELSVVIPVYNEESGLSKLFERLYPALDALGYSYEVIFVNDGSRDRSAGILAEQYRLRPDV 63 ++SVVIPVYNE+ L +L R A ++LG YE++ ++DGS D SA +L E + Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVEASQAENSH 68 Query: 64 TRVVLFNGNYGQHMAIMAGFEATRGDVVVTLDADLQNPPEEIGNLVAKMREGYDYVGSIR 123 +L N NYGQH AIMAGF GD+++TLDADLQNPPEEI LVAK EGYD VG++R Sbjct: 69 IVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGYDVVGTVR 128 Query: 124 RKRQDSAWRTYASKAMNRLREKITRIKMTDQGNMLRAYGRNVIDLVNKCREVNTFVPALA 183 + RQDS +R ASK +NRL ++ T M D G MLRAY R+++D + C E +TF+P LA Sbjct: 129 QNRQDSWFRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIVDAMLHCHERSTFIPILA 188 Query: 184 YTFSRNPTEIVVEHEERSAGESKYSFYSLIRLNFDLVTGFSLVPLQFFSLLGIGLSFASA 243 F+R EI V H ER GESKYSF LI L +DLVT + PL+ SLLG ++ Sbjct: 189 NIFARRAIEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTTPLRMLSLLGSIIAIGGF 248 Query: 244 ALFILIVLRRLLIGAEVG--GVFTLFAISFFLMGVILFSIGLLGEYIGRIYMQVRSRPRY 301 ++ +L+V+ RL G + GVF LFA+ F +G +GLLGEYIGRIY VR+RPRY Sbjct: 249 SIAVLLVILRLTFGPQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYTDVRARPRY 308 Query: 302 VVQAILEQSTSEDK 315 VQ ++ S+ E++ Sbjct: 309 FVQQVIRPSSKENE 322 >STM2298 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Sty Salmonella typhimurium LT2 Length = 327 Score = 293 bits (749), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 149/306 (48%), Positives = 202/306 (66%), Gaps = 2/306 (0%) Query: 4 ELSVVIPVYNEESGLSKLFERLYPALDALGYSYEVIFVNDGSRDRSAGILAEQYRLRPDV 63 ++SVVIPVYNE+ L +L R A ++LG ++E++ ++DGS D SA ++ + + Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKAWEILLIDDGSSDSSAELMVKASQEADSH 68 Query: 64 TRVVLFNGNYGQHMAIMAGFEATRGDVVVTLDADLQNPPEEIGNLVAKMREGYDYVGSIR 123 +L N NYGQH AIMAGF GD+++TLDADLQNPPEEI LVAK EG+D VG++R Sbjct: 69 IISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGFDVVGTVR 128 Query: 124 RKRQDSAWRTYASKAMNRLREKITRIKMTDQGNMLRAYGRNVIDLVNKCREVNTFVPALA 183 + RQDS +R ASK +N L ++ T M D G MLRAY R +ID + +C E +TF+P LA Sbjct: 129 QNRQDSLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPIIDTMLRCHERSTFIPILA 188 Query: 184 YTFSRNPTEIVVEHEERSAGESKYSFYSLIRLNFDLVTGFSLVPLQFFSLLGIGLSFASA 243 F+R TEI V H ER G+SKYSF LI L +DLVT + PL+ SLLG ++ Sbjct: 189 NIFARRATEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTTPLRLLSLLGSVIAIGGF 248 Query: 244 ALFILIVLRRLLIGAEVG--GVFTLFAISFFLMGVILFSIGLLGEYIGRIYMQVRSRPRY 301 +L +L+++ RL +G + GVF LFA+ F +G +GLLGEYIGRIY VR+RPRY Sbjct: 249 SLSVLLIVLRLALGPQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYNDVRARPRY 308 Query: 302 VVQAIL 307 VQ ++ Sbjct: 309 FVQQVI 314