BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1933.p (208 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1312 [P] COG1392 Phosphate transport regulator (distant homol... 279 3e-75 CAC3094 [P] COG1392 Phosphate transport regulator (distant homol... 132 8e-31 AGl497 [P] COG1392 Phosphate transport regulator (distant homolo... 122 4e-28 SMc02862 [P] COG1392 Phosphate transport regulator (distant homo... 120 2e-27 SA0618 [P] COG1392 Phosphate transport regulator (distant homolo... 95 9e-20 >RSc1312 [P] COG1392 Phosphate transport regulator (distant homolog of PhoU) Rso Ralstonia solanacearum Length = 208 Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 132/208 (63%), Positives = 170/208 (81%) Query: 1 MFGRLMPTEGKFFDLFNQHAELAVKCAKEMVALMTNFDDLEIRVHAIEAVEKEADKVTHN 60 MFGR MPTEGKFF+ FNQHAE AV A + L+ + + E+ ++ +EK+AD++TH+ Sbjct: 1 MFGRFMPTEGKFFEYFNQHAECAVTAAHALKDLVNDLPNAEMHARNVQNIEKKADRITHD 60 Query: 61 AIELLHKTFITPLDRDDIHQLITRMDDILDLLEDAAQTISLYDIKSITPEAKRLAELCLS 120 +ELLHKTFITPLDRD+IH+LIT MDDI+DL+ED + TISLYD+ ++T EA++LA +S Sbjct: 61 TVELLHKTFITPLDRDEIHKLITTMDDIIDLMEDVSLTISLYDVTNVTDEARQLAAFSVS 120 Query: 121 CAEKVQAAVGLLSNMDNSRQILSICQEIDRLESDADHVMRAAMSKLFRDEPDVRTLIKLK 180 C E+V+ AV LL +M+N RQIL+I QEIDRLES+AD VMRAAM+KLFR E D++ LIKLK Sbjct: 121 CCEEVRKAVALLDDMNNGRQILTIAQEIDRLESEADRVMRAAMAKLFRTESDIKLLIKLK 180 Query: 181 AIYEILETVTDRCEDVANIIEGIIVENA 208 AIYE LE++TDRCEDVANIIEGI++ENA Sbjct: 181 AIYEQLESITDRCEDVANIIEGIVLENA 208 >CAC3094 [P] COG1392 Phosphate transport regulator (distant homolog of PhoU) Cac Clostridium acetobutylicum Length = 210 Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 122/211 (57%), Gaps = 4/211 (1%) Query: 1 MFGRLMPTEGKFFDLFNQHAELAVKCAKEMVALMTNFDDLEIRVHAIEAVEKEADKVTHN 60 MF L P + KFFDLF +++ + + + N +D E ++ I+ +E + D HN Sbjct: 1 MFS-LSPKDDKFFDLFIENSNTIYETSLLFRDYVNNPEDSENKLKVIKDMEHKGDHQQHN 59 Query: 61 AIELLHKTFITPLDRDDIHQLITRMDDILDLLEDAAQTISLYDIKSITPEAKRLAELCLS 120 I L+KTF+TP DR+DI+ + T MDDI+DL+E ++ ++D+ + T EAK LAEL + Sbjct: 60 IINELNKTFVTPFDREDIYSVATLMDDIIDLMEASSSRFVMFDVHNTTEEAKFLAELVVK 119 Query: 121 CAEKVQAAVGLLSNMDNSRQILSICQEIDRLESDADHVMRAAMSKLF---RDEPDVRTLI 177 AE++ + NM S+++ ++++E + D R A+ LF D D +I Sbjct: 120 AAEEIITLMTEFKNMKKSKKLQECIVNLNKIEEEGDLNFRRAVRILFTEYTDPKDFLHVI 179 Query: 178 KLKAIYEILETVTDRCEDVANIIEGIIVENA 208 K + IY+ +E D CE +AN+IEG+ ++NA Sbjct: 180 KWREIYQYMERTLDACETLANVIEGVAMKNA 210 >AGl497 [P] COG1392 Phosphate transport regulator (distant homolog of PhoU) Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 214 Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 117/211 (55%), Gaps = 5/211 (2%) Query: 1 MFGRLMPTEGKFFDLFNQHAELAVKCAKEMVALMTNFDDLEIRVHAIEAVEKEADKVTHN 60 +F +LMP E +FFD+F++H+E +K A + L++ D +E I A+E +AD +T Sbjct: 4 IFRKLMPREDRFFDMFSKHSETVIKAAAALDQLLSGID-VEKNCDLIVALENQADDITRE 62 Query: 61 AIELLHKTFITPLDRDDIHQLITRMDDILDLLEDAAQTISLYDIKSITPEAKRLAELCLS 120 + + ++FITP DR DI LI MDD +D++ +TI L++ P K + + Sbjct: 63 VLLAVRRSFITPFDRGDIKDLIQSMDDAIDMMHKTVKTIRLFEQSEFDPLMKEMGHEIVR 122 Query: 121 CAEKVQAAVGLLSNMD-NSRQILSICQEIDRLESDADHVMRAAMSKLFRD---EPDVRTL 176 A + A+ LL+ + N++++ +I +E+ R+E +D + + LFR + Sbjct: 123 AAGLIAEAIPLLNKVGANAQRLSAIAEEVTRVEGRSDDLHDQGLKDLFRRHGANGNAMAY 182 Query: 177 IKLKAIYEILETVTDRCEDVANIIEGIIVEN 207 + IY LE V DR EDVAN I GI++EN Sbjct: 183 MIGSEIYGELEKVVDRFEDVANEISGIVIEN 213 >SMc02862 [P] COG1392 Phosphate transport regulator (distant homolog of PhoU) Sme Sinorhizobium meliloti Length = 214 Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 115/210 (54%), Gaps = 3/210 (1%) Query: 1 MFGRLMPTEGKFFDLFNQHAELAVKCAKEMVALMTNFDDLEIRVHAIEAVEKEADKVTHN 60 +F +L+P E +FFDLF H+ + A+ + AL+ D+E I A+E EAD++T Sbjct: 4 LFRKLLPREDRFFDLFADHSRTVMGAAEALNALLAGGPDIESHCDRIVALENEADEITRE 63 Query: 61 AIELLHKTFITPLDRDDIHQLITRMDDILDLLEDAAQTISLYDIKSITPEAKRLAELCLS 120 + + ++FITP DR DI LI MDD +D++ +TI LY+ KS P + + + Sbjct: 64 VLLAVRRSFITPFDRGDIKDLIQSMDDAIDMMHKTVKTIRLYEQKSFDPGMQAMGAAVVE 123 Query: 121 CAEKVQAAVGLLSNMD-NSRQILSICQEIDRLESDADHVMRAAMSKLFR--DEPDVRTLI 177 A V A+ LLS + N+ ++ +I +E+ +E +D + + LF+ + I Sbjct: 124 AAHLVAEAIPLLSRIGANAHRLSAIAEEVTHVEDRSDQLHEQGLKDLFQRHGASNPMAYI 183 Query: 178 KLKAIYEILETVTDRCEDVANIIEGIIVEN 207 IY LE V DR EDVAN I GI++EN Sbjct: 184 IGSEIYGELEKVVDRFEDVANEISGIVIEN 213 >SA0618 [P] COG1392 Phosphate transport regulator (distant homolog of PhoU) Sau Staphylococcus aureus N315 Length = 205 Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 3/171 (1%) Query: 39 DLEIRVHAIEAVEKEADKVTHNAIELLHKTFITPLDRDDIHQLITRMDDILDLLEDAAQT 98 DL+ I+ E D++ H I L++TFITP++R+DI L +DD+LD +E+ A Sbjct: 37 DLKAYSDNIKTYESHGDELVHQVITDLNQTFITPIEREDILSLCDAIDDVLDAIEETAAM 96 Query: 99 ISLYDIKSITPEAKRLAELCLSCAEKVQAAVGLLSNMDNSR-QILSICQEIDRLESDADH 157 +Y I+ + +++ AVGLL + S +I SI I E++ D Sbjct: 97 FEMYSIEYTDEYMAEFVDNIQKAVAEMKLAVGLLVDKKLSHMRIHSI--NIKEFETNCDG 154 Query: 158 VMRAAMSKLFRDEPDVRTLIKLKAIYEILETVTDRCEDVANIIEGIIVENA 208 ++R ++ +F E D TLIK+K IYE +E + D+C+ VAN E II++N+ Sbjct: 155 ILRQSIKHIFNSETDPITLIKIKDIYESMEEIADKCQIVANNFETIIMKNS 205