BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1931.p         (150 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1310 [J] COG0359 Ribosomal protein L9 Rso Ralstonia solanacearum   198   3e-51
NMB1320 [J] COG0359 Ribosomal protein L9 Nme Neisseria meningiti...   167   5e-42
NMA1534 [J] COG0359 Ribosomal protein L9 NmA Neisseria meningiti...   167   7e-42
rplI [J] COG0359 Ribosomal protein L9 Eco Escherichia coli K12        148   4e-36
ZrplI [J] COG0359 Ribosomal protein L9 EcZ Escherichia coli O157...   148   4e-36

>RSc1310 [J] COG0359 Ribosomal protein L9 Rso Ralstonia solanacearum
          Length = 150

 Score =  198 bits (504), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 105/134 (78%), Positives = 122/134 (91%)

Query: 1   MQVILLEKIVNLGGLGDVVRVKDGFARNFLIPQRKARRATDAAIAEFEAKRAELEKAAAE 60
           MQ+ILLEK+VNLG LGDVVRVKDG+ARNFLIP ++ARRAT +AI EFEA+RAELEK AAE
Sbjct: 1   MQIILLEKVVNLGNLGDVVRVKDGYARNFLIPNKQARRATASAIQEFEARRAELEKLAAE 60

Query: 61  KLAAAQAQGEKLAGATVEVSQKAGVDGRLFGSVTNFDIAEALGKKGFPVEKAQVRLPNGP 120
           +LAAAQA+GEKL G T+++SQKAGVDGRLFGSVTN DIA AL  +GF VEKAQVR+PNGP
Sbjct: 61  RLAAAQAEGEKLNGLTLQLSQKAGVDGRLFGSVTNHDIAAALTAQGFKVEKAQVRMPNGP 120

Query: 121 LKTVGEHPVSVALH 134
           LKTVG+HPV+V+LH
Sbjct: 121 LKTVGDHPVAVSLH 134


>NMB1320 [J] COG0359 Ribosomal protein L9 Nme Neisseria meningitidis MC58
          Length = 150

 Score =  167 bits (424), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/145 (65%), Positives = 110/145 (75%)

Query: 1   MQVILLEKIVNLGGLGDVVRVKDGFARNFLIPQRKARRATDAAIAEFEAKRAELEKAAAE 60
           MQ+ILLEKI  LG LGD+V VK+G+ARNFLIP  KA+RAT+A + EFEA+RAELE   AE
Sbjct: 1   MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANMKEFEARRAELEAKQAE 60

Query: 61  KLAAAQAQGEKLAGATVEVSQKAGVDGRLFGSVTNFDIAEALGKKGFPVEKAQVRLPNGP 120
            LA A+ + EKL G TV V+QKAGVDGRLFGSVTN DIA A+   G    KA VRLPNGP
Sbjct: 61  ILADARVRQEKLDGQTVTVAQKAGVDGRLFGSVTNADIAAAIVAAGIEAVKANVRLPNGP 120

Query: 121 LKTVGEHPVSVALHTDVVVDVIIAV 145
           LK VGE+ V VALHTD V  + +AV
Sbjct: 121 LKAVGEYEVEVALHTDAVAKITVAV 145


>NMA1534 [J] COG0359 Ribosomal protein L9 NmA Neisseria meningitidis Z2491
          Length = 150

 Score =  167 bits (423), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 94/145 (64%), Positives = 110/145 (75%)

Query: 1   MQVILLEKIVNLGGLGDVVRVKDGFARNFLIPQRKARRATDAAIAEFEAKRAELEKAAAE 60
           MQ+ILLEKI  LG LGD+V VK+G+ARNFLIP  KA+RAT+A + EFEA+RAELE   AE
Sbjct: 1   MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANMKEFEARRAELEAKQAE 60

Query: 61  KLAAAQAQGEKLAGATVEVSQKAGVDGRLFGSVTNFDIAEALGKKGFPVEKAQVRLPNGP 120
            LA A+ + EKL G T+ V+QKAGVDGRLFGSVTN DIA A+   G    KA VRLPNGP
Sbjct: 61  ILADARVRQEKLDGQTITVAQKAGVDGRLFGSVTNADIAAAIVAAGIEAVKANVRLPNGP 120

Query: 121 LKTVGEHPVSVALHTDVVVDVIIAV 145
           LK VGE+ V VALHTD V  + +AV
Sbjct: 121 LKAVGEYEVEVALHTDAVAKITVAV 145


>rplI [J] COG0359 Ribosomal protein L9 Eco Escherichia coli K12
          Length = 149

 Score =  148 bits (374), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 83/149 (55%), Positives = 104/149 (69%), Gaps = 1/149 (0%)

Query: 1   MQVILLEKIVNLGGLGDVVRVKDGFARNFLIPQRKARRATDAAIAEFEAKRAELEKAAAE 60
           MQVILL+K+ NLG LGD V VK G+ARNFL+PQ KA  AT   I  FEA+RAELE   AE
Sbjct: 1   MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAE 60

Query: 61  KLAAAQAQGEKL-AGATVEVSQKAGVDGRLFGSVTNFDIAEALGKKGFPVEKAQVRLPNG 119
            LAAA A+ EK+ A  TV ++ KAG +G+LFGS+   DIA+A+   G  V K++VRLPNG
Sbjct: 61  VLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNG 120

Query: 120 PLKTVGEHPVSVALHTDVVVDVIIAVKGE 148
            L+T GEH VS  +H++V   VI+ V  E
Sbjct: 121 VLRTTGEHEVSFQVHSEVFAKVIVNVVAE 149


>ZrplI [J] COG0359 Ribosomal protein L9 EcZ Escherichia coli O157:H7
           EDL933
          Length = 149

 Score =  148 bits (374), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 83/149 (55%), Positives = 104/149 (69%), Gaps = 1/149 (0%)

Query: 1   MQVILLEKIVNLGGLGDVVRVKDGFARNFLIPQRKARRATDAAIAEFEAKRAELEKAAAE 60
           MQVILL+K+ NLG LGD V VK G+ARNFL+PQ KA  AT   I  FEA+RAELE   AE
Sbjct: 1   MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAE 60

Query: 61  KLAAAQAQGEKL-AGATVEVSQKAGVDGRLFGSVTNFDIAEALGKKGFPVEKAQVRLPNG 119
            LAAA A+ EK+ A  TV ++ KAG +G+LFGS+   DIA+A+   G  V K++VRLPNG
Sbjct: 61  VLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNG 120

Query: 120 PLKTVGEHPVSVALHTDVVVDVIIAVKGE 148
            L+T GEH VS  +H++V   VI+ V  E
Sbjct: 121 VLRTTGEHEVSFQVHSEVFAKVIVNVVAE 149