BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1851.p (464 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl175_1 [M] COG3206 Uncharacterized protein involved in exopoly... 112 2e-24 XF2369 [M] COG3206 Uncharacterized protein involved in exopolysa... 108 3e-23 CC0164_1 Non COG 103 9e-22 SMb20961_1 [M] COG3206 Uncharacterized protein involved in exopo... 93 1e-18 VC0937_1 [M] COG3206 Uncharacterized protein involved in exopoly... 92 4e-18 >AGl175_1 [M] COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 539 Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 122/482 (25%), Positives = 220/482 (45%), Gaps = 33/482 (6%) Query: 2 NLSQFILILQAHRKIILLILSVTVIVALAVSLALPKQYRATSSVVLNYKASDPV-TGLVV 60 +S+FI IL+ R+ + + + +A P +Y+A +++ L+ + + T VV Sbjct: 13 GISRFISILRERRRAVFICFLASFAIAAIGYARTPIRYKAEATLALDVRKLQALPTESVV 72 Query: 61 SPQALPGFMP---TQVAIINSPSVALAVV-----DSLKLADQQEVKDAYN------ADKH 106 SP LP P T++ II S S+A V+ D L Q A N D Sbjct: 73 SP--LPQESPVLRTELDIIGSRSMAERVLVILQKDRLLEGRQTNSDRATNDVTTLGNDAE 130 Query: 107 GDLDIRNWLAGLLLKKLDAVASKESSVIDITFRAEDPQFAALVANAFAAAYQNVSMQLKL 166 + N L+ + + S I I++ A DP AA VANAF AY + + L+ Sbjct: 131 TSKKVDN-----LMTNVRVMNDGRSYTIYISYYAGDPALAAKVANAFGEAYIDYQIDLQT 185 Query: 167 DPTRKASSYFNDQIKVLRDAYEQAQVKLSKYQEEHGITNIDNRTDVETNRLNDLSTQLVM 226 TR+ S++ +++ LR A E+++ + S+++E+ G+ N +++ RL+ L+ +L Sbjct: 186 TATRRVSAWLGERLVSLRTALEESERQASQFREKSGLINTGG-LPLQSQRLSSLNVELTT 244 Query: 227 AQAALSEAQSRRRQA----AGGGAVDSPDVNANALIQTLKSNLAASEARFEQASKRLGVN 282 QA L+ +++R A G + +V ++ IQ L++ A Q + V Sbjct: 245 LQAKLAGSRARLATALALQKSGDGLGITEVLSSPTIQLLRAEQARVIRAIAQIDESGAVM 304 Query: 283 HPDYQAAKAERDGLQAQLAAATNAISASVGSNATILAKRESEIRAEFEAQKRKVLEMNRT 342 P+ ++ L Q+ + I A++ + + K+ E+ A +R + + Sbjct: 305 SPERPQLSSQLSSLNKQIDSEIAQIIAALRNEIEVNEKQRQEVEASLNDVQRAISTTDMA 364 Query: 343 RDELAVLSRELESAQRAYELTSQRFAQTSLEGQSNQSDISLLSAAVPPPGPSSPRIVLNL 402 + L RE + + YE R+ QT + ++ ++S+A+P P+SP L Sbjct: 365 MVQSGQLDREAAANRSIYETYLARYKQTIEQDGIATAEARIISSAMPSRKPTSPDAGLWG 424 Query: 403 ILAVFVGSILGVMAALGLELTNRRVRSEHDLVEELGLPVLGAITRPPAAARRRFGFGRSK 462 ++A+ +G G+ A L T+R V S L ++ GL V+G I R FG ++K Sbjct: 425 LVALLLGCSTGLATAFILNFTDRSVGSITSLQQKTGLNVIGRIPRIS------FGEFQNK 478 Query: 463 PA 464 P Sbjct: 479 PG 480 >XF2369 [M] COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis Xfa Xylella fastidiosa 9a5c Length = 467 Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 112/449 (24%), Positives = 214/449 (47%), Gaps = 49/449 (10%) Query: 1 MNLSQFILILQAHRKIILLILSVTVIVALAVSLALPKQYRATSSVVLNYKASDPVTGLVV 60 +NL ++ +L + +I+ + +AL VSL LP+++RAT+++ + + + Sbjct: 20 LNLLDYLRVLVSQYWLIIGVAIGATSLALGVSLLLPQKFRATATLQIERDVPKVMNVDNL 79 Query: 61 SPQALP---GFMPTQVAIINSPSVALAVVDSLKLADQQEVK----DAYNADKHGDLDIRN 113 P P F TQ ++ S S+A AV+ + L + +K + ++ ++ RN Sbjct: 80 IPVESPLDRDFYQTQYQLLQSRSLARAVIRKMNLDREPMLKPLVDKVLSKVQNLPVNTRN 139 Query: 114 W-----LAGLLLKKLDAVASKESSVIDITFRAEDPQFAALVANAFAAAYQNVSMQLKLDP 168 L ++L L S ++ + F + DP +A VANA+A + + Q + + Sbjct: 140 TAIESALIEMMLNSLKIEPILNSRLVYVHFDSHDPTLSAKVANAYAKMFIENNQQRRSNA 199 Query: 169 TRKASSYFNDQIKVLRDAYEQAQVKLSKYQEEHGITNI-DNRTDVETNRLNDLSTQLVMA 227 A Y +++ LR ++++ + Y + I ++ D + + L+DL+ L A Sbjct: 200 FSFAMKYLAGRLEQLRIKVDKSERNVVAYSTDEKIVSVGDEKPSLSAQNLSDLNALLASA 259 Query: 228 QAALSEAQSRRRQAAGGGAVDSPDVNANALIQTLKSNLAASEARFEQASKRLGVNHPDYQ 287 Q A++ RQA+ G + P V +N L+Q+L++ A ++Q +L + P+Y Sbjct: 260 QNERIRAEASWRQASIGDGLSIPQVLSNLLVQSLRTEQANMVNEYQQ---KLSMFKPEY- 315 Query: 288 AAKAERDGLQAQLAAATNAISASVGSNATILAKRESEIRAEFEAQKRK---------VLE 338 E L+A++ T I NA +L R+S +++++EA R+ VLE Sbjct: 316 ---PEMQRLKARIKENTKQI------NAEVLNIRQS-LKSQYEATLRQENLLNDRIAVLE 365 Query: 339 MNRTRDEL---------AVLSRELESAQRAYELTSQRFAQTSLEGQSNQSDISLLSAAVP 389 +DEL +L RE E+ ++ Y+ QR+ + S+ G ++++++ AA Sbjct: 366 ----KDELDLKTRLIRYNLLEREAETDRQLYDALLQRYKEISVLGDVGSNNVTVVDAADI 421 Query: 390 PPGPSSPRIVLNLILAVFVGSILGVMAAL 418 P P SP +++N IL G LG+ A+ Sbjct: 422 PSRPISPNLLMNTILGGIFGVFLGLTVAM 450 >CC0164_1 Non COG Length = 502 Score = 103 bits (257), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 118/445 (26%), Positives = 208/445 (46%), Gaps = 44/445 (9%) Query: 36 PKQYRATSSVVLNYKASDPVTGLVVSPQALPG---FMPTQVAIINSPSVALAVVDSLKLA 92 PK Y A + V+L+ + + VT + LP + T+V ++ S S+A VV LKL Sbjct: 57 PK-YTAIAQVMLDVR-QEQVTDMSAVLSGLPADSSVVDTEVEVLKSRSLAARVVKELKL- 113 Query: 93 DQQEVKDAY--NADKHGDLDIRNWL-----AGLLLKKLDAVASKESS------------- 132 +Q + Y NA+ G WL A L +D+V + S Sbjct: 114 EQDPYFNPYLSNAEGAG-----AWLSTVRKAAAPLDNVDSVELQRRSERIVDSVLGGLKV 168 Query: 133 -------VIDITFRAEDPQFAALVANAFAAAYQNVSMQLKLDPTRKASSYFNDQIKVLRD 185 +I I + +DP+ A+ +ANAFA Y ++ K D T+KA+ + + ++ LR+ Sbjct: 169 RRAGLTYLISIEYTHKDPKRASELANAFANLYLTEQLEAKFDATQKANEWLDTRVGELRE 228 Query: 186 AYEQAQVKLSKYQEEHGITNIDNRTDVETNRLNDLSTQLVMAQAALSEAQSR----RRQA 241 + A + +Y+ ++ + + + T E ++ L+ QL +++A+ +E +R R+Q Sbjct: 229 QVQAADAAVQQYKIQNNLLSAEGATLTE-QEISSLNQQLALSRASQAETDARLNIARQQL 287 Query: 242 AGGGAVDSPDVNANA-LIQTLKSNLAASEARFEQASKRLGVNHPDYQAAKAERDGLQAQL 300 A G + + N+ ++Q L+ + A+ R G HP+ A+ E + Q+ Sbjct: 288 ARGSTGEDVGESLNSPVVQQLRKQRSEKSAQVADLGGRYGDRHPELLKARRELADIDGQI 347 Query: 301 AAATNAISASVGSNATILAKRESEIRAEFEAQKRKVLEMNRTRDELAVLSRELESAQRAY 360 A I +++ + A + +R + + A K + NR LA L R+ +S + Y Sbjct: 348 QAEIRRIISNLEAQAQVARQRTGSVASSVAASKGTLAGNNRASIGLAELERKAQSVKTLY 407 Query: 361 ELTSQRFAQTSLEGQSNQSDISLLSAAVPPPGPSSPRIVLNLILAVFVGSILGVMAALGL 420 E RF QT+ + Q+D ++S A P PS P+ LNL L + + GV A + Sbjct: 408 ETLLSRFKQTTTQEGIEQADARVVSPAKIPTRPSYPKPTLNLALGLVLALGAGVAAVVLA 467 Query: 421 ELTNRRVRSEHDLVEELGLPVLGAI 445 E+ + +E ++ LGLP LGA+ Sbjct: 468 EILMAGLFTEDEVERRLGLPYLGAV 492 >SMb20961_1 [M] COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis Sme Sinorhizobium meliloti Length = 488 Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 103/461 (22%), Positives = 198/461 (42%), Gaps = 50/461 (10%) Query: 8 LILQAHRKIILLILSVTVIVALAVSLAL--PKQYRATSSVVLN-----YKASDPVTGLVV 60 L+ R+ L+ V + +AL + L Y + + ++L+ Y +P V Sbjct: 33 LVAAVFRRARLVAAFVVLFIALGAAYLLFATPYYTSMTQILLDENLSKYAEEEPTP---V 89 Query: 61 SPQALPGFMPTQVAIINSPSVALAVVDSLKLADQQEVKDAYNADKHGDLDIRNWL----- 115 + Q L + + V I+ S +AL VVD LKL++ + N + ++ WL Sbjct: 90 NSQMLDTQIASAVEILKSGELALRVVDKLKLSENDTI---LNPPRSPVDMVKEWLKTATG 146 Query: 116 ---------------------AGLLLKKLDAVASKESSVIDITFRAEDPQFAALVANAFA 154 A ++ + L SSV+ + FR+ DP AA +A +A Sbjct: 147 LFSGGPDVTEEAARNGRRQKAAAIIQQSLAVERVSRSSVVAVAFRSSDPLLAATIARGYA 206 Query: 155 AAYQNVSMQLKLDPTRKASSYFNDQIKVLRDAYEQAQVKLSKYQEEHGITNIDNRTDVET 214 +AY + + T +AS + +++ L+ + A ++++ ++ E+G+T E Sbjct: 207 SAYLTDQLNANFEATERASVWLQERLTDLQQRSQAAALEVAHFRAENGLTAARGELMSE- 265 Query: 215 NRLNDLSTQLVMAQAALSEAQSRRRQA----------AGGGAVDSPDVNANALIQTLKSN 264 ++ DL++QL++AQA + A +R Q A A S N++I+ L++ Sbjct: 266 QQMADLNSQLIVAQADTASASARYDQYKSIVDQGPENAVKNATISSKEGDNSVIRDLRTR 325 Query: 265 LAASEARFEQASKRLGVNHPDYQAAKAERDGLQAQLAAATNAISASVGSNATILAKRESE 324 R + S G +HP + +AE++ + Q+ ++AS + + RE Sbjct: 326 YLTVGKREREVSDNFGADHPQAVSLRAEQEDVARQIYQELQQLTASYKNEYEVAQSREES 385 Query: 325 IRAEFEAQKRKVLEMNRTRDELAVLSRELESAQRAYELTSQRFAQTSLEGQSNQSDISLL 384 +R + K + + +L L ++ + + YE R+ Q + + + ++ Sbjct: 386 LRKSIQGIAGKTSDASEQLVQLRELEQKAAALKTLYESYLGRYEQATQQQSFPIAKARVI 445 Query: 385 SAAVPPPGPSSPRIVLNLILAVFVGSILGVMAALGLELTNR 425 S A P PSSP+ + L L+ +G ++G A LE R Sbjct: 446 SEAGVPVSPSSPKKTMTLALSAVLGMMVGGAYAAFLEFRER 486 >VC0937_1 [M] COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis Vch Vibrio cholerae Length = 435 Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 99/419 (23%), Positives = 192/419 (45%), Gaps = 57/419 (13%) Query: 6 FILILQAHRKIILLILSVTVIVALAVSLALPKQYRATSSVVLNYKAS-----DPVTGLVV 60 F ++L +I+L + VT I L V L++ +Y A +++++ + + V GL Sbjct: 18 FNVLLNYKWRILLFSVMVTAITLLFV-LSMRSEYTARATILIESTQAKAVSIEEVYGLDT 76 Query: 61 SPQALPGFMPTQVAIINSPSVALAVVDSLKLADQQEVKDAYNADKHGDLDIR--NWLAGL 118 Q + TQ+ I+ S ++A V++ L LA E + +D L R W+ L Sbjct: 77 KSQE---YYLTQIEILKSDTIAQEVIERLDLASDPEFDLSPESDASPSLKERLVEWMPFL 133 Query: 119 L-LKKLDAVAS-------------------------KESSVIDITFRAEDPQFAALVANA 152 K+ + VA +++ +++I + A DP+ AA +AN Sbjct: 134 QGFKQEETVADPDLEAYRQNRLILYKFKRGMEISPIRKTQLVNIYYTAGDPKLAAKIANE 193 Query: 153 FAAAYQNVSMQLKLDPTRKASSYFNDQIKVLRDAYEQAQVKLSKYQEEHGITNIDNRTDV 212 A Y + ++ KL+ KA+++ N +++ LR +++ KL + + G+ ++ + Sbjct: 194 IARVYMDSHLEAKLEVELKANTWLNTRMEELRTQLRESEAKLQAFLQAEGLVDVQGVEGL 253 Query: 213 ETNRLNDLSTQL-------VMAQAALSEAQSRRRQAAGGGAVDS-PDVNANALIQTLKSN 264 T L +L++Q+ V A+ A S + + A+ S P+++ + I+ LK Sbjct: 254 ATQELEELTSQMNKARDRRVAAETLYQVANSYSKNDSDLTALSSIPEISNHPTIRDLKVA 313 Query: 265 LAASEARFEQASKRLGVNHPDYQAAKAE----RDGLQAQLAAATNAISASVGSNATILAK 320 +E + + SKR G HP ++A A+ R L+A+L N I N + A Sbjct: 314 EVDAERKVSEFSKRYGPKHPKLKSASAQLEAVRKNLRAELRQLLNGI------NNELQAA 367 Query: 321 RESE--IRAEFEAQKRKVLEMNRTRDELAVLSRELESAQRAYELTSQRFAQTSLEGQSN 377 ++SE ++ EF +K + + + + L RE+++ + ++L R +TS G N Sbjct: 368 KQSERSLQTEFNQRKSEFQTLTVKNAKYSELKREVQTNRELFDLFLARQKETSASGDFN 426