BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1830.p         (60 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

msr2149 [N] COG1724 Predicted periplasmic or secreted lipoprotei...    79   2e-15
CC3184 Non COG                                                         72   4e-13
SMc04441 [N] COG1724 Predicted periplasmic or secreted lipoprote...    72   5e-13
MA2135 [N] COG1724 Predicted periplasmic or secreted lipoprotein...    62   5e-10
YPO1818 [N] COG1724 Predicted periplasmic or secreted lipoprotei...    61   6e-10

>msr2149 [N] COG1724 Predicted periplasmic or secreted lipoprotein Mlo
          Mesorhizobium loti
          Length = 62

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 47/60 (78%)

Query: 1  MDSATLIQRLKANGWYLVHTVGSHHQFKHRTMPGKVTVPHPKKDLPLATQNSILKQAGLK 60
          M+SA +I++L+A+GW+ V   GSH QFKHR   G+VTVPHPK+D+P+ T  SI KQ+GLK
Sbjct: 1  MNSAEIIRQLQADGWFEVARKGSHAQFKHRDKQGRVTVPHPKRDIPIGTLRSIEKQSGLK 60


>CC3184 Non COG
          Length = 62

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 42/60 (70%)

Query: 1  MDSATLIQRLKANGWYLVHTVGSHHQFKHRTMPGKVTVPHPKKDLPLATQNSILKQAGLK 60
          M+S  +I  L+A+GW  V   GSH QFKH T  G+VTVPHPK+DLPL T  SI +QA LK
Sbjct: 1  MNSREVIAALEADGWVEVARRGSHAQFKHPTKSGRVTVPHPKRDLPLGTLRSIERQADLK 60


>SMc04441 [N] COG1724 Predicted periplasmic or secreted lipoprotein Sme
          Sinorhizobium meliloti
          Length = 62

 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 42/60 (70%)

Query: 1  MDSATLIQRLKANGWYLVHTVGSHHQFKHRTMPGKVTVPHPKKDLPLATQNSILKQAGLK 60
          M S  +I  L+ +GWY V T GSH QFKH    G+VTVPHPK+DLP+ T  SI KQ+GLK
Sbjct: 1  MKSGDIIAALQKDGWYEVATKGSHVQFKHPKKHGRVTVPHPKRDLPIGTLRSIEKQSGLK 60


>MA2135 [N] COG1724 Predicted periplasmic or secreted lipoprotein Mac
          Methanosarcina acetivorans str.C2A
          Length = 64

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 40/61 (65%), Gaps = 1/61 (1%)

Query: 1  MDSATLIQRLKANGWYLVHTVGSHHQFKHRTMPGKVTVP-HPKKDLPLATQNSILKQAGL 59
          M    +I+ L+A+GWYLV T GSH Q+KH   PG+VT+  H   DL   T NSILKQA L
Sbjct: 1  MKVREVIKHLEADGWYLVATKGSHRQYKHPAKPGRVTIAGHSGDDLAPGTLNSILKQAQL 60

Query: 60 K 60
          K
Sbjct: 61 K 61


>YPO1818 [N] COG1724 Predicted periplasmic or secreted lipoprotein Ype
           Yersinia pestis
          Length = 122

 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 36/57 (63%)

Query: 3   SATLIQRLKANGWYLVHTVGSHHQFKHRTMPGKVTVPHPKKDLPLATQNSILKQAGL 59
           S+ LI+ L+ NGW L+   GSHHQFKH      +TVPHPKKD+   T   ILK A L
Sbjct: 65  SSELIKLLETNGWKLMRVKGSHHQFKHPDFAAVITVPHPKKDVKPGTLRQILKDANL 121