BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1740.p         (82 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

all1682 [P] COG2239 Mg/Co/Ni transporter MgtE (contains CBS doma...    28   6.9  
VCA0962 Non COG                                                        27   7.9  

>all1682 [P] COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) Nos
           Nostoc sp. PCC 7120
          Length = 465

 Score = 27.7 bits (60), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 4   KSVIVASLLTALALPVFAQTGGTAAPAAATA 34
           +S+I A  + A+ +P+F+ TGGT    A T 
Sbjct: 315 QSIIAAVPVLAVIMPIFSNTGGTVGIQALTV 345


>VCA0962 Non COG
          Length = 402

 Score = 27.3 bits (59), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 3/43 (6%)

Query: 2  KTKSVIVASLLTALALPVF---AQTGGTAAPAAATAAAPAKAE 41
          KT+  +V+SL+TAL LP F   AQT     P  A   A    E
Sbjct: 4  KTQIAVVSSLITALILPTFTSYAQTHPLEVPPKAQNRAQNSLE 46