BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1653.p         (82 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Rv3358 [S] COG4115 Uncharacterized protein conserved in bacteria...   102   2e-22
MT3466 [S] COG4115 Uncharacterized protein conserved in bacteria...   102   2e-22
AGc3658 [S] COG4115 Uncharacterized protein conserved in bacteri...   100   2e-21
SP1740 [S] COG4115 Uncharacterized protein conserved in bacteria...    97   6e-21
SA2195 [S] COG4115 Uncharacterized protein conserved in bacteria...    92   4e-19

>Rv3358 [S] COG4115 Uncharacterized protein conserved in bacteria Mtu
          Mycobacterium tuberculosis H37Rv
          Length = 85

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/80 (56%), Positives = 57/80 (71%)

Query: 2  FTAAAWDDYQYWQTQDRKTLKRINQLIREAQRTPFDGIGKPEPLKANLSGFWSRRIGDVN 61
          F   AW+D+ +W   DRKT +RI +LI E QR PF GIGKPEPL+  LSG+WSRRI D +
Sbjct: 6  FDPDAWEDFLFWLAADRKTARRITRLIGEIQRDPFSGIGKPEPLQGELSGYWSRRIDDEH 65

Query: 62 RLVYEATDTQLNIVSCRYHY 81
          RLVY A D ++ ++  RYHY
Sbjct: 66 RLVYRAGDDEVTMLKARYHY 85


>MT3466 [S] COG4115 Uncharacterized protein conserved in bacteria MtC
          Mycobacterium tuberculosis CDC1551
          Length = 85

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/80 (56%), Positives = 57/80 (71%)

Query: 2  FTAAAWDDYQYWQTQDRKTLKRINQLIREAQRTPFDGIGKPEPLKANLSGFWSRRIGDVN 61
          F   AW+D+ +W   DRKT +RI +LI E QR PF GIGKPEPL+  LSG+WSRRI D +
Sbjct: 6  FDPDAWEDFLFWLAADRKTARRITRLIGEIQRDPFSGIGKPEPLQGELSGYWSRRIDDEH 65

Query: 62 RLVYEATDTQLNIVSCRYHY 81
          RLVY A D ++ ++  RYHY
Sbjct: 66 RLVYRAGDDEVTMLKARYHY 85


>AGc3658 [S] COG4115 Uncharacterized protein conserved in bacteria Atu
          Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 89

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 64/86 (74%), Gaps = 4/86 (4%)

Query: 1  MFTAAAWDDYQYWQTQDRKTLKRINQLIREAQRTPFDGIGKPEPLKANLSGFWSRRIGDV 60
          ++T ++WDDY++WQ  D + +++IN LIR A+RTPF G+GKPEPLK +++G+WSRRI   
Sbjct: 4  VWTLSSWDDYEFWQRTDARMVEKINDLIRNAKRTPFAGLGKPEPLKGDMAGYWSRRITAE 63

Query: 61 NRLVY----EATDTQLNIVSCRYHYE 82
          +R VY      ++ +L ++ CR+HY+
Sbjct: 64 HRFVYRVSGSGSEQRLEVIQCRFHYQ 89


>SP1740 [S] COG4115 Uncharacterized protein conserved in bacteria Spn
          Streptococcus pneumoniae TIGR4
          Length = 84

 Score = 97.4 bits (241), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 55/80 (68%)

Query: 2  FTAAAWDDYQYWQTQDRKTLKRINQLIREAQRTPFDGIGKPEPLKANLSGFWSRRIGDVN 61
          FT  AW DY YWQ QD+KTLKRIN+LI++ QR PF GIGKPEPLK +  G WSRRI   N
Sbjct: 5  FTEDAWADYCYWQNQDKKTLKRINKLIKDIQRDPFTGIGKPEPLKYDYQGAWSRRIDAEN 64

Query: 62 RLVYEATDTQLNIVSCRYHY 81
          RL+Y      +  +S + HY
Sbjct: 65 RLIYMMDGDSVAFLSFKDHY 84


>SA2195 [S] COG4115 Uncharacterized protein conserved in bacteria Sau
          Staphylococcus aureus N315
          Length = 88

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 38/81 (46%), Positives = 58/81 (71%), Gaps = 1/81 (1%)

Query: 2  FTAAAWDDYQYWQTQDRKTLKRINQLIREAQRT-PFDGIGKPEPLKANLSGFWSRRIGDV 60
          F+  A++DY+Y+Q  ++K +K+IN+L++   R    +GIGKPE LK+NL+G++SRRI   
Sbjct: 8  FSPQAFEDYKYFQQNNKKMVKKINELLKSIDRNGALEGIGKPEKLKSNLTGYYSRRINHE 67

Query: 61 NRLVYEATDTQLNIVSCRYHY 81
          +RLVY   D  + I SC+YHY
Sbjct: 68 HRLVYTVDDNHIKIASCKYHY 88