BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1652.p         (84 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

yefM [D] COG2161 Antitoxin of toxin-antitoxin stability system E...    72   2e-13
SA2196 [D] COG2161 Antitoxin of toxin-antitoxin stability system...    65   4e-11
all0172 [D] COG2161 Antitoxin of toxin-antitoxin stability syste...    60   1e-09
ssr2754 [D] COG2161 Antitoxin of toxin-antitoxin stability syste...    59   3e-09
AGc3659 [D] COG2161 Antitoxin of toxin-antitoxin stability syste...    58   6e-09

>yefM [D] COG2161 Antitoxin of toxin-antitoxin stability system Eco
          Escherichia coli K12
          Length = 92

 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 52/79 (65%)

Query: 1  MRTVHFTDARSNLKSVIDRVVEDADVTLITRRDAPNAVLMSQDYFDSLMETVHLLRSPAN 60
          MRT+ +++AR NL + + + VED    LITR++    VLMS + ++SL ET +LLRSPAN
Sbjct: 10 MRTISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPAN 69

Query: 61 VAHLEKSIAQLRAGKLKEK 79
             L  SI  L++GK  EK
Sbjct: 70 ARRLMDSIDSLKSGKGTEK 88


>SA2196 [D] COG2161 Antitoxin of toxin-antitoxin stability system Sau
          Staphylococcus aureus N315
          Length = 83

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 50/71 (70%)

Query: 5  HFTDARSNLKSVIDRVVEDADVTLITRRDAPNAVLMSQDYFDSLMETVHLLRSPANVAHL 64
          +++ AR NLK+++ +V +D+D+  +T  D  N V+MS+  ++S+MET++L ++P N  HL
Sbjct: 5  NYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHL 64

Query: 65 EKSIAQLRAGK 75
           +SIA L  GK
Sbjct: 65 AQSIADLERGK 75


>all0172 [D] COG2161 Antitoxin of toxin-antitoxin stability system Nos
          Nostoc sp. PCC 7120
          Length = 135

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 47/79 (59%)

Query: 3  TVHFTDARSNLKSVIDRVVEDADVTLITRRDAPNAVLMSQDYFDSLMETVHLLRSPANVA 62
          T  +T AR  L  + D+V  + D  +ITRR+A N  L+  D   SL+ET HLLRSP N  
Sbjct: 21 TYTYTQARDRLSELCDKVTSERDFVVITRRNAENVALIPVDELSSLLETAHLLRSPRNAE 80

Query: 63 HLEKSIAQLRAGKLKEKML 81
           L +++ + ++G ++ + L
Sbjct: 81 RLLRALDRAKSGVVESQSL 99


>ssr2754 [D] COG2161 Antitoxin of toxin-antitoxin stability system Syn
          Synechocystis
          Length = 87

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 1/81 (1%)

Query: 1  MRTVHFTDARSNLKSVIDRVVEDADVTLITRRDAPNAVLMSQDYFDSLMETVHLLRSPAN 60
          M+ +  T A+ +L  +I+ V+ D + T+++      AVL+S D F+S  ET++LL +P N
Sbjct: 1  MKAITTTQAKDHLDELINAVISDLEPTIVSNNQGQQAVLISLDEFNSWQETLYLLSNPTN 60

Query: 61 VAHLEKSIAQLRAGK-LKEKM 80
            HL  SI Q   G+ +K+K+
Sbjct: 61 AEHLMASIKQAETGQIIKQKL 81


>AGc3659 [D] COG2161 Antitoxin of toxin-antitoxin stability system Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 128

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 46/79 (58%)

Query: 1   MRTVHFTDARSNLKSVIDRVVEDADVTLITRRDAPNAVLMSQDYFDSLMETVHLLRSPAN 60
           M  V FT+ R N  +  DRV+E     L+TR+     V++++  ++S+ ET+HLL +PAN
Sbjct: 45  MANVRFTEFRQNFATHFDRVLETRAPLLVTRQGKEAVVVLAEGEYESMQETLHLLSNPAN 104

Query: 61  VAHLEKSIAQLRAGKLKEK 79
            + L  S+ +L  G   E+
Sbjct: 105 ASRLRASMGELERGDTIER 123