BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1625.p         (124 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM3293 [U] COG1314 Preprotein translocase subunit SecG Sty Salm...    99   3e-21
secG [U] COG1314 Preprotein translocase subunit SecG Eco Escheri...    98   5e-21
ECs4054 [U] COG1314 Preprotein translocase subunit SecG Ecs Esch...    98   5e-21
ZsecG [U] COG1314 Preprotein translocase subunit SecG EcZ Escher...    96   1e-20
RSc2063 [U] COG1314 Preprotein translocase subunit SecG Rso Rals...    96   2e-20

>STM3293 [U] COG1314 Preprotein translocase subunit SecG Sty Salmonella
           typhimurium LT2
          Length = 110

 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 77/107 (71%), Gaps = 2/107 (1%)

Query: 4   LFFVVVVVQVLAALAIIGLVLLQHGKGADMGAAFGSGASGSLFGATGSSNFLSKSTAVAA 63
           ++  ++VV ++ A+ ++GL++LQ GKGADMGA+FG+GAS +LFG++GS NF+++ TAV A
Sbjct: 1   MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTAVLA 60

Query: 64  GIFFVATLGLTFIGNHHVSQSGGVMDNLQAPAVPAQQAAPAAPAAPT 110
            +FF+ +L L  I N + +  G   +NL APA   +Q  PAAPA PT
Sbjct: 61  TLFFIISLVLGNI-NSNKTNKGSEWENLSAPA-KTEQTQPAAPAQPT 105


>secG [U] COG1314 Preprotein translocase subunit SecG Eco Escherichia
           coli K12
          Length = 110

 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 77/107 (71%), Gaps = 2/107 (1%)

Query: 4   LFFVVVVVQVLAALAIIGLVLLQHGKGADMGAAFGSGASGSLFGATGSSNFLSKSTAVAA 63
           ++  ++VV ++ A+ ++GL++LQ GKGADMGA+FG+GAS +LFG++GS NF+++ TA+ A
Sbjct: 1   MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLA 60

Query: 64  GIFFVATLGLTFIGNHHVSQSGGVMDNLQAPAVPAQQAAPAAPAAPT 110
            +FF+ +L L  I N + +  G   +NL APA   +Q  PAAPA PT
Sbjct: 61  TLFFIISLVLGNI-NSNKTNKGSEWENLSAPA-KTEQTQPAAPAKPT 105


>ECs4054 [U] COG1314 Preprotein translocase subunit SecG Ecs Escherichia
           coli O157:H7
          Length = 110

 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 77/107 (71%), Gaps = 2/107 (1%)

Query: 4   LFFVVVVVQVLAALAIIGLVLLQHGKGADMGAAFGSGASGSLFGATGSSNFLSKSTAVAA 63
           ++  ++VV ++ A+ ++GL++LQ GKGADMGA+FG+GAS +LFG++GS NF+++ TA+ A
Sbjct: 1   MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLA 60

Query: 64  GIFFVATLGLTFIGNHHVSQSGGVMDNLQAPAVPAQQAAPAAPAAPT 110
            +FF+ +L L  I N + +  G   +NL APA   +Q  PAAPA PT
Sbjct: 61  TLFFIISLVLGNI-NSNKTNKGSEWENLSAPA-KTEQTQPAAPAKPT 105


>ZsecG [U] COG1314 Preprotein translocase subunit SecG EcZ Escherichia
           coli O157:H7 EDL933
          Length = 110

 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 76/107 (71%), Gaps = 2/107 (1%)

Query: 4   LFFVVVVVQVLAALAIIGLVLLQHGKGADMGAAFGSGASGSLFGATGSSNFLSKSTAVAA 63
           ++  ++VV ++ A+ + GL++LQ GKGADMGA+FG+GAS +LFG++GS NF+++ TA+ A
Sbjct: 1   MYEALLVVFLIVAIGLXGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLA 60

Query: 64  GIFFVATLGLTFIGNHHVSQSGGVMDNLQAPAVPAQQAAPAAPAAPT 110
            +FF+ +L L  I N + +  G   +NL APA   +Q  PAAPA PT
Sbjct: 61  TLFFIISLVLGNI-NSNKTNKGSEWENLSAPA-KTEQTQPAAPAKPT 105


>RSc2063 [U] COG1314 Preprotein translocase subunit SecG Rso Ralstonia
          solanacearum
          Length = 115

 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 61/69 (88%)

Query: 1  MNTLFFVVVVVQVLAALAIIGLVLLQHGKGADMGAAFGSGASGSLFGATGSSNFLSKSTA 60
          M  L  +++V Q+L+AL +IGLVLLQHGKGAD+GAAFGSGASGSLFGATGS+NFLS++TA
Sbjct: 1  MAILKTLLLVAQILSALGVIGLVLLQHGKGADVGAAFGSGASGSLFGATGSANFLSRTTA 60

Query: 61 VAAGIFFVA 69
          + A +FFVA
Sbjct: 61 ILATVFFVA 69