BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1603.p         (117 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

MK1258 [R] COG0595 Predicted hydrolase of the metallo-beta-lacta...    35   0.035
VC1416_2 Non COG                                                       32   0.29 
CT566 Non COG                                                          30   2.0  
YJL013c Non COG                                                        28   5.1  
mll4043 [L] COG0582 Integrase Mlo Mesorhizobium loti                   28   6.7  

>MK1258 [R] COG0595 Predicted hydrolase of the metallo-beta-lactamase
           superfamily Mka Methanopyrus kandleri AV19
          Length = 375

 Score = 35.4 bits (80), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 61  DGECLVLPHDGWVGVLAPQGGQLLCLQPLPRPWYAPLSTLL 101
           DG  L+ P D W GVL   G  ++ +   P PW+A  +  L
Sbjct: 23  DGGVLLRPADSWAGVLVDTGSTIVAVDAGPNPWHAEDTDYL 63


>VC1416_2 Non COG
          Length = 447

 Score = 32.3 bits (72), Expect = 0.29,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 4   ALTEPTTTQTLTLRP-GQHLQVWLAAGSQLICQAPLVRVTESARWQQDQLVSRQSRLSDG 62
            ++  +  QT+T+ P GQ   V +AA        P +R+ ESA W Q  L S+ + L+  
Sbjct: 155 GISAESQGQTITMTPSGQQATVGVAAKGFGTSATPELRLLESAPWYQKSLKSQFASLTSA 214

Query: 63  ECL 65
           E L
Sbjct: 215 ENL 217


>CT566 Non COG
          Length = 330

 Score = 29.6 bits (65), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 26  LAAGSQLICQAPLVRVTESARWQQDQLVSRQSRLSDG--ECLVLPHD--GWV 73
           L   S+LI Q    RV E+   Q+D+++SR   L     E +VLP +  GW+
Sbjct: 132 LYVQSELIPQGAEYRVIEALLAQKDEIISRAQELGSDCLETVVLPEEEAGWL 183


>YJL013c Non COG
          Length = 515

 Score = 28.1 bits (61), Expect = 5.1,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 27 AAGSQLICQAPLVRVTESARWQQDQLVSRQSRLSDGECLVLPHDGWVGVLAPQGG 81
          AA S+ I Q PLV + +     + +L+     LSD   L L +  W+    PQGG
Sbjct: 43 AALSKAIHQ-PLVEINQVKSSFEQRLIDELPALSDPITLYLEYIKWLNNAYPQGG 96


>mll4043 [L] COG0582 Integrase Mlo Mesorhizobium loti
          Length = 398

 Score = 27.7 bits (60), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)

Query: 45  ARWQQ--DQLVSRQSRLSDGECLVLPH 69
           ARW+   D+L+SRQS+LS G    LP+
Sbjct: 196 ARWRGHLDKLLSRQSKLSRGHHAALPY 222