BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1584.p (309 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1132 [O] COG1281 Disulfide bond chaperones of the HSP33 famil... 348 9e-96 PA5193 [O] COG1281 Disulfide bond chaperones of the HSP33 family... 243 3e-64 NMA0441 [O] COG1281 Disulfide bond chaperones of the HSP33 famil... 225 8e-59 NMB2000 [O] COG1281 Disulfide bond chaperones of the HSP33 famil... 224 2e-58 VC2736 [O] COG1281 Disulfide bond chaperones of the HSP33 family... 218 1e-56 >RSc1132 [O] COG1281 Disulfide bond chaperones of the HSP33 family Rso Ralstonia solanacearum Length = 338 Score = 348 bits (893), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 189/338 (55%), Positives = 236/338 (69%), Gaps = 29/338 (8%) Query: 1 MKDTLQKFLVDNAPVRGELVEISDTWRQVQARRDYPVAVRTLLGEMLAAAALLSANLKFN 60 M D L+KF+ D APVRGELV + TW++V RR YP VRTLLG M+AAAALLSANLKFN Sbjct: 1 MTDELKKFVFDAAPVRGELVRLEGTWQEVLRRRHYPAPVRTLLGGMMAAAALLSANLKFN 60 Query: 61 GMIVMQIHGDGPVKLLVVECDSELQLRATAKLADDAAIAEDATLTDLVNAAGHGRFVITL 120 G ++MQ+HGDGP+++LVVEC+S+L +RATAKL + A IA+DATL LVN GHGRF ITL Sbjct: 61 GALIMQLHGDGPLRMLVVECNSDLSMRATAKLVEGAQIADDATLASLVNQHGHGRFAITL 120 Query: 121 DPKDKLPGQQAYQGVVPLDGE-----SVATVIENYMLRSEQLDTKLWLAADENVSRGLLL 175 DP+DKLPGQQ YQG+VPL E S+ V+E+YM SEQLDT+LWLAAD+ ++ G+LL Sbjct: 121 DPQDKLPGQQPYQGIVPLSDEHGPLTSMTAVLEHYMQTSEQLDTRLWLAADDKIASGMLL 180 Query: 176 QKLPSIGGT-----------AARTAQPEGE------LEAWNHMVMLGDTLKREELLCTDI 218 Q+LPS GG T QP E L+ W + LG TL+R+ELL + Sbjct: 181 QRLPSYGGAMEGHPGHGPAEVGETGQPLREDVHGQDLDTWERVCQLGATLRRDELLEQPV 240 Query: 219 ATLMHRLFWEQT----IRVFDPVHPQFHCSCSREKVGNMLKMLGQEEVAEALSQM-EKLA 273 TL+ RL+WE+ IR+F+PV P+F CSC+R +VG ML+ LGQEE+ + L + K+ Sbjct: 241 DTLIKRLYWEEMEHAGIRMFEPVLPRFRCSCTRLRVGAMLRTLGQEEIDDILQERGGKVE 300 Query: 274 IDCDFCGQHYEFDAVDCAQLFVAD--VGSASEASGARH 309 IDC+FCGQHY FDAVDCAQLF D V AS RH Sbjct: 301 IDCEFCGQHYAFDAVDCAQLFAQDTVVQGVQSASDQRH 338 >PA5193 [O] COG1281 Disulfide bond chaperones of the HSP33 family Pae Pseudomonas aeruginosa Length = 297 Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 137/310 (44%), Positives = 190/310 (61%), Gaps = 18/310 (5%) Query: 2 KDTLQKFLVDNAPVRGELVEISDTWRQVQARRDYPVAVRTLLGEMLAAAALLSANLKFNG 61 D Q+FL D+ VRGE+V++ ++ +V A+ YP V LLGEMLAAA+LL LKF+G Sbjct: 4 SDQSQRFLFDDTDVRGEMVDLERSYSEVLAKHPYPEPVAQLLGEMLAAASLLCGTLKFDG 63 Query: 62 MIVMQIHGDGPVKLLVVECDSELQLRATAKLADDAAIAEDATLTDLVNAAGHGRFVITLD 121 ++V+Q G V LL+VEC S+ Q+R A+ + + +I DA + +L+ G +T+D Sbjct: 64 LLVLQARSSGAVPLLMVECSSDRQVRGLARYSAE-SIGADAGMQELMP---EGVLTLTVD 119 Query: 122 PKDKLPGQQAYQGVVPLDGESVATVIENYMLRSEQLDTKLWLAADENVSRGLLLQKLPSI 181 P + GQ+ YQG+V L+G ++A + NY SEQL T+ WL A+ +RGLLLQ+LP Sbjct: 120 P---VKGQR-YQGIVALEGVNLAECLSNYFASSEQLPTRFWLNANGRRARGLLLQQLP-- 173 Query: 182 GGTAARTAQPEGELEAWNHMVMLGDTLKREELLCTDIATLMHRLFWEQTIRVFDPVHPQF 241 A R PE +W H+ L DTL EELL D T++HRL+ E+T+R+F+P F Sbjct: 174 ---ADRLKDPEAREASWQHLTTLADTLTAEELLALDNETVLHRLYHEETVRLFEPQPLVF 230 Query: 242 HCSCSREKVGNMLKMLGQEEVAEALSQME-KLAIDCDFCGQHYEFDAVDCAQLFVADVGS 300 HCSCSRE+ N L LGQ + L + E ++IDC FC Q Y FDA D AQLF G+ Sbjct: 231 HCSCSRERSANALVSLGQADCERLLEEEEGSISIDCQFCNQRYLFDASDVAQLF---AGA 287 Query: 301 ASEA-SGARH 309 S+ S RH Sbjct: 288 GSQGPSETRH 297 >NMA0441 [O] COG1281 Disulfide bond chaperones of the HSP33 family NmA Neisseria meningitidis Z2491 Length = 328 Score = 225 bits (574), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 127/296 (42%), Positives = 179/296 (60%), Gaps = 16/296 (5%) Query: 3 DTLQKFLVDNAPVRGELVEISDTWRQVQARRDYPVAVRTLLGEMLAAAALLSANLKFNGM 62 D +F+ D+ PVRG V + + W+ + +++YP A+R LGE+LAA LLS NLK G Sbjct: 36 DVRTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPAAIRRALGELLAAGVLLSGNLKNEGT 95 Query: 63 IVMQIHGDGPVKLLVVECDSELQLRATAKLADDAAIAEDATLTDLVNAAGHGRFVITLDP 122 +++Q+ G G +K+LV E S+ +RATA+ + A IA+D +L DL+ G FV+TL P Sbjct: 96 LIVQVQGQGRLKMLVAEATSDRTVRATARWDETAEIADDESLGDLLGEG--GVFVLTLQP 153 Query: 123 KDKLPGQQAYQGVVPLDGESVATVIENYMLRSEQLDTKLWLAADENVSRGLLLQKLPSIG 182 KD P +QGVVPL+G+ +A ++ NYM RSEQLDT + L+A + + GLL+Q+LP Sbjct: 154 KDGEP----WQGVVPLEGDGIAQMLVNYMKRSEQLDTHIVLSASDEAAGGLLVQRLP--- 206 Query: 183 GTAARTAQPEGELEAWNHMVMLGDTLKREELLCTDIATLMHRLFWEQTIRVFDPVHPQFH 242 + + EAW H+ L TL EEL D +++RLF E RVF+P +F Sbjct: 207 -------EEVLDEEAWEHVSTLARTLTAEELAGLDAQHVLYRLFHETPPRVFEPETFEFS 259 Query: 243 CSCSREKVGNMLKMLGQEEVAEALSQMEKLAIDCDFCGQHYEFDAVDCAQLFVADV 298 C+CSR KV +ML MLG EEV + + + +DCDFC Y FD D LF DV Sbjct: 260 CTCSRGKVSDMLLMLGGEEVGGVVVEQGSIEVDCDFCHSKYVFDETDVNALFGEDV 315 >NMB2000 [O] COG1281 Disulfide bond chaperones of the HSP33 family Nme Neisseria meningitidis MC58 Length = 302 Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 127/296 (42%), Positives = 178/296 (60%), Gaps = 16/296 (5%) Query: 3 DTLQKFLVDNAPVRGELVEISDTWRQVQARRDYPVAVRTLLGEMLAAAALLSANLKFNGM 62 D +F+ D+ PVRG V + + W+ + +++YP A+R LGE+LAA LLS NLK G Sbjct: 10 DVRTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPAAIRRALGELLAAGVLLSGNLKNEGT 69 Query: 63 IVMQIHGDGPVKLLVVECDSELQLRATAKLADDAAIAEDATLTDLVNAAGHGRFVITLDP 122 +++Q+ G G +K+LV E S+ +RATA+ + A IA+D +L DL+ G FV+TL P Sbjct: 70 LIVQVQGRGRLKMLVAEAASDRTVRATARWDETAEIADDESLGDLLGEG--GVFVLTLQP 127 Query: 123 KDKLPGQQAYQGVVPLDGESVATVIENYMLRSEQLDTKLWLAADENVSRGLLLQKLPSIG 182 KD P +QGVVPL+G +A ++ NYM RSEQLDT + L+A + + GLL+Q+LP Sbjct: 128 KDGEP----WQGVVPLEGGGIAQMLVNYMKRSEQLDTHIVLSASDEAAGGLLVQRLP--- 180 Query: 183 GTAARTAQPEGELEAWNHMVMLGDTLKREELLCTDIATLMHRLFWEQTIRVFDPVHPQFH 242 + + EAW H+ L TL EEL D +++RLF E RVF+P +F Sbjct: 181 -------EEVLDEEAWEHVSTLARTLTAEELAGLDAQHVLYRLFHETPPRVFEPETFEFS 233 Query: 243 CSCSREKVGNMLKMLGQEEVAEALSQMEKLAIDCDFCGQHYEFDAVDCAQLFVADV 298 C+CSR KV +ML MLG EEV + + + +DCDFC Y FD D LF DV Sbjct: 234 CTCSRGKVSDMLLMLGGEEVGGVVVEQGSIEVDCDFCHSKYVFDETDVNALFGEDV 289 >VC2736 [O] COG1281 Disulfide bond chaperones of the HSP33 family Vch Vibrio cholerae Length = 296 Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 114/305 (37%), Positives = 185/305 (60%), Gaps = 23/305 (7%) Query: 2 KDTLQKFLVDNAPVRGELVEISDTWRQVQARRDYPVAVRTLLGEMLAAAALLSANLKFNG 61 + L ++L + VRGELV++ DT++Q+ + ++YP AV+ L+GE+L A +LL+A LKF G Sbjct: 8 NNMLHRYLFKDLSVRGELVQLDDTYQQMISSQEYPAAVQHLIGELLVATSLLTATLKFEG 67 Query: 62 MIVMQIHGDGPVKLLVVECDSELQLRATAKLADDAAIAEDATLTDLVNAAGHGRFVITLD 121 I +Q+ G+GPV L+V+ D+ Q+R A+ D IA+DA+L D++ G G VIT++ Sbjct: 68 SITLQLQGNGPVSLVVINGDNNQQVRGVARWKGD--IADDASLHDML---GKGHLVITIE 122 Query: 122 PKDKLPGQQAYQGVVPLDGESVATVIENYMLRSEQLDTKLWLAADENVSR----GLLLQK 177 PK + YQGVV L+G+++A V+E Y RSEQL T+LW+ ++ + G+LLQ Sbjct: 123 PKQG----ERYQGVVGLEGDTLAQVLEGYFERSEQLKTRLWIRVGKHDGKACAAGMLLQI 178 Query: 178 LPSIGGTAARTAQPEGELEAWNHMVMLGDTLKREELLCTDIATLMHRLFWEQTIRVFDPV 237 +P G+A E + H+ L +T+K EEL L++RL+ ++T+++F P Sbjct: 179 VPDGKGSA----------EDFEHLEQLTNTIKDEELFALPAEELLYRLYNQETVQLFTPQ 228 Query: 238 HPQFHCSCSREKVGNMLKMLGQEEVAEALSQMEKLAIDCDFCGQHYEFDAVDCAQLFVAD 297 F C CSRE+ + + +EE+ + L+Q +A+ CD+CG Y FD+ A+L+ Sbjct: 229 QISFRCGCSRERSAAAIVTVAREEINDILAQDGAVALHCDYCGTTYSFDSAQVAELYAPS 288 Query: 298 VGSAS 302 + S Sbjct: 289 SANGS 293