BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1523.p (327 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3445 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 345 6e-95 PA2594 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 271 1e-72 ssuA [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transpor... 266 6e-71 ZycbO [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transpo... 263 3e-70 RSp1383 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 263 4e-70 >PA3445 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 323 Score = 345 bits (886), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 174/291 (59%), Positives = 216/291 (74%), Gaps = 3/291 (1%) Query: 37 VQAQE--TKLLRIGYQKAANTLVLLKAHGALEKRLQPLGVEVKWAEFAAGPQLLEALNVG 94 VQA E LRIGYQK TLVLLKA G LEKRL GV+V+W EF GPQLLE LNVG Sbjct: 22 VQADEKSANTLRIGYQKYG-TLVLLKARGTLEKRLAEDGVKVQWTEFPGGPQLLEGLNVG 80 Query: 95 SVDFGYVGEAPPVFAQAAGADFVYTAYEIPTPEAEALLVPKNSPIKSVAELKGKKVAFNK 154 S+DFG GE PPVFAQAAGAD +Y AYE P P +EA+L+PK+SPI+SVAELKG+KVA NK Sbjct: 81 SIDFGVTGETPPVFAQAAGADLLYVAYEPPAPTSEAILLPKDSPIRSVAELKGRKVALNK 140 Query: 155 GSDVHWLVVALLKKAGLQYSDIQPVYLAPADARAAFERGAVDAWAIWDPFQAAAEKQVGA 214 GS+VH+L+V L++AGL+YSDIQPVYL PADARAAFER +VDAW IWDP+QAAAEKQ+ A Sbjct: 141 GSNVHYLLVRALEQAGLKYSDIQPVYLPPADARAAFERHSVDAWVIWDPYQAAAEKQLSA 200 Query: 215 RRLASGAGVVSHHQFFLSARPFAAKNPQVQKILLEEITREGEWVRTHTAEAAAQLSPIQG 274 R L G +V +HQF+L+ R +A ++PQV L++EI G+W R + + Q++P+ G Sbjct: 201 RVLVDGRELVDNHQFYLATRTYAQRHPQVLDKLVDEIREVGDWSRANPQQVTEQVAPLLG 260 Query: 275 LDADIIETGLKRYAHIYKPVDAQVLAEQQKIADAFYELKLIPKPLKVSDAV 325 L ADI T +KR + + + V+ QQKIAD F +LKLIPKPL + D + Sbjct: 261 LPADITLTAVKRQGYGAQLITPAVVEAQQKIADTFTQLKLIPKPLSIKDVI 311 >PA2594 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 319 Score = 271 bits (694), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 142/307 (46%), Positives = 203/307 (66%), Gaps = 4/307 (1%) Query: 15 RSLARLSAIALGALTIGLGASPVQAQETKLLRIGYQKAANTLVLLKAHGALEKRLQPLGV 74 R R AI A + G QA+E +LRIG+QK++ L L+++ G E+ L G+ Sbjct: 3 RPFLRRLAIVFAASVVLSGIGGAQAEE--VLRIGFQKSSTLLTLIRSQGTFERELARQGI 60 Query: 75 EVKWAEFAAGPQLLEALNVGSVDFGY-VGEAPPVFAQAAGADFVYTAYEIPTPEAEALLV 133 V W EF +G LLE+LNVG+VD V + PVFAQAAGA Y A E P+P A+A+LV Sbjct: 61 RVSWHEFPSGLPLLESLNVGNVDLSADVADTVPVFAQAAGARLTYFARETPSPAAQAILV 120 Query: 134 PKNSPIKSVAELKGKKVAFNKGSDVHWLVVALLKKAGLQYSDIQPVYLAPADARAAFERG 193 ++SP+KS+AELKG+++A K + H+L++A L AGL++SDIQP YL PAD RAAFE G Sbjct: 121 GEHSPLKSLAELKGRRIAVTKAAGSHYLLIAALASAGLEFSDIQPAYLTPADGRAAFENG 180 Query: 194 AVDAWAIWDPFQAAAEKQVGARRLASGAGVVSHHQFFLSARPFAAKNPQVQKILLEEITR 253 VDAW WDP+ A+A++Q AR LA G G+ S+ +++L++ +A K+P+V + + E+ R Sbjct: 181 KVDAWVTWDPYVASAQRQQRARVLADGQGLASYQRYYLASSDYARKHPEVLQQVFAELQR 240 Query: 254 EGEWVRTHTAEAAAQLSPIQG-LDADIIETGLKRYAHIYKPVDAQVLAEQQKIADAFYEL 312 G W+++H A+AA L P+ G LDA +E R ++ +PV A L EQQ+IADAF+ Sbjct: 241 TGRWLKSHPADAAKVLGPLWGNLDAATVEQANARRSYDVQPVSADGLDEQQRIADAFHAQ 300 Query: 313 KLIPKPL 319 L+PKP+ Sbjct: 301 GLLPKPV 307 >ssuA [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Eco Escherichia coli K12 Length = 333 Score = 266 bits (679), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 140/278 (50%), Positives = 185/278 (66%), Gaps = 3/278 (1%) Query: 45 LRIGYQKAANTLVLLKAHGALEKRLQPLGVEVKWAEFAAGPQLLEALNVGSVDFGYVGEA 104 LRIGYQK + +VL K+H LEKR ++ W EF AGPQ+LEALNVGS+D G G+ Sbjct: 43 LRIGYQKGSIGMVLAKSHQLLEKRYPE--SKISWVEFPAGPQMLEALNVGSIDLGSTGDI 100 Query: 105 PPVFAQAAGADFVYTAYEIPTPEAEALLVPKNSPIKSVAELKGKKVAFNKGSDVHWLVVA 164 PP+FAQAAGAD VY E P P+AE +LV +NSPIK+VA+LKG KVAF KGS H L++ Sbjct: 101 PPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLR 160 Query: 165 LLKKAGLQYSDIQPVYLAPADARAAFERGAVDAWAIWDPFQAAAEKQVGARRLASGAGVV 224 L++AGL+++DIQP YL PADARAAF++G VDAWAIWDP+ +AA Q G R L G + Sbjct: 161 ALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLN 220 Query: 225 SHHQFFLSARPFAAKNPQVQKILLEEITREGEWVRTHTAEAAAQLSPIQGLDADIIETGL 284 F+L+ARP+A KN + +L + R+ ++ A L+ GL A +I + L Sbjct: 221 QTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYL 280 Query: 285 K-RYAHIYKPVDAQVLAEQQKIADAFYELKLIPKPLKV 321 R KPV+A+V A QQ+ AD FYE +L+PK + + Sbjct: 281 DHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVDI 318 >ZycbO [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components EcZ Escherichia coli O157:H7 EDL933 Length = 333 Score = 263 bits (673), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 144/318 (45%), Positives = 200/318 (62%), Gaps = 11/318 (3%) Query: 11 LPRRR--SLARLSAIALGALTIGLGASPVQAQETKLLRIGYQKAANTLVLLKAHGALEKR 68 +P R LA + +++ + + +SP + LRIGYQK + +VL K+H LEKR Sbjct: 13 MPMRNIIKLALVGLLSVSTIVVAAESSP------EALRIGYQKGSIGMVLAKSHQLLEKR 66 Query: 69 LQPLGVEVKWAEFAAGPQLLEALNVGSVDFGYVGEAPPVFAQAAGADFVYTAYEIPTPEA 128 ++ W EF AGPQ+LEALNVGS+D G G+ PP+FAQAAGAD +Y E P P+A Sbjct: 67 YP--QSKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLLYVGVEPPKPKA 124 Query: 129 EALLVPKNSPIKSVAELKGKKVAFNKGSDVHWLVVALLKKAGLQYSDIQPVYLAPADARA 188 E +LV +NSPIK+ A+LKG KVAF KGS H L++ L++AGL+++DIQP YL PADARA Sbjct: 125 EVILVAENSPIKTAADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARA 184 Query: 189 AFERGAVDAWAIWDPFQAAAEKQVGARRLASGAGVVSHHQFFLSARPFAAKNPQVQKILL 248 AF++G VDAWAIWDP+ +AA Q G R L G + F+L+ARP+A KN + +L Sbjct: 185 AFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVL 244 Query: 249 EEITREGEWVRTHTAEAAAQLSPIQGLDADIIETGLK-RYAHIYKPVDAQVLAEQQKIAD 307 + R+ ++ A L+ GL A +I + L R KPV+A+V A QQ+ AD Sbjct: 245 ATFSEADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTAD 304 Query: 308 AFYELKLIPKPLKVSDAV 325 FYE +L+PK + + + Sbjct: 305 LFYENRLVPKKVDIRQRI 322 >RSp1383 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Rso Ralstonia solanacearum Length = 334 Score = 263 bits (672), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 138/283 (48%), Positives = 182/283 (64%), Gaps = 1/283 (0%) Query: 45 LRIGYQKAANTLVLLKAHGALEKRLQPLGVEVKWAEFAAGPQLLEALNVGSVDFGYVGEA 104 +RIG+QKA L +LKA GAL+ L LG ++W EF AGPQLLEALN GS+DFGY G Sbjct: 44 VRIGFQKA-GLLAVLKAQGALDTPLAELGYRIEWKEFPAGPQLLEALNAGSIDFGYTGAP 102 Query: 105 PPVFAQAAGADFVYTAYEIPTPEAEALLVPKNSPIKSVAELKGKKVAFNKGSDVHWLVVA 164 P VFAQAAGA FVY E EAL V SP + VA+LKGK++A KGS ++L+V Sbjct: 103 PAVFAQAAGARFVYVGAEPGASANEALFVRDGSPARGVADLKGKRIALQKGSSSNYLLVQ 162 Query: 165 LLKKAGLQYSDIQPVYLAPADARAAFERGAVDAWAIWDPFQAAAEKQVGARRLASGAGVV 224 LLK+AGL DIQP+YL PA+ARAAFE GAVDAW +WDP+ A A+ + R LA G+ Sbjct: 163 LLKRAGLTVQDIQPIYLPPAEARAAFESGAVDAWVVWDPYYALAQTALKVRTLADYTGLP 222 Query: 225 SHHQFFLSARPFAAKNPQVQKILLEEITREGEWVRTHTAEAAAQLSPIQGLDADIIETGL 284 S F+ + F +P+ +L ++ G WV H E AA LSP G+ ++ET L Sbjct: 223 SPFNFYEATPGFVQAHPRAVNAILAQLRTTGLWVNRHPRETAALLSPKLGIAPPVVETWL 282 Query: 285 KRYAHIYKPVDAQVLAEQQKIADAFYELKLIPKPLKVSDAVLK 327 +R + P+ +V+A QQ++AD F++ KLIP+P+ V AV + Sbjct: 283 RRVPYGVTPITPEVIAAQQQVADLFHQQKLIPRPVSVQGAVWR 325