BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1453.p (232 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA5504 [P] COG2011 ABC-type metal ion transport system, permease... 229 5e-60 CC2668 [P] COG2011 ABC-type metal ion transport system, permease... 229 5e-60 XF0874 [P] COG2011 ABC-type metal ion transport system, permease... 210 3e-54 BH3480 [P] COG2011 ABC-type metal ion transport system, permease... 194 2e-49 FN0659 [P] COG2011 ABC-type metal ion transport system, permease... 182 7e-46 >PA5504 [P] COG2011 ABC-type metal ion transport system, permease component Pae Pseudomonas aeruginosa Length = 225 Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 144/214 (67%), Positives = 181/214 (84%) Query: 19 IDWSEVGDATLETLAMTGGSLLFTVLLGLPLGILLFLTNRGQLLEQRGLYWVLSLVVNVL 78 IDW E+ A+++T M GGSLLFTV+LGLPLG+LLFLT Q+ EQ+ +Y +LSLVVN+L Sbjct: 12 IDWYEIWLASVDTFWMLGGSLLFTVVLGLPLGVLLFLTGPRQMFEQKAVYTLLSLVVNIL 71 Query: 79 RSVPFLILLILLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDCGILEAC 138 RS+PF+ILLI++IP T+ + GTSLGV GAIPPLV+G PFFARL E+ LRE+D GI+EA Sbjct: 72 RSLPFIILLIVMIPLTVLITGTSLGVAGAIPPLVVGATPFFARLVETALREVDKGIIEAT 131 Query: 139 TAMGARRRQIIFGALLPEALPGLLAAITITAITLMSYAAMSGVIGGGGLGDLAIRYGYQR 198 AMGA RQII+ ALLPEA PG++AAIT+TAITL+SY AM+GV+G GGLGDLAIR+GYQR Sbjct: 132 QAMGASTRQIIWNALLPEARPGIIAAITVTAITLVSYTAMAGVVGAGGLGDLAIRFGYQR 191 Query: 199 FQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 232 FQT+VMVVTV +L++LVQ+LQ GD+LV+ F+RK Sbjct: 192 FQTDVMVVTVVMLLILVQILQTVGDKLVVHFSRK 225 >CC2668 [P] COG2011 ABC-type metal ion transport system, permease component Ccr Caulobacter vibrioides Length = 224 Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 142/214 (66%), Positives = 180/214 (84%) Query: 19 IDWSEVGDATLETLAMTGGSLLFTVLLGLPLGILLFLTNRGQLLEQRGLYWVLSLVVNVL 78 +DW E+G ATL+TLAM GGS++ TV GLPLG++LFLT +GQ+LE R LSL+VN+L Sbjct: 11 VDWREIGQATLDTLAMLGGSMVLTVAGGLPLGVILFLTGKGQMLENRLANGALSLLVNIL 70 Query: 79 RSVPFLILLILLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDCGILEAC 138 RSVPF+ILLI++IP T+ LVGTSLGV GAIPPLV G APFFARL E+ LRE+D G++EA Sbjct: 71 RSVPFVILLIVMIPLTVALVGTSLGVAGAIPPLVAGAAPFFARLVETALREVDKGVIEAS 130 Query: 139 TAMGARRRQIIFGALLPEALPGLLAAITITAITLMSYAAMSGVIGGGGLGDLAIRYGYQR 198 AMGA+RRQ++ GALLPEALPGL+AA T+TA+ L+SY AM+GV+G GGLGDLAIR+GYQR Sbjct: 131 FAMGAKRRQVVLGALLPEALPGLVAAATVTAVALVSYTAMAGVVGAGGLGDLAIRFGYQR 190 Query: 199 FQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 232 FQT+VMVVTV +++VLVQ+LQ GD +V + +R+ Sbjct: 191 FQTDVMVVTVVLMLVLVQVLQMIGDAVVRKVSRR 224 >XF0874 [P] COG2011 ABC-type metal ion transport system, permease component Xfa Xylella fastidiosa 9a5c Length = 235 Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 121/219 (55%), Positives = 159/219 (72%) Query: 14 IDLSVIDWSEVGDATLETLAMTGGSLLFTVLLGLPLGILLFLTNRGQLLEQRGLYWVLSL 73 ++L V W ++G ATL+TL M GG+L + LGLPLGI L+L N QL +Y +L+L Sbjct: 17 VNLDVDKWKDIGRATLDTLFMVGGALPPALALGLPLGIALYLCNTSQLRSHPLVYTLLAL 76 Query: 74 VVNVLRSVPFLILLILLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDCG 133 VN+LRSVPF+IL+I +IP TL ++GTSLG+ GAI PLVIG APF+ARL ES LRE+D G Sbjct: 77 AVNLLRSVPFIILMITMIPVTLLIMGTSLGIRGAILPLVIGAAPFYARLVESALREVDRG 136 Query: 134 ILEACTAMGARRRQIIFGALLPEALPGLLAAITITAITLMSYAAMSGVIGGGGLGDLAIR 193 ++EA AMGA Q+I+ LLPEA PGL+A TIT I ++ + AM G IG GGLGD+A R Sbjct: 137 VVEAAQAMGATTWQLIWRVLLPEARPGLIAGATITGIAVVGFTAMGGAIGSGGLGDVAYR 196 Query: 194 YGYQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 232 GY R T+V +VTV L+++VQL+Q FGD LV ++R+ Sbjct: 197 EGYLRSHTDVALVTVIALLMVVQLIQMFGDWLVAHYSRR 235 >BH3480 [P] COG2011 ABC-type metal ion transport system, permease component Bha Bacillus halodurans Length = 218 Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 97/208 (46%), Positives = 142/208 (68%) Query: 16 LSVIDWSEVGDATLETLAMTGGSLLFTVLLGLPLGILLFLTNRGQLLEQRGLYWVLSLVV 75 L W + +AT ET+ MT S++ T ++G+ LG++LFLT++G + + ++ V S +V Sbjct: 2 LENFKWDALWEATKETIYMTSVSVVATFVIGIILGLILFLTSKGNMWQNVAIHTVFSAIV 61 Query: 76 NVLRSVPFLILLILLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDCGIL 135 N+ RS+PF+IL++LLIPFT L G+ LG A+P L+IG APF+AR+ E LREID G++ Sbjct: 62 NIFRSIPFIILIVLLIPFTRALFGSMLGANAALPALIIGAAPFYARMVEIALREIDKGVI 121 Query: 136 EACTAMGARRRQIIFGALLPEALPGLLAAITITAITLMSYAAMSGVIGGGGLGDLAIRYG 195 EA AMGA +II L+PE+ P L++ IT+TAI L+SY AM+GVIG GGLG A G Sbjct: 122 EAAQAMGAGHFRIICRVLIPESFPALISGITVTAIALVSYTAMAGVIGAGGLGHFAFLEG 181 Query: 196 YQRFQTEVMVVTVAILVVLVQLLQFFGD 223 +QR E+ +V ++ LV ++Q+ GD Sbjct: 182 FQRNNPEITLVATITILFLVFIIQWIGD 209 >FN0659 [P] COG2011 ABC-type metal ion transport system, permease component Fnu Fusobacterium nucleatum Length = 233 Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 93/206 (45%), Positives = 142/206 (68%) Query: 27 ATLETLAMTGGSLLFTVLLGLPLGILLFLTNRGQLLEQRGLYWVLSLVVNVLRSVPFLIL 86 +T+ET+ M S +F++LLG P+G+LL +T + E + +L +++N LRS PF+IL Sbjct: 25 STVETIYMVFLSTIFSLLLGFPIGVLLVITKEDGIYEMKKFNAILGVIINALRSFPFIIL 84 Query: 87 LILLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDCGILEACTAMGARRR 146 +ILL P + ++VG+++G T AI PL IG APF AR+ E L E+D G++EA +MGA Sbjct: 85 MILLFPLSRFVVGSTIGATAAIVPLSIGAAPFVARIVEGALLEVDYGLIEASQSMGASNS 144 Query: 147 QIIFGALLPEALPGLLAAITITAITLMSYAAMSGVIGGGGLGDLAIRYGYQRFQTEVMVV 206 IIF +LPE L+ I +T I+L+ Y+AM+G IG GGLGDLAIR+GY RF+ ++M+ Sbjct: 145 TIIFKVMLPECYSTLVHGIIVTIISLIGYSAMAGTIGAGGLGDLAIRFGYLRFKLDIMIY 204 Query: 207 TVAILVVLVQLLQFFGDRLVLRFTRK 232 + I+++LVQ++Q G+ +V R +K Sbjct: 205 AIIIIIILVQVIQSVGNYIVYRRQKK 230