BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1426.p         (98 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGl12 Non COG                                                         103   9e-23
lin0741 Non COG                                                        30   1.8  
BS_guaA_1 [F] COG0518 GMP synthase - Glutamine amidotransferase ...    29   2.1  
AGc699 [S] COG4782 Uncharacterized protein conserved in bacteria...    28   4.1  
VC2731 [NU] COG1459 Type II secretory pathway, component PulF Vc...    27   9.0  

>AGl12 Non COG
          Length = 96

 Score =  103 bits (257), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 68/96 (70%)

Query: 1  MTYDEFRRQLGKAGLTVKGFADLIKQSPNSISNHAKHGEVPPHLAIIAALMGDMAESGMD 60
          M Y+ F R L +AGL+++ FA+LI  +PNS+SN+A+ G VP HLAIIAAL+ +M   G+D
Sbjct: 1  MGYEGFLRDLARAGLSIRAFAELIGMNPNSVSNYARSGGVPDHLAIIAALVAEMGTQGVD 60

Query: 61 YRATLNRIQFEANKPRGGATKGRFGGSKQINLQLSQ 96
          +R  +++++    KPRG A  G+FGG +Q+ L L +
Sbjct: 61 FRGVISKVELTVKKPRGRAKPGQFGGDRQVPLDLDR 96


>lin0741 Non COG
          Length = 629

 Score = 29.6 bits (65), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 4   DEFRRQLG--KAGLTVKGFADLIKQSPNSISNHAKHGEVPPHLAIIAAL 50
           +E  RQL   K G+ +  F DL K    S+SN +  GEVPP +  + +L
Sbjct: 61  NEVNRQLAPKKVGVDLT-FEDLAKIKTISLSNRSLTGEVPPEIKNLVSL 108


>BS_guaA_1 [F] COG0518 GMP synthase - Glutamine amidotransferase domain Bsu
           Bacillus subtilis
          Length = 198

 Score = 29.3 bits (64), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 7   RRQLGKAGLTVKGFADLIKQSPNSISNHAKHG----EVPPHLAIIAALMGDMAESGM 59
           +R+ GKA + ++G  DL +  PN       HG    EVP    + AA       S M
Sbjct: 104 QREYGKANIRIEGTPDLFRDLPNEQVVWMSHGDLVVEVPEGFTVDAATSHHCPNSAM 160


>AGc699 [S] COG4782 Uncharacterized protein conserved in bacteria Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 441

 Score = 28.5 bits (62), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 7/57 (12%)

Query: 2   TYDEFRRQLGKAGLTVKGFADLIKQSPNSISNHAKHGEVPPHLAIIAALMGDMAESG 58
           + + +R QL KAG+TV    DL K       NH K  E P     +  L+GD   +G
Sbjct: 292 SVEPYRSQLEKAGITV---LDLTKLQSGDRLNHGKFAESPE----VVRLIGDRLIAG 341


>VC2731 [NU] COG1459 Type II secretory pathway, component PulF Vch Vibrio
           cholerae
          Length = 406

 Score = 27.3 bits (59), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 36  KHGEVPPHLAIIAALMGDMAESGMDYRATLNRIQFEANKPR 76
           K G   P LA+I   +  + +SGM     L  +  ++ KPR
Sbjct: 60  KRGISTPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPR 100