BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1375.p (1340 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2383 [S] COG2911 Uncharacterized protein conserved in bacteri... 1001 0.0 NMA0295 [S] COG2911 Uncharacterized protein conserved in bacteri... 187 1e-46 NMB2135 [S] COG2911 Uncharacterized protein conserved in bacteri... 187 1e-46 PA2542 [S] COG2911 Uncharacterized protein conserved in bacteria... 117 2e-25 XF1232 [S] COG2911 Uncharacterized protein conserved in bacteria... 103 2e-21 >RSc2383 [S] COG2911 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 1299 Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust. Identities = 575/1339 (42%), Positives = 817/1339 (61%), Gaps = 59/1339 (4%) Query: 13 PAQP--PQRPAR-HGRRLAAWSGGTLAVLVLAAA---GVALYATHTESGARLLWNGAVKA 66 P +P P P R GRRL W+G +A ++LA A G ++A + +G LW+ A + Sbjct: 8 PTRPDAPIPPGRGWGRRLLRWAGLLVAFVLLAVAALCGWLVWALQSPTGTAQLWSLATRF 67 Query: 67 LGGKLSGQLLGGTVADGLRLRALHYQDDKRILDIDRIDARWHLALLRRSLRLDYLRVGQV 126 +SG+L GGT+ DGL LR LH + + ID ++ RW + R YL G V Sbjct: 68 GHAHVSGRLAGGTLRDGLSLRDLHVRAGGTEVRIDHVEGRWAITRGPWHARFAYLSAGNV 127 Query: 127 QLNQQPS-PSEPSTLPASLEIPLALEIGEISLERLNLTQGTSSTELSRLKLHGNSDGVQH 185 + P+ P+ PS LPASL +PLAL++ ++++RL + QGTS+TEL L ++DG H Sbjct: 128 DVTLHPTAPTPPSGLPASLTLPLALDVDRLAVDRLAIRQGTSTTELKALAGSLHTDGSHH 187 Query: 186 TLVLDSLTTPYGDATALLHLNGKRPFAIGGGLELTGAYQHGQLKEQYQLAAQLSGSLQEL 245 ++LDS+ TP G A L + G RP+ + G L ++ G + + ++AQLSGSL+ L Sbjct: 188 NVLLDSVDTPAGRLAATLRMAGTRPYPLTGAATLAAQFEAGGQRREASVSAQLSGSLEAL 247 Query: 246 GIALTAGGDRLKGSADILATPLASVPLKRAKIDLQHINPQAFNAAAPAADLHLRADLAPP 305 I G L A I ATP ++P RA + + +NP+AF AP A L + ADL P Sbjct: 248 RIDAIGTGAGLTAQARIDATPFGALPFTRAVVSAEQVNPRAFAPGAPEAALSVHADLRPD 307 Query: 306 AGLTADAPLQVSGRIDIDNAHPGRLDEQRLPLLSASADLKLDLQQQTLSRLDIRLLRDAR 365 A T L V+G + IDNA G LD QRLPL S A ++L Q L+ LD+RL A+ Sbjct: 308 AQATT---LTVAGPVRIDNAQAGPLDWQRLPLQSLRAQVRLTEAAQQLTGLDVRLPGGAQ 364 Query: 366 IEGSGQFRPGSNEPGKQEPLSGQFKLRVSDLDLSQLHRQVRPTRLSGPVDLSLAPEAQQI 425 + GS R G G + V LDL LH + TRL+GPV + Q + Sbjct: 365 VTGSADVRNGR----------GTLRAEVRQLDLQALHGALEKTRLAGPVTVDFEGGTQHV 414 Query: 426 LLTLQDSALKLHVDSMIGHDRVQVRQASLTAGKSRLETTGTLQTTGAMDYELKGRLLDFD 485 L L ++ +++ ++ V A L+ G+SRL +GTL+ A + KG L +FD Sbjct: 415 RLDLAGGDMRAQATAVLDAAQIAVDSAQLSLGRSRLSLSGTLKHDEAQSFAFKGNLAEFD 474 Query: 486 PSAVLQAVAPPAAPARKGRKSSAPVSKPIAARINMDFDAAGALSPELRLKLGFAIHDSSY 545 PS + +K RIN FD G L+ + + FA+ DS Y Sbjct: 475 PSRL---------------------AKVARGRINATFDTHGTLAEPIDAAIRFAVRDSEY 513 Query: 546 GELPMSGRGDLNLVAMRLLPSRAHLQIAGNTLDLDGSFGAPSDKLKLKIDAPQLAKLGYG 605 LPM+G G+L+L RLLPS A L +AGN L GSFGA D++ + IDAPQLA+L G Sbjct: 514 AGLPMTGDGNLHLRGPRLLPSDARLDVAGNRASLRGSFGAAGDRMHVDIDAPQLARLRLG 573 Query: 606 LSGLLRVDGILAGTRQRPNLLASFQAEQLSFGAHKLHHLAGQSELHSNLAAGVASPDNRL 665 + G L + G ++GT +RP + A+F+A+QL++G +++ +G+++L L D L Sbjct: 574 VGGALSLSGDVSGTLKRPQVEATFRAQQLAYGGNRIDAASGRAQLRDGL-------DGPL 626 Query: 666 ALNVEGDGYSGPQAELAHLAIKLDGTYAKHALSLQAKGKLLDQSLDLNLAAHGQLTEKTR 725 + S P L + LDGT H A G + Q LA G LT Sbjct: 627 QFELTAQRVSAPNVLLREVRATLDGTRRAHRFRADADGSVRSQPFTFALAGDGALTPGKD 686 Query: 726 GHYGWAGSLDQFSNQGLPRIAMASPLALEASADGIEAGSTRIEIDRTALELKRLSYHQGR 785 G WAG+L S +G P + + +P+ + + + G + +D+T + ++R+ QG Sbjct: 687 GD-AWAGTLSTLSARGAPDLQLTAPVRVSVAPGRLAVGRADLTLDQTPIRIERVESDQGH 745 Query: 786 LASAGQVKALDVGRILELVQQLTGTPPPVKTDLVLDSDWDFTLAETASGYLQIARKSGDV 845 L SAG+V L + R+LELV+ TG PPV+TDLV+D WD L TA+G +IAR+SGD+ Sbjct: 746 LRSAGRVDGLAIARVLELVRIWTGQAPPVRTDLVIDGQWDLDLGGTATGTARIARRSGDL 805 Query: 846 RVTTSTGEATLGLSELQLRSQFQGEQMRVSGRVNAARVGTLELDGEIGLQR--VDQVLAL 903 + G LGL+E + ++ +G ++ + G V + RVG + LD IGL R V LAL Sbjct: 806 SINAGRGFTPLGLTEAVVEARGEGMRLGLHGDVQSTRVGRIHLDAGIGLAREAVPGALAL 865 Query: 904 -DAASPLNLSAKLDIPQVKRMGDLIGPQVNLDGKLAANLNAAGTLEQPKLSGAINGDNLA 962 ASPL+ + +D+P++K +GDL+GP V LDG+LAANL AGT+ PK+SG ++G + Sbjct: 866 MSPASPLSGTLTVDLPRLKAVGDLLGPDVALDGRLAANLTFAGTVGAPKVSGLLDGQGID 925 Query: 963 VTEFDQGIQLKDGIVRIVMDSNVIDLRQIEFHGGSGTLRAGGKIQLGADNPDLNASLTAD 1022 V +DQGI+L DG V + +D NV+DL+++ FHGG GTLRA G++QLG NP+L +L AD Sbjct: 926 VALYDQGIRLTDGTVHVGLDQNVVDLKEVVFHGGDGTLRAQGRVQLGEANPNLAGTLVAD 985 Query: 1023 HLELFASPDRRLMLSGEGKISNVNEQLRVDGKFTVDRALFDLPKSSAPKLGDDVVIISRS 1082 L+LFA PDR L+LSG+ +I+N ++++ + GKF +DR LF+LPK AP LGDDVVI+ R+ Sbjct: 986 RLQLFADPDRTLVLSGQARIANESDRVAITGKFRIDRGLFNLPKDGAPSLGDDVVIVRRA 1045 Query: 1083 GKNRVGAAASSQQKLEAATEKPASKFAPIINLAIDLGNDFRFRGSGADLLLRGDMNVRSE 1142 R A + ++ EKPA +F+P++++ +D G+ FRF+G+GADL L G M+V SE Sbjct: 1046 DAARNRAERGTSRE-----EKPAGRFSPVVDVDVDFGDHFRFKGAGADLALGGQMHVHSE 1100 Query: 1143 PLSPLRATGTINVAEGS-YEAFGTKLNIERGIINFTGPLSNPNLNILAMRRNQDVDAGVS 1201 PL PLR TG+I V +GS YEAFG KL IE+GI+NFTGP++NP+LNILAMRRNQ+V+AGV Sbjct: 1101 PLVPLRGTGSIYVRQGSTYEAFGRKLAIEQGILNFTGPINNPSLNILAMRRNQEVEAGVQ 1160 Query: 1202 VTGNVNQPRVQLVSEPNVPDDEKLSWMMFGHGSDSSNIGQRTA-SSQALALVGNMAGKRI 1260 VTG V QPRV+LVSEP+V D++KLSW+MFG+ + ++ +GQ+ A S AL L+GN+AGK + Sbjct: 1161 VTGTVRQPRVKLVSEPSVADEDKLSWLMFGYSASNAGLGQQQAMSGAALGLLGNVAGKNV 1220 Query: 1261 TKDIGLDQFSIGSSDSGLTDDQVVNLGKAITQKITLGYEQSLQGAASIAKATWQISRRWS 1320 + GLD+FSIG S SGLTD QVV++GKAI+++I +GYEQSL A SI K TWQ+SRRWS Sbjct: 1221 ARRFGLDEFSIGPSTSGLTDPQVVSVGKAISERIAVGYEQSLSTADSIVKLTWQLSRRWS 1280 Query: 1321 VVARAGTVNGLNILFSQRY 1339 VVAR GT+NG +ILF++R+ Sbjct: 1281 VVARGGTINGASILFNKRF 1299 >NMA0295 [S] COG2911 Uncharacterized protein conserved in bacteria NmA Neisseria meningitidis Z2491 Length = 1371 Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 143/471 (30%), Positives = 231/471 (49%), Gaps = 30/471 (6%) Query: 878 VNAARVGTLELDGEIGLQRVDQVLALDAASPLNLSAKLDIPQVKRMGDLIGPQVNLDGKL 937 VNAA G+ G V Q + D A PL L + + + + + G L Sbjct: 906 VNAAVNGSSNYGKINGNITVGQSRSFDTA-PLGGRLNLTVADAEVFRNFLPVGQTVKGSL 964 Query: 938 AANLNAAGTLEQPKLSGAINGDNLAVTEFDQGIQLKDGIVR--IVMDSNVIDLRQIEFHG 995 A + G++ P L G+INGD L QGI L +G +R I VID + G Sbjct: 965 NAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRKWVIDSLKFRHEG 1024 Query: 996 GSGTLRAGGKIQLGADNPDLNASLTADHLELFASPDRRLMLSGEGKISNVNEQ-LRVDGK 1054 T G + + PD++ D + + P+RRL +SG ++ ++ + V G Sbjct: 1025 ---TAELSGTVGMENSGPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRYSPQKGISVTGM 1081 Query: 1055 FTVDRALFDLPKSSAPKLGDDVVIISRSGKNRVGAAASSQQKLEAATEKPASKFAPIINL 1114 D+ LF KSS P +GDDVV++ + K EAA P + +NL Sbjct: 1082 IKTDQGLFGSQKSSMPSVGDDVVVLG-------------EVKKEAAAPLPVN-----MNL 1123 Query: 1115 AIDLGNDFRFRGSGADLLLRGDMNVRSEPLSPLRATGTINVAEGSYEAFGTKLNIERGII 1174 +DL + RF G GAD+ + G + + ++ +R GT+ V +G Y+A+G L+I +G + Sbjct: 1124 TLDLNDGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTV 1183 Query: 1175 NFTGPLSNPNLNILAMRRNQDVDAGVSVTGNVNQPRVQLVSEPNVPDDEKLSWMMFGHGS 1234 +F GPL++PNLNI A RR V AGV + G++N PR+ L + + + +KLSW++ Sbjct: 1184 SFVGPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAG 1243 Query: 1235 DSSNIGQRTASSQALALVGNMAGKRI--TKDIGLDQFSIGSSDSGLTD--DQVVNLGKAI 1290 S+ S+ A AL+ RI D+G ++ +G + +QV+ +GK + Sbjct: 1244 SGSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQL 1303 Query: 1291 TQKITLGYEQSLQGAASIAKATWQISRRWSVVARAGT-VNGLNILFSQRYD 1340 T K+ +GYE S+ A K ++++R VAR G+ +G + ++ R+D Sbjct: 1304 TGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFD 1354 Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 243/985 (24%), Positives = 402/985 (40%), Gaps = 112/985 (11%) Query: 12 PPAQPPQRPARHGRRLAAWSGGTLAVLVLAAAGVALYATHTESGARLLWNGAVKALGGKL 71 P P PA+ R L S L+VL+LA + A TE+G R G + Sbjct: 2 PSEHRPTPPAKKRRPLLKLSAALLSVLILAVCFLGWLA-GTEAGLRFGLYQIPSWFGVNI 60 Query: 72 SGQLLGGTVADGLRLRALHYQDDKRILDIDRIDARWHLA-LLRRSLRLDYLRVGQVQLNQ 130 S Q L GT+ DG + + L I R W + L+RRSL + + G + + Sbjct: 61 SSQNLKGTLLDGFDGDNWSIETEGADLKISRFRFAWKPSELMRRSLHITEISAGDIAIVT 120 Query: 131 QPSPSE----PSTLPASLEIPLA-----LEIGEISLERLNLTQGTSSTELSRLKLHGNSD 181 +P+P + P +LP S+++P A E G+IS+ + Q + L RL D Sbjct: 121 KPTPPKEERPPLSLPDSIDLPAAVYLDRFETGKISMGKAFDKQ---TVYLERLDASYRYD 177 Query: 182 GVQHTLVLDSLTTPYGDATALLHLNGKRPFAIGGGLELTGAYQHGQLK-EQYQLAAQLSG 240 H L L + TP+ ++ + K+PFA+ T Y G L+ + A+LSG Sbjct: 178 RKGHRLDLKAADTPWSSSSGSASVGLKKPFALD-----TAIYTKGGLEGKTIHSTARLSG 232 Query: 241 SLQELGIALTAGGDRLKGSADILATPLASV---PLKRAKIDLQHINPQAFNAAAPAADLH 297 SL+++ L G ++ S + P A L+ + +INP AF + P A L+ Sbjct: 233 SLKDVRAELAIDGGNIRLSGKSVIHPFAESLDKTLEEVLVKGFNINPSAFVPSLPDAGLN 292 Query: 298 LRADLAPPAGLTADAPLQVSGRIDIDNAHPGRLDEQRLPLLSASADLKLDLQQQT--LSR 355 P + + + G +D++N G D +P+ + Q T + Sbjct: 293 FDLTAIP----SFSDGIALEGSLDLENTKAGFADRNGIPVRQVLGSFVIR-QDGTVHIGN 347 Query: 356 LDIRLLRDARIEGSGQ---------FRPGSNEPGKQEPLSGQFKLRVSDLDLSQLHRQVR 406 + LL I SG+ G N G ++ L FK Sbjct: 348 TSVALLGRGGIRLSGKIDTEKDILDLNIGINSVGAEDVLQTAFK---------------- 391 Query: 407 PTRLSGPVDLSLAPEAQQILLTL------QDSALKLHVDSMIGHDRVQVRQASLTAGKSR 460 RL G + + + +I L D +L + D G ++ + ++ AG+ Sbjct: 392 -GRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPANGQRKLVLDTVNIAAGQGS 450 Query: 461 LETTGTLQTTGAMDYELKGRLLDFDPSAVLQAVAPPAAPARKGRKSSAPVSKPIAARINM 520 L G L+ +L R FDPS + P PA IN Sbjct: 451 LTAQGYLELFKDRLLKLDIRSRAFDPSRI-----DPQLPA---------------GNING 490 Query: 521 DFDAAGALSPELRLKLGFAIHDSSYGELPMSGRGDLNLVAMRLLPSRAHLQIAGNTLDLD 580 + AG L+ E + ++ +P++G D+ + L + L++ N + D Sbjct: 491 SINLAGELAKE-KFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKTD 549 Query: 581 GSFGAPSDKLKLKIDAPQLAKLGYGLSGLLRVDGILAGTRQRPNLLASFQAEQLSFGAHK 640 G FG D+L L I AP L++ G+GL+G L V G L+G + +F+ + LS A Sbjct: 550 GGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLD--GGIRTFETD-LSGAARN 606 Query: 641 LHHLAGQSELHSNLAAGVASPDNRLALNVEGDG----YSGPQAELAHLAIKLDGTYAKHA 696 L H+ +++ S SPD + + G SG + + LDGT +H Sbjct: 607 L-HIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLSLSGGAEVVDTADLMLDGTGVQHR 665 Query: 697 LSLQAKGKLLDQSLDLNLAAHGQLT-EKTRGHYGWAGSLDQFSNQGLPRIAMASPLALEA 755 + A L + +L A G + E TR W GS+ G + + + + LEA Sbjct: 666 IRTHAAMTLDGKPFKFDLDASGGINRELTR----WKGSIGILDIGGAFNLKLQNRMTLEA 721 Query: 756 SADGIEAGSTRIEIDRTALELKRLSYHQGR-LASAGQVKALDVGRILELVQQLTGTPPPV 814 A+ + A + + +L L+ S+ + +++ G L + + + PP Sbjct: 722 GAERVAASAANWQAMGGSLNLQHFSWDKKTGISAKGGAHGLHIAELHNFFK------PPF 775 Query: 815 KTDLVLDSDWDFTLAETASGYLQIARKSGDVRVTTSTGEATLGLSELQLRSQFQGEQMRV 874 + +LVL+ DWD A GYL I+R+SGD + G LGL+ L+++FQ +++ + Sbjct: 776 EHNLVLNGDWDVAYGRNARGYLNISRQSGDAVL---PGGQALGLNAFSLKTRFQNDRIGI 832 Query: 875 SGRVNAARVGTLELDGEIGLQRVDQVLALDAASPLNLSAKLDIPQVKRMGDLI-GPQVNL 933 AR G + D +IG + A +PL +P + + + N+ Sbjct: 833 L-LDGGARFGRINADLDIG----NAFGGNMANAPLGGRITASLPDLGTLKPFLPAAAQNI 887 Query: 934 DGKLAANLNAAGTLEQPKLSGAING 958 G L A G + P ++ A+NG Sbjct: 888 TGSLNAAAQIGGRVGSPSVNAAVNG 912 >NMB2135 [S] COG2911 Uncharacterized protein conserved in bacteria Nme Neisseria meningitidis MC58 Length = 1405 Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 143/471 (30%), Positives = 231/471 (49%), Gaps = 30/471 (6%) Query: 878 VNAARVGTLELDGEIGLQRVDQVLALDAASPLNLSAKLDIPQVKRMGDLIGPQVNLDGKL 937 VNAA G+ G V Q + D A PL L + + + + + G L Sbjct: 940 VNAAVNGSSNYGKINGNITVGQSRSFDTA-PLGGRLNLTVADAEVFRNFLPVGQTVKGSL 998 Query: 938 AANLNAAGTLEQPKLSGAINGDNLAVTEFDQGIQLKDGIVR--IVMDSNVIDLRQIEFHG 995 A + G++ P L G+INGD L QGI L +G +R I VID + G Sbjct: 999 NAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRKWVIDSLKFRHEG 1058 Query: 996 GSGTLRAGGKIQLGADNPDLNASLTADHLELFASPDRRLMLSGEGKISNVNEQ-LRVDGK 1054 T G + + PD++ D + + P+RRL +SG ++ ++ + V G Sbjct: 1059 ---TAELSGTVGMENSGPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRYSPQKGISVTGM 1115 Query: 1055 FTVDRALFDLPKSSAPKLGDDVVIISRSGKNRVGAAASSQQKLEAATEKPASKFAPIINL 1114 D+ LF KSS P +GDDVV++ + K EAA P + +NL Sbjct: 1116 IKTDQGLFGSQKSSMPSVGDDVVVLG-------------EVKKEAAAPLPVN-----MNL 1157 Query: 1115 AIDLGNDFRFRGSGADLLLRGDMNVRSEPLSPLRATGTINVAEGSYEAFGTKLNIERGII 1174 +DL + RF G GAD+ + G + + ++ +R GT+ V +G Y+A+G L+I +G + Sbjct: 1158 TLDLNDGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTV 1217 Query: 1175 NFTGPLSNPNLNILAMRRNQDVDAGVSVTGNVNQPRVQLVSEPNVPDDEKLSWMMFGHGS 1234 +F GPL++PNLNI A RR V AGV + G++N PR+ L + + + +KLSW++ Sbjct: 1218 SFVGPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAG 1277 Query: 1235 DSSNIGQRTASSQALALVGNMAGKRI--TKDIGLDQFSIGSSDSGLTD--DQVVNLGKAI 1290 S+ S+ A AL+ RI D+G ++ +G + +QV+ +GK + Sbjct: 1278 SGSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQL 1337 Query: 1291 TQKITLGYEQSLQGAASIAKATWQISRRWSVVARAGT-VNGLNILFSQRYD 1340 T K+ +GYE S+ A K ++++R VAR G+ +G + ++ R+D Sbjct: 1338 TGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFD 1388 Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 247/1002 (24%), Positives = 405/1002 (40%), Gaps = 125/1002 (12%) Query: 2 SDPQQE-LQASPPAQPPQRPARHGRRLAAWSGGTLAVLVLAAAGVALYATHTESGARLLW 60 +DP + + P P PA+ R L S L+VL+LA + A TE+G R Sbjct: 25 TDPTENGTRKMPSEHRPTPPAKKRRPLLKLSAALLSVLILAVCFLGWLA-GTEAGLRFGL 83 Query: 61 NGAVKALGGKLSGQLLGGTVADGLRLRALHYQDDKRILDIDRIDARWHLA-LLRRSLRLD 119 G +S Q L GT+ DG + + L I R W + L+RRSL + Sbjct: 84 YQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEGADLKISRFRFAWKPSELMRRSLHIT 143 Query: 120 YLRVGQVQLNQQPSPSE----PSTLPASLEIPLA-----LEIGEISLERLNLTQGTSSTE 170 + G + + +P+P + P +LP S+++P A E G+IS+ + Q + Sbjct: 144 EISAGDIAIVTKPTPPKEERPPLSLPDSIDLPAAVYLDRFETGKISMGKAFDKQ---TVY 200 Query: 171 LSRLKLHGNSDGVQHTLVLDSLTTPYGDATALLHLNGKRPFAIGGGLELTGAYQHGQLK- 229 L RL D H L L + TP+ ++ + K+PFA+ T Y G L+ Sbjct: 201 LERLDASYRYDRKGHRLDLKAADTPWSSSSGAASVGLKKPFALD-----TAIYTKGGLEG 255 Query: 230 EQYQLAAQLSGSLQELGIALTAGGDRLKGSADILATPLASV---PLKRAKIDLQHINPQA 286 + A+LSGSL+++ L G ++ S + P A L+ + +INP A Sbjct: 256 KTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHPFAESLDKTLEEVLVKGFNINPAA 315 Query: 287 FNAAAPAADLHLRADLAPPAGLTADAPLQVSGRIDIDNAHPGRLDEQRLPLLSASADLKL 346 F + P A L+ P + + + G +D++N G D +P+ + Sbjct: 316 FVPSLPDAGLNFDLTAIP----SFSDGIALEGSLDLENTKAGFADRNGIPVRQVLGGFVI 371 Query: 347 ---------DLQQQTLSRLDIRLLRDARIEGSG-QFRPGSNEPGKQEPLSGQFKLRVSDL 396 + L R IRL E G N G ++ L FK Sbjct: 372 RQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLNIGINSVGAEDVLQTAFK------ 425 Query: 397 DLSQLHRQVRPTRLSGPVDLSLAPEAQQILLTL------QDSALKLHVDSMIGHDRVQVR 450 RL G + + + +I L D +L + D G ++ + Sbjct: 426 -----------GRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPANGQRKLVLD 474 Query: 451 QASLTAGKSRLETTGTLQTTGAMDYELKGRLLDFDPSAVLQAVAPPAAPARKGRKSSAPV 510 ++ AG+ L G L+ +L R FDPS + P PA Sbjct: 475 TVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRI-----DPQLPA---------- 519 Query: 511 SKPIAARINMDFDAAGALSPELRLKLGFAIHDSSYGELPMSGRGDLNLVAMRLLPSRAHL 570 IN + AG L+ E + ++ +P++G D+ + L + L Sbjct: 520 -----GNINGSINLAGELAKE-KFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDL 573 Query: 571 QIAGNTLDLDGSFGAPSDKLKLKIDAPQLAKLGYGLSGLLRVDGILAGTRQRPNLLASFQ 630 ++ N + DG FG D+L L I AP L++ G+GL+G L V G L+G + +F+ Sbjct: 574 RLGRNIIKTDGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLD--GGIRTFE 631 Query: 631 AEQLSFGAHKLHHLAGQSELHSNLAAGVASPDNRLALNVEGDG----YSGPQAELAHLAI 686 + LS A L H+ +++ S SPD + + G SG A + + Sbjct: 632 TD-LSGAARNL-HIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADL 689 Query: 687 KLDGTYAKHALSLQAKGKLLDQSLDLNLAAHGQLT-EKTRGHYGWAGSLDQFSNQGLPRI 745 LDGT +H + A L + +L A G + E TR W GS+ G + Sbjct: 690 MLDGTGVQHRIRTHAAMTLDGKPFKFDLDASGGINRELTR----WKGSIGILDIGGAFNL 745 Query: 746 AMASPLALEASADGIEAGSTRIEIDRTALELKRLSYHQGR-LASAGQVKALDVGRILELV 804 + + + LEA A+ + A + + +L L+ S+ + +++ G L + + Sbjct: 746 KLQNRMTLEAGAERVAASAANWQAMGGSLNLQHFSWDKKTGISAKGGAHGLHIAELHNFF 805 Query: 805 QQLTGTPPPVKTDLVLDSDWDFTLAETASGYLQIARKSGDVRVTTSTGEATLGLSELQLR 864 + PP + +LVL+ DWD A GYL I+R+SGD + G LGL+ L+ Sbjct: 806 K------PPFEHNLVLNGDWDVAYGRNARGYLNISRQSGDAVL---PGGQALGLNAFSLK 856 Query: 865 SQFQGEQMRVSGRVNAARVGTLELDGEIGLQRVDQVLALD-------AASPLNLSAKLDI 917 ++FQ + R+G L LDG R++ L + A +PL + Sbjct: 857 TRFQND-----------RIGIL-LDGGARFGRINADLGIANAFGGNMANAPLGGRITASL 904 Query: 918 PQVKRMGDLI-GPQVNLDGKLAANLNAAGTLEQPKLSGAING 958 P + + + N+ G L A G + P ++ A+NG Sbjct: 905 PDLGALKPFLPAAAQNITGSLNAAAQIGGRVGSPSVNAAVNG 946 >PA2542 [S] COG2911 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 1221 Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 152/560 (27%), Positives = 257/560 (45%), Gaps = 85/560 (15%) Query: 817 DLVLDS--DW---DFTLAETASGYLQIARKSGDVRVTTSTGEATL--GLSELQLRSQFQG 869 D LDS W DF +G LQ+ DV +G +L G L+LR Q Q Sbjct: 710 DFPLDSLKQWFPEDFAWQGKLNGDLQL-----DVPARGPSGVVSLDAGSGTLRLRDQGQW 764 Query: 870 -----EQMRVSGRVNAARVGT-LELDG-EIGLQRVD-QVLALDAASPLNLS---AKLDIP 918 + +R+ R+ RV T L+ G ++G RV Q+ A+ PL+ A LD+ Sbjct: 765 VDVGYDSLRLESRLAPNRVDTSLDFRGPKLGELRVQAQIDPRPASKPLSGEFSLAGLDL- 823 Query: 919 QVKRMGDLIGPQVNLDGKLAANLNAAGTLEQPKLSGAINGDNLAVTEFDQGI---QLKDG 975 L P V + KL LN +G L L+ ++G VT D I +L Sbjct: 824 ------SLARPFVPMVEKLQGRLNGSGRLSGGLLAPRVDG---RVTLSDGNIGGGELPTS 874 Query: 976 IVRIVMDSNVIDLRQIEFHGGSGTLRAG-----GKIQLGADNPDLNASLTADHLELFASP 1030 + +D+ + +E GG + R G G + G D ++ ++ + L + P Sbjct: 875 FENLSLDARIAG-ESLELGGGWRSGRYGQGSLSGNLSWG-DALNVALNIRGNRLPVVVDP 932 Query: 1031 DRRLMLSGEGKISNVNEQLRVDGKFTVDRA---LFDLPKSSAPKLGDDVVIISRSGKNRV 1087 +L + + KI ++L + GK V R + LP S+ K+ DD VI+ Sbjct: 933 YAQLEVEPDLKIGMAGQELAISGKVLVPRGDITIRQLPPSTV-KVSDDAVIV-------- 983 Query: 1088 GAAASSQQKLEAATEKPASKFAPI-INLAIDLGND-FRFRGSGADLLLRGDMNVRSEPLS 1145 +E+PA + + +++ +++G D F G G L G +++ Sbjct: 984 ------------GSEQPAQRPLKMKMDIDVEVGQDKLAFSGFGLSAELAGHLHIGDN--- 1028 Query: 1146 PLRATGTINVAEGSYEAFGTKLNIERGIINFTGPLSNPNLNILAMRRNQDVDAGVSVTGN 1205 L G +N+ +G Y A+G +L I R + F GP+ P L+I A+RR DV AG+ +TG+ Sbjct: 1029 -LDTRGELNLNKGRYRAYGQRLTIRRARLFFAGPIDQPYLDIEAIRRVDDVVAGLRLTGS 1087 Query: 1206 VNQPRVQLVSEPNVPDDEKLSWMMFGH----GSDSSNIGQRTASSQALALVGN--MAGKR 1259 QP + SEP + ++ LS+++ G G DS+ +G+ ++ AL L G+ + G+ Sbjct: 1088 AEQPTSAVFSEPAMSQEQALSYLVLGRPMSTGEDSNMLGE---AALALGLAGSAPLTGE- 1143 Query: 1260 ITKDIGLDQFSIGSSDSGLTDDQVVNLGKAITQKITLGYEQSLQGAASIAKATWQISRRW 1319 I K +G+ F + + +G VV G IT K++L Y + A+ +Q+++R Sbjct: 1144 IAKQLGIQDFQLDTEGTG-NSTSVVASGN-ITDKLSLRYGVGVFEPANTIALRYQLTKRL 1201 Query: 1320 SVVARAGTVNGLNILFSQRY 1339 + A +G + L++ F + + Sbjct: 1202 YLEAASGLASSLDLFFKRDF 1221 Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust. Identities = 90/305 (29%), Positives = 128/305 (41%), Gaps = 52/305 (17%) Query: 89 LHYQDDKRILDIDRIDARWHLALLRRSLRLDYLRVG--QVQLNQQPS----PSEPSTLPA 142 L + D L ++R + RW A L LRL RV +V L+ PS S P +LP Sbjct: 60 LSWAQDGTQLVVERPELRWSPACLA-GLRLCLQRVAAERVALDLPPSGDSADSGPISLP- 117 Query: 143 SLEIPLALEIGEISLERLNLTQGTSSTELSRLKLHGNSDGVQHTLVLDSLTT-PYGDATA 201 +L++PL++E+GE+++ L EL +L H +DG+ +DSLT +G A Sbjct: 118 TLKLPLSIELGEVAVGSFLLDGNQQVAEL-KLAAHWLADGLH----IDSLTARGFGLDLA 172 Query: 202 L---LHLNGKRPFAIGGGLELTGAYQHGQLKEQYQLAAQLSGSLQELGIALTAGG----- 253 L L +G P L L + ++LA Q+ G LQ+ ALT G Sbjct: 173 LQGRLQPSGDWPLQAEATLGLPAPE-----GKPWKLAVQVGGELQQ---ALTLKGRSSGY 224 Query: 254 --DRLKGSADILATPLASVPLKRAK--------IDLQHINPQAFNAAAPAADLHLRADLA 303 L+G LA L + L RA D +N +A+ +L A Sbjct: 225 LDGSLEGQLQALAENLPARLLIRADGFKGAAGLPDTLTLNAIQLDASGDLKSGYLIRGGA 284 Query: 304 PPAGLTADAPLQVSGRIDIDNA--HPGRLD---EQRLPLL-------SASADLKLDLQQQ 351 G L + GR+D A RLD EQRL L+ S +AD LD + Sbjct: 285 SLPGEGGAVALSLDGRVDAQGADIRQLRLDAGGEQRLELVGRLDWRESLAADATLDWKDF 344 Query: 352 TLSRL 356 RL Sbjct: 345 PWLRL 349 >XF1232 [S] COG2911 Uncharacterized protein conserved in bacteria Xfa Xylella fastidiosa 9a5c Length = 1179 Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 106/430 (24%), Positives = 189/430 (43%), Gaps = 26/430 (6%) Query: 904 DAASPLNLSAKLDIPQVKRMGDLIGPQVNLDGKLAANLNAAGTLEQPKLSGAINGDNLAV 963 D +PL +++ ++ + + N G + +++ GT P L G + Sbjct: 759 DPYAPLTGDLYMNMSRLYWLEMFVPDIGNPRGLIEGHVSLRGTRSGPLLGGEATLRDFTA 818 Query: 964 TEFDQGIQLKDGIVRIVMDSNVIDLRQIEFHGGSGTLRAGGKIQLGADNPDLNASLTADH 1023 G+ L G R + G GTL G + +N L ++ + Sbjct: 819 EYPSMGLNLSQGQGRFTAQPDGSARILASVRSGDGTLNIDGGLSWFGENNPLQLNIRGRN 878 Query: 1024 LELFASPDRRLMLSGEGKISNVNEQLRVDGKFTVDRALFDLPK-SSAPKLGDDVVIISRS 1082 + + + + R++ + + +N +++ G+ V A DL + + +DVV++ Sbjct: 879 VLAYNTSELRIVSDPDLRFGLINNTMQLQGEVAVSEADIDLERLDRGVSVSEDVVVLDPV 938 Query: 1083 GKNRVGAAASSQQKLEAATEKPASKFAPIINLAIDLGNDFRFRGSGADLLLRGDMNVRSE 1142 R + LE +NL I LG+ G G L G M +R+ Sbjct: 939 DPERTAVS-----PLE-------------MNLRIVLGDKVNMSGFGLKGGLSGQMQIRAR 980 Query: 1143 PLSPLRATGTINVAEGSYEAFGTKLNIERGIINFTGPL-SNPNLNILAMRRNQDVDAGVS 1201 P + A G ++V G Y+A+G L I RG + ++ + S+P +NI A RR D+ AG+ Sbjct: 981 PGHEMTANGGLDV-RGRYKAYGQDLTIIRGQLVWSNNIVSDPRVNIRAQRRIADITAGID 1039 Query: 1202 VTGNVNQPRVQLVSEPNVPDDEKLSWMMFGH--GSDSSNIGQRTASSQALALVGNMA-GK 1258 V+G PRVQ+ S+P + E LS+++ G G+ SS+ Q+ AS+ A G Sbjct: 1040 VSGRAQSPRVQVWSDPVMSQSEALSYLVLGRKLGTASSDENQQVASAAAALSAGGGLIAS 1099 Query: 1259 RITKDIGLDQFSIGSSDSGLTDDQVVNLGKAITQKITLGYEQSLQGAASIAKATWQISRR 1318 ++ +GLD I S S V+ GK ++ K+ +GY S+ G+ S+ + +SR Sbjct: 1100 QLGAKLGLDDAGI--SQSSTLGGSVLGFGKYLSPKLYVGYGVSMVGSGSVLTLKYLLSRG 1157 Query: 1319 WSVVARAGTV 1328 + + + TV Sbjct: 1158 FDLEVESSTV 1167