BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1355.p         (205 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dnaJ [O] COG0484 DnaJ-class molecular chaperone with C-terminal ...    31   1.7  
ZdnaJ [O] COG0484 DnaJ-class molecular chaperone with C-terminal...    31   1.7  
ECs0015 [O] COG0484 DnaJ-class molecular chaperone with C-termin...    31   1.7  
FN0504 [E] COG0531 Amino acid transporters Fnu Fusobacterium nuc...    30   2.9  
YPO0469 [O] COG0484 DnaJ-class molecular chaperone with C-termin...    30   3.8  

>dnaJ [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn
           finger domain Eco Escherichia coli K12
          Length = 376

 Score = 31.2 bits (69), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 10/65 (15%)

Query: 4   IQIQILIHP--SSKGNNVKPLYKTAATVTAVGAMLALGGCVSVPT--GPSVMAMPGKGKS 59
           +Q+Q+  HP    +GNN   LY     V    AM ALGG + VPT  G   + +PG+ ++
Sbjct: 246 VQVQVKQHPIFEREGNN---LY---CEVPINFAMAALGGEIEVPTLDGRVKLKVPGETQT 299

Query: 60  YEQFR 64
            + FR
Sbjct: 300 GKLFR 304


>ZdnaJ [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn
           finger domain EcZ Escherichia coli O157:H7 EDL933
          Length = 376

 Score = 31.2 bits (69), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 10/65 (15%)

Query: 4   IQIQILIHP--SSKGNNVKPLYKTAATVTAVGAMLALGGCVSVPT--GPSVMAMPGKGKS 59
           +Q+Q+  HP    +GNN   LY     V    AM ALGG + VPT  G   + +PG+ ++
Sbjct: 246 VQVQVKQHPIFEREGNN---LY---CEVPINFAMAALGGEIEVPTLDGRVKLKVPGETQT 299

Query: 60  YEQFR 64
            + FR
Sbjct: 300 GKLFR 304


>ECs0015 [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn
           finger domain Ecs Escherichia coli O157:H7
          Length = 376

 Score = 31.2 bits (69), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 10/65 (15%)

Query: 4   IQIQILIHP--SSKGNNVKPLYKTAATVTAVGAMLALGGCVSVPT--GPSVMAMPGKGKS 59
           +Q+Q+  HP    +GNN   LY     V    AM ALGG + VPT  G   + +PG+ ++
Sbjct: 246 VQVQVKQHPIFEREGNN---LY---CEVPINFAMAALGGEIEVPTLDGRVKLKVPGETQT 299

Query: 60  YEQFR 64
            + FR
Sbjct: 300 GKLFR 304


>FN0504 [E] COG0531 Amino acid transporters Fnu Fusobacterium nucleatum
          Length = 453

 Score = 30.4 bits (67), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 10  IHPSSKGNNVKPLYKTAATVTA-VGAMLALGGCVSVPTGPSVMAMPGK 56
           +   ++GNN+ P + T+  VTA VGA  A  G  SV +G + M  P K
Sbjct: 179 LLKDAEGNNLIPEFTTSVFVTALVGAFYAFTGFESVASGSADMEKPEK 226


>YPO0469 [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn
           finger domain Ype Yersinia pestis
          Length = 379

 Score = 30.0 bits (66), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 10/65 (15%)

Query: 4   IQIQILIHP--SSKGNNVKPLYKTAATVTAVGAMLALGGCVSVPT--GPSVMAMPGKGKS 59
           +Q+Q+  HP    +GNN   LY     V    AM ALGG + VPT  G   + +P + ++
Sbjct: 249 VQVQVKAHPIFEREGNN---LY---CEVPINFAMAALGGEIEVPTLDGRVKLKIPAETQT 302

Query: 60  YEQFR 64
            + FR
Sbjct: 303 GKMFR 307