BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1342.p (251 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0923 [C] COG2086 Electron transfer flavoprotein, beta subunit... 417 e-116 PA2952 [C] COG2086 Electron transfer flavoprotein, beta subunit ... 352 4e-97 mlr3487 [C] COG2086 Electron transfer flavoprotein, beta subunit... 341 7e-94 NMB2155 [C] COG2086 Electron transfer flavoprotein, beta subunit... 340 1e-93 NMA0242 [C] COG2086 Electron transfer flavoprotein, beta subunit... 340 1e-93 >RSc0923 [C] COG2086 Electron transfer flavoprotein, beta subunit Rso Ralstonia solanacearum Length = 249 Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust. Identities = 212/251 (84%), Positives = 230/251 (91%), Gaps = 2/251 (0%) Query: 1 MKVLVPVKRVVDYNVKVRVKSDGSGVDIANVKMSMNPFDEIAVEEAVRLKEGGKVTEVIA 60 MKVLV VKRV+DYNVKVRVK+DGSGVD+ANVKMSMNPFDEIAVEEAVRLKE G TEVIA Sbjct: 1 MKVLVAVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVEEAVRLKEAGVATEVIA 60 Query: 61 VSAGVTQCQETLRTAMAIGADRGILAEVGADVELQPLAVAKILKALAEKEQPQLIILGKQ 120 VS GV QCQETLRTAMAIGADRGIL E G ELQPLAVAK+LKAL +KEQPQLIILGKQ Sbjct: 61 VSCGVAQCQETLRTAMAIGADRGILVETGE--ELQPLAVAKLLKALIDKEQPQLIILGKQ 118 Query: 121 AIDDDCNQTGQMLAALLGWPQATFASKVVLEEGKVTVTREVDGGLETLALTLPAIITTDL 180 AIDDD NQTGQMLAAL G PQATFASKV +++G+ +VTREVDGGLETL++ LPA++TTDL Sbjct: 119 AIDDDANQTGQMLAALAGLPQATFASKVQIDDGRASVTREVDGGLETLSVKLPAVVTTDL 178 Query: 181 RLNEPRYVTLPNIMKAKKKQLDTVKPDELGVDVAPRVKTLKVAEPAKRSAGVKVPDVATL 240 RLNEPRYVTLPNIMKAKKKQLDTVKP++LGVDVAPR+KTLKVAEP KRSAGV VPDVATL Sbjct: 179 RLNEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVAEPPKRSAGVMVPDVATL 238 Query: 241 VAKLKNEAKVI 251 VAKLK EAKV+ Sbjct: 239 VAKLKTEAKVL 249 >PA2952 [C] COG2086 Electron transfer flavoprotein, beta subunit Pae Pseudomonas aeruginosa Length = 249 Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 185/251 (73%), Positives = 205/251 (81%), Gaps = 2/251 (0%) Query: 1 MKVLVPVKRVVDYNVKVRVKSDGSGVDIANVKMSMNPFDEIAVEEAVRLKEGGKVTEVIA 60 MKVLV VKRVVDYNVKVRVK+D SGVD+ANVKMSMNPF EIAVEEAVRLKE G TE++A Sbjct: 1 MKVLVAVKRVVDYNVKVRVKADNSGVDLANVKMSMNPFCEIAVEEAVRLKEKGVATEIVA 60 Query: 61 VSAGVTQCQETLRTAMAIGADRGILAEVGADVELQPLAVAKILKALAEKEQPQLIILGKQ 120 VS G T QE LRTA+A+GADR IL E ++ EL LAVAK+LKA+ +KEQPQL+ILGKQ Sbjct: 61 VSVGPTAAQEQLRTALALGADRAILVE--SNDELNSLAVAKLLKAVVDKEQPQLVILGKQ 118 Query: 121 AIDDDCNQTGQMLAALLGWPQATFASKVVLEEGKVTVTREVDGGLETLALTLPAIITTDL 180 AID D NQTGQMLAAL G+ Q TFASKV + KV VTRE+DGGL+T+AL LPAI+TTDL Sbjct: 119 AIDSDNNQTGQMLAALTGYAQGTFASKVEVAGDKVNVTREIDGGLQTVALNLPAIVTTDL 178 Query: 181 RLNEPRYVTLPNIMKAKKKQLDTVKPDELGVDVAPRVKTLKVAEPAKRSAGVKVPDVATL 240 RLNEPRY +LPNIMKAKKK LD V PD LGV A VKTLKV PA RSAG+KV VA L Sbjct: 179 RLNEPRYASLPNIMKAKKKPLDVVTPDALGVSTASTVKTLKVEAPAARSAGIKVKSVAEL 238 Query: 241 VAKLKNEAKVI 251 V KLKNEAKVI Sbjct: 239 VEKLKNEAKVI 249 >mlr3487 [C] COG2086 Electron transfer flavoprotein, beta subunit Mlo Mesorhizobium loti Length = 249 Score = 341 bits (875), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 175/251 (69%), Positives = 200/251 (79%), Gaps = 2/251 (0%) Query: 1 MKVLVPVKRVVDYNVKVRVKSDGSGVDIANVKMSMNPFDEIAVEEAVRLKEGGKVTEVIA 60 MK+LVPVKRVVD NVKVRVK+DGS V++ANVKM+MNPFDEIAVEEA+RLKE GK E+I Sbjct: 1 MKILVPVKRVVDANVKVRVKADGSAVELANVKMAMNPFDEIAVEEAIRLKEAGKAEEIIV 60 Query: 61 VSAGVTQCQETLRTAMAIGADRGILAEVGADVELQPLAVAKILKALAEKEQPQLIILGKQ 120 VS G Q QETLRTA+A+GADR IL V D + +PL VAK+LK + + EQP L+ILGKQ Sbjct: 61 VSIGPQQAQETLRTALAMGADRAIL--VKTDEQTEPLGVAKVLKGVVDAEQPGLVILGKQ 118 Query: 121 AIDDDCNQTGQMLAALLGWPQATFASKVVLEEGKVTVTREVDGGLETLALTLPAIITTDL 180 AIDDD NQTGQMLAALLGW Q TFASKVVL+ K VTREVDGGL+T+ L +PAIIT DL Sbjct: 119 AIDDDSNQTGQMLAALLGWAQGTFASKVVLDGDKAKVTREVDGGLQTVELKMPAIITADL 178 Query: 181 RLNEPRYVTLPNIMKAKKKQLDTVKPDELGVDVAPRVKTLKVAEPAKRSAGVKVPDVATL 240 RLN+PRY +LPNIMKAKKKQLD P + G DV PR+K +K EP R AGVKV VA L Sbjct: 179 RLNQPRYASLPNIMKAKKKQLDEKTPADYGADVKPRLKVIKTEEPGGRKAGVKVKSVAEL 238 Query: 241 VAKLKNEAKVI 251 V KLKNEA V+ Sbjct: 239 VDKLKNEAGVL 249 >NMB2155 [C] COG2086 Electron transfer flavoprotein, beta subunit Nme Neisseria meningitidis MC58 Length = 249 Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 173/251 (68%), Positives = 202/251 (80%), Gaps = 2/251 (0%) Query: 1 MKVLVPVKRVVDYNVKVRVKSDGSGVDIANVKMSMNPFDEIAVEEAVRLKEGGKVTEVIA 60 MK LV VKRVVDYNVKVRVK+DGS VDI NVKMSMNPFDEIAVEEAVRLKE GKV+E++A Sbjct: 1 MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVEEAVRLKEAGKVSEIVA 60 Query: 61 VSAGVTQCQETLRTAMAIGADRGILAEVGADVELQPLAVAKILKALAEKEQPQLIILGKQ 120 VS G +C+ETLRTA+A+GADR I E D +L+ LAVAK+LKA+A+KE PQ+ LGKQ Sbjct: 61 VSLGEKKCEETLRTALAMGADRAIHVET--DTKLESLAVAKLLKAVADKENPQIFFLGKQ 118 Query: 121 AIDDDCNQTGQMLAALLGWPQATFASKVVLEEGKVTVTREVDGGLETLALTLPAIITTDL 180 AIDDD NQ QMLAALL Q TFASKV +E +V + RE+DGG ET+AL LPA+I+ DL Sbjct: 119 AIDDDANQVAQMLAALLNAAQGTFASKVQIEGDEVQIVREIDGGEETIALKLPAVISADL 178 Query: 181 RLNEPRYVTLPNIMKAKKKQLDTVKPDELGVDVAPRVKTLKVAEPAKRSAGVKVPDVATL 240 RLNEPR+V LPNIM AKKK L+ + PD+L D++PR+KT+K AEP R AGVKV VA L Sbjct: 179 RLNEPRFVKLPNIMAAKKKPLEKLTPDDLVADISPRLKTVKFAEPKARQAGVKVASVAEL 238 Query: 241 VAKLKNEAKVI 251 V KLKNEAKVI Sbjct: 239 VEKLKNEAKVI 249 >NMA0242 [C] COG2086 Electron transfer flavoprotein, beta subunit NmA Neisseria meningitidis Z2491 Length = 249 Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 173/251 (68%), Positives = 201/251 (80%), Gaps = 2/251 (0%) Query: 1 MKVLVPVKRVVDYNVKVRVKSDGSGVDIANVKMSMNPFDEIAVEEAVRLKEGGKVTEVIA 60 MK LV VKRVVDYNVKVRVK+DGS VDI NVKMSMNPFDEIAVEEAVRLKE GKV+E++A Sbjct: 1 MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVEEAVRLKEAGKVSEIVA 60 Query: 61 VSAGVTQCQETLRTAMAIGADRGILAEVGADVELQPLAVAKILKALAEKEQPQLIILGKQ 120 VS G +C+ETLRTA+A+GADR I E D +L+ LAVAK+LKA+A+KE PQ+ LGKQ Sbjct: 61 VSLGEKKCEETLRTALAMGADRAIHVET--DTKLESLAVAKLLKAVADKENPQIFFLGKQ 118 Query: 121 AIDDDCNQTGQMLAALLGWPQATFASKVVLEEGKVTVTREVDGGLETLALTLPAIITTDL 180 AIDDD NQ QMLAALL Q TFASKV +E G+V + RE+DGG ET+AL LPA+I+ DL Sbjct: 119 AIDDDANQVAQMLAALLNAAQGTFASKVHIEGGEVQIVREIDGGEETIALKLPAVISADL 178 Query: 181 RLNEPRYVTLPNIMKAKKKQLDTVKPDELGVDVAPRVKTLKVAEPAKRSAGVKVPDVATL 240 RLNEPR+V LPNIM AKKK L+ + P +L D+ PR+KT+K AEP R AGVKV VA L Sbjct: 179 RLNEPRFVKLPNIMAAKKKPLEKLAPADLATDILPRLKTVKFAEPKARQAGVKVASVAEL 238 Query: 241 VAKLKNEAKVI 251 V KLKNEAKVI Sbjct: 239 VEKLKNEAKVI 249