BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1330.p (319 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value VC1369 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 62 2e-09 PA3938 [P] COG4521 ABC-type taurine transport system, periplasmi... 61 4e-09 tauA [P] COG4521 ABC-type taurine transport system, periplasmic ... 57 4e-08 ZtauA [P] COG4521 ABC-type taurine transport system, periplasmic... 57 4e-08 ECs0419 [P] COG4521 ABC-type taurine transport system, periplasm... 57 4e-08 >VC1369 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Vch Vibrio cholerae Length = 338 Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 107/254 (42%), Gaps = 7/254 (2%) Query: 26 APALPALAQGAPILIGVGADPVFTAFYVAANEKLFAKHGVPNVSVQSYTDGGEALNALVA 85 A A+ A API I V P+ + FY+A F + G+ +V + + + G + AL Sbjct: 31 ATAISVNANAAPIKIAVSQTPLSSPFYLADQLGFFKQQGI-DVELVACSGGVQCSQALFQ 89 Query: 86 NQVQLGCAGEPTHIVR-LSRAELRPLAVTYQSRTYVKLVA--RKDIATVDKI--KKFGIV 140 V A E + R + LA QS +KL+A + I +V + K+ G++ Sbjct: 90 GAVSYATASESVAMFSSFERQDFLILASFVQSDNDLKLLALESETIRSVADLHNKRVGMI 149 Query: 141 AGSVSEYVTGLTLKTLNIDPAKVELVRSGPPELPALLARGDIDAYFVWEPW-PTLGVQQG 199 S SE+ L N+ ++ V +L L +DA +WEPW +GV Sbjct: 150 RASASEFYFDSLLLANNLKGIPIDKVYGTADQLYQQLFDKQLDAISIWEPWGYKIGVAAE 209 Query: 200 GHILMTAGDVGYTSTLWLSASASWLAANKEAAGKILKALAEASEITRKDPARAAKSVQAV 259 + + YT + L K+ + ILKAL +A + ++P R V V Sbjct: 210 SKVTNLSLPGIYTLSFNLLTMKPTTEEEKQRSLAILKALKQAIDWIHQNPERTRYRVAGV 269 Query: 260 THIPVAQTLNSLKD 273 +I Q S +D Sbjct: 270 LNIDEKQLRWSWQD 283 >PA3938 [P] COG4521 ABC-type taurine transport system, periplasmic component Pae Pseudomonas aeruginosa Length = 337 Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 87/199 (43%), Gaps = 14/199 (7%) Query: 20 LLAAGAAPALPALAQGAPILIG--VGADPVFTAFYVAANEKLFAKHGVPNVSVQSYTDGG 77 L+AA A +L AQ A I +G G DP V + L+ K + + + G Sbjct: 10 LVAALAFASLSVAAQAADITVGYQTGIDPT----KVPQADGLYEKAIGEKIDWRRFNSGP 65 Query: 78 EALNALVANQVQLGCAGEPTHIVRLSRA-ELRPLAVTYQSRTYVKLVARKD--IATVDKI 134 E + AL + +QLG G SR + V+ Q LV R I + + Sbjct: 66 EVIAALASGDLQLGNIGSSPLAAATSRKLPIVAFIVSAQINAAEALVVRNGSGIGKPEDL 125 Query: 135 --KKFGIVAGSVSEYVTGLTLKTLNIDPAKVELVRSGPPELPALLARGDIDAYFVWEPWP 192 K S S Y LK IDP+KV++V P E+ A RGDID FVW P Sbjct: 126 VGKTIATPFVSTSHYSLLGALKHWQIDPSKVKIVNLNPAEIAAAWRRGDIDGAFVWS--P 183 Query: 193 TLG-VQQGGHILMTAGDVG 210 LG +++ G +L A +VG Sbjct: 184 ALGEIKKSGKVLTDAAEVG 202 >tauA [P] COG4521 ABC-type taurine transport system, periplasmic component Eco Escherichia coli K12 Length = 339 Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 8/195 (4%) Query: 19 SLLAAGAAPALPALAQGAPILIGVGADPVFTAFYVAANEKLFAKHGVPNVSVQSYTDGGE 78 +LLAA A A A A + A+P VA + FAK V + + G Sbjct: 27 TLLAALAFIAFQAQAVNVTVAYQTSAEPA----KVAQADNTFAKESGATVDWRKFDSGAS 82 Query: 79 ALNALVANQVQLGCAGE-PTHIVRLSRAELRPLAVTYQSRTYVKLVARKDIATVDKI--K 135 + AL + VQ+G G P + + + + + LV +K I+ + + K Sbjct: 83 IVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDLIGK 142 Query: 136 KFGIVAGSVSEYVTGLTLKTLNIDPAKVELVRSGPPELPALLARGDIDAYFVWEPWPTLG 195 + + S + Y LK I P +VE+V PP + A RGDID +VW P Sbjct: 143 RIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPAIIAAWQRGDIDGAYVWAP-AVNA 201 Query: 196 VQQGGHILMTAGDVG 210 +++ G +L + VG Sbjct: 202 LEKDGKVLTDSEQVG 216 >ZtauA [P] COG4521 ABC-type taurine transport system, periplasmic component EcZ Escherichia coli O157:H7 EDL933 Length = 320 Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 8/195 (4%) Query: 19 SLLAAGAAPALPALAQGAPILIGVGADPVFTAFYVAANEKLFAKHGVPNVSVQSYTDGGE 78 +LLAA A A A A + A+P VA + FAK V + + G Sbjct: 8 TLLAALAFIAFQAQAVNVTVAYQTSAEPA----KVAQADNTFAKESGATVDWRKFDSGAS 63 Query: 79 ALNALVANQVQLGCAGE-PTHIVRLSRAELRPLAVTYQSRTYVKLVARKDIATVDKI--K 135 + AL + VQ+G G P + + + + + LV +K I+ + + K Sbjct: 64 IVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDLIGK 123 Query: 136 KFGIVAGSVSEYVTGLTLKTLNIDPAKVELVRSGPPELPALLARGDIDAYFVWEPWPTLG 195 + + S + Y LK I P +VE+V PP + A RGDID +VW P Sbjct: 124 RIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPAIIAAWQRGDIDGAYVWAP-AVNA 182 Query: 196 VQQGGHILMTAGDVG 210 +++ G +L + VG Sbjct: 183 LEKDGKVLTDSEQVG 197 >ECs0419 [P] COG4521 ABC-type taurine transport system, periplasmic component Ecs Escherichia coli O157:H7 Length = 320 Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 8/195 (4%) Query: 19 SLLAAGAAPALPALAQGAPILIGVGADPVFTAFYVAANEKLFAKHGVPNVSVQSYTDGGE 78 +LLAA A A A A + A+P VA + FAK V + + G Sbjct: 8 TLLAALAFIAFQAQAVNVTVAYQTSAEPA----KVAQADNTFAKESGATVDWRKFDSGAS 63 Query: 79 ALNALVANQVQLGCAGE-PTHIVRLSRAELRPLAVTYQSRTYVKLVARKDIATVDKI--K 135 + AL + VQ+G G P + + + + + LV +K I+ + + K Sbjct: 64 IVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDLIGK 123 Query: 136 KFGIVAGSVSEYVTGLTLKTLNIDPAKVELVRSGPPELPALLARGDIDAYFVWEPWPTLG 195 + + S + Y LK I P +VE+V PP + A RGDID +VW P Sbjct: 124 RIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPAIIAAWQRGDIDGAYVWAP-AVNA 182 Query: 196 VQQGGHILMTAGDVG 210 +++ G +L + VG Sbjct: 183 LEKDGKVLTDSEQVG 197