BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1329.p (265 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 234 1e-61 AGc259 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 224 2e-58 SMc02346 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate tran... 223 3e-58 mll1253 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 222 5e-58 CAC0107 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 222 5e-58 >MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mac Methanosarcina acetivorans str.C2A Length = 268 Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 123/246 (50%), Positives = 160/246 (65%), Gaps = 13/246 (5%) Query: 7 VSIKRVGLSIGKHEIMAG------IDLDIRAGEFICLLGPSGCGKSTLLNAIAGFQEV-S 59 VS+K V K E +G I D++ GEFICLLGPSGCGK+TLL AG + + S Sbjct: 18 VSVKNVSRVFSKKEDESGTEALHNISFDVQDGEFICLLGPSGCGKTTLLRIAAGLETLTS 77 Query: 60 GEISIGGQRIKGPGLDRGVVFQSSEALFPWLTVRENVEYGLRLRGIASAERRTAAERYVS 119 GEI++ G I GP RG+VFQ +LFPW TV +N+ +GL ++GI +E R E+Y+ Sbjct: 78 GEITLNGVPITGPDPKRGMVFQQY-SLFPWRTVIDNITFGLEMQGIKKSEARKQVEKYLE 136 Query: 120 LVGLRHAIDKFPGELSGGMRQRAQIARVLVNQPSVVLMDEPFGALDAQTREVLQSELERI 179 LVGL + +P ELSGGM+QRA IAR L N+P V+LMDEPFGALDAQTR VLQ EL +I Sbjct: 137 LVGLGQFKNSYPHELSGGMQQRAAIARALANEPEVLLMDEPFGALDAQTRNVLQDELLKI 196 Query: 180 WKSTGCTIVFVTHDIWEAILLADRVVTMTAGPRAHIKTIETVDLPHPRDPADPACMALYA 239 W+ T +FVTH + EA+ L+DR+V MT+ P +K I +V+LP PR P Sbjct: 197 WEQKHVTFLFVTHSVDEAVFLSDRIVVMTSRP-GRVKEIVSVELPRPRSRTSPEV----N 251 Query: 240 RIRDDI 245 R+RD + Sbjct: 252 RLRDHV 257 >AGc259 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 266 Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 116/227 (51%), Positives = 155/227 (68%), Gaps = 6/227 (2%) Query: 26 DLDIRAGEFICLLGPSGCGKSTLLNAIAGF-QEVSGEISIGGQRIKGPGLDRGVVFQSSE 84 +L+I +F+ +LGPSGCGKSTLL IAG + +GE+ + G+ + GPG DRG+VFQS Sbjct: 34 NLEIPRNDFVTILGPSGCGKSTLLRIIAGLDRPTTGEVLLSGKAVTGPGADRGMVFQSY- 92 Query: 85 ALFPWLTVRENVEYGLRLRGIASAERRTAAERYVSLVGLRHAIDKFPGELSGGMRQRAQI 144 LFPWLT+RENV +GLR RG+A E+ + Y+ VGLR + +P +LSGGM+QR I Sbjct: 93 TLFPWLTIRENVAFGLRERGVAEKEKWEIVDSYIDKVGLRGFENHWPKQLSGGMQQRTAI 152 Query: 145 ARVLVNQPSVVLMDEPFGALDAQTREVLQSELERIWKSTGCTIVFVTHDIWEAILLADRV 204 AR L N P ++L+DEPFGALD QTR ++Q L IW+ T++FVTHDI EA+ +A RV Sbjct: 153 ARALANGPKILLLDEPFGALDNQTRGLMQELLLGIWEREQKTVIFVTHDIEEAVFMASRV 212 Query: 205 VTMTAGPRAHIKTIETVDLPHPRD---PADPACMALYARIRDDIGAE 248 VTM+A P IK+I VDLPHPR A P L A++ ++I +E Sbjct: 213 VTMSARP-GRIKSITPVDLPHPRHYTIKASPEFSELRAKLTEEIRSE 258 >SMc02346 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Sme Sinorhizobium meliloti Length = 278 Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 127/259 (49%), Positives = 160/259 (61%), Gaps = 8/259 (3%) Query: 4 GSSVSIKRVGLSIGKHEIMAGIDLDIRAGEFICLLGPSGCGKSTLLNAIAGFQ-EVSGEI 62 G +V++ G++ + ++ G+DL I GEFI L+GPSG GKS LL+ IAG SG Sbjct: 18 GQTVTVD--GVTSNRIAVLDGVDLSIDRGEFITLVGPSGSGKSVLLDVIAGLTGATSGVA 75 Query: 63 SIGGQRIKGPGLDRGVVFQSSEALFPWLTVRENVEYGLRLRGIASAERRTAAERYVSLVG 122 SI G + P VFQ ALFPW T +NVEY L +RG+ +AERR A ++ L G Sbjct: 76 SIDGIEVSKPHARTAYVFQQY-ALFPWRTALQNVEYALEVRGVPAAERREKARHFLHLFG 134 Query: 123 LRHAIDKFPGELSGGMRQRAQIARVLVNQPSVVLMDEPFGALDAQTREVLQSELERIWKS 182 L D+FP +LSGGM+QR IAR L P V+LMDEPF ALDAQTR++LQSEL RIW+ Sbjct: 135 LNGFEDRFPSQLSGGMQQRVAIARALSTDPQVLLMDEPFAALDAQTRDILQSELLRIWEQ 194 Query: 183 TGCTIVFVTHDIWEAILLADRVVTMTAGPRAHIKTIETVDLPHPRD---PADPACMALYA 239 T+VFVTH I EAI LADRVV MTA P A +K I +DLP PRD A A Sbjct: 195 IKTTVVFVTHSIDEAIYLADRVVVMTARP-ARVKEIVEIDLPRPRDLDIRNGEAFNAYRG 253 Query: 240 RIRDDIGAEVTRVLRAQGL 258 R+ + + EV++ R L Sbjct: 254 RVWESLRDEVSKAQRDWAL 272 >mll1253 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mlo Mesorhizobium loti Length = 267 Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 120/236 (50%), Positives = 153/236 (64%), Gaps = 6/236 (2%) Query: 25 IDLDIRAGEFICLLGPSGCGKSTLLNAIAGFQEVS-GEISIGGQRIKGPGLDRGVVFQSS 83 IDL + A +FI +LGPSGCGKSTLL +AG + S G + + + + PG DRG+VFQS Sbjct: 32 IDLAVAANDFITILGPSGCGKSTLLRIVAGLEAPSEGRVLLDDKAVTRPGPDRGMVFQSY 91 Query: 84 EALFPWLTVRENVEYGLRLRGIASAERRTAAERYVSLVGLRHAIDKFPGELSGGMRQRAQ 143 LFPWLTV EN+ +GLR RG+A ER YV LVGL+ + +P +LSGGM+QR Sbjct: 92 -TLFPWLTVSENIAFGLRERGMAPKERDDIVASYVDLVGLKGFENHWPKQLSGGMQQRTA 150 Query: 144 IARVLVNQPSVVLMDEPFGALDAQTREVLQSELERIWKSTGCTIVFVTHDIWEAILLADR 203 IAR L N P ++L+DEPFGALD QTR ++Q L IW+ T++FVTHDI EAI +A R Sbjct: 151 IARALANDPEILLLDEPFGALDNQTRGLMQELLLGIWERRKKTVLFVTHDIEEAIFMASR 210 Query: 204 VVTMTAGPRAHIKTIETVDLPHPRD---PADPACMALYARIRDDIGAEVTRVLRAQ 256 V+ MTA P IK+ +DLPHPR P AL AR+ +DI E R +AQ Sbjct: 211 VIVMTARP-GSIKSDVAIDLPHPRHYTLKTSPEFSALKARLTEDIRVEAMRTAQAQ 265 >CAC0107 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Cac Clostridium acetobutylicum Length = 279 Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 115/234 (49%), Positives = 153/234 (65%), Gaps = 5/234 (2%) Query: 25 IDLDIRAGEFICLLGPSGCGKSTLLNAIAGFQE-VSGEISIGGQRIKGPGLDRGVVFQSS 83 ++L I+ GEFICLLGPSGCGKSTLLN IAG ++ G + + IK PG DR +FQ S Sbjct: 25 VNLSIKKGEFICLLGPSGCGKSTLLNIIAGLEKPTKGIVYLNNMEIKAPGPDRAFMFQES 84 Query: 84 EALFPWLTVRENVEYGLRLRGIASAERRTAAERYVSLVGLRHAIDKFPGELSGGMRQRAQ 143 ALFPWL V +NVE+G++++ + ERR A +Y+ +V L + + ELSGGMRQR Sbjct: 85 -ALFPWLKVIDNVEFGMKIKDVPKEERREKALKYLKMVHLTKFQNSYVHELSGGMRQRVA 143 Query: 144 IARVLVNQPSVVLMDEPFGALDAQTREVLQSELERIWKSTGCTIVFVTHDIWEAILLADR 203 +AR L V+LMDEPF ALD+QT+ +LQ EL+ IW T TIVFVTH++ EA+LLADR Sbjct: 144 LARALTLDSEVLLMDEPFSALDSQTKSILQLELQNIWWETKKTIVFVTHNVEEAVLLADR 203 Query: 204 VVTMTAGPRAHIKTIETVDLPHPRDPADPACMALYAR-IRDDIGAEVTRVLRAQ 256 VV M A P IK I + L PR+ A ++ AR + D+ EV +V + + Sbjct: 204 VVVMAANP-GRIKNIFEIKLARPRE-AQSVDLSYVAREVMRDLKEEVEKVAKTE 255