BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1300.p         (78 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA3501 Non COG                                                         94   1e-19
CC0619 Non COG                                                         28   5.8  

>PA3501 Non COG
          Length = 72

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 54/73 (73%), Gaps = 1/73 (1%)

Query: 6  VTDVYLNPHQARRRAPTQFEDLLGDAIERAYAAGIHELSALVAHLNRTGPSCPYNDGVWT 65
          + D YL PHQAR R P  FEDLLGD+IERAYAAG+H+L  L+ +LN+ GP+CP   G WT
Sbjct: 1  MQDRYLEPHQARTREPNAFEDLLGDSIERAYAAGLHDLPGLLGYLNQAGPTCP-GGGPWT 59

Query: 66 EDNYQQEIARLAA 78
          E+ Y+  +ARL A
Sbjct: 60 EEAYKTLMARLGA 72


>CC0619 Non COG
          Length = 660

 Score = 28.1 bits (61), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 1   MMVATVTDVYLNPHQARRRAPTQFED---LLGDAIERAYAAGIHELSALVAHLN 51
           +++  V D YL   Q RR   TQ+E    +LG A+ R     I +  AL A L 
Sbjct: 299 LVIPAVWDWYLQWRQGRRGFYTQWEVEMLMLGAALTRRETGWIRQTPALAARLR 352