BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1289.p (287 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3512 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 372 e-103 AGl1202 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 138 1e-32 RSc1200 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 134 2e-31 mlr6798 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 134 2e-31 AGl128GM [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate tran... 134 2e-31 >PA3512 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 258 Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust. Identities = 181/237 (76%), Positives = 210/237 (88%) Query: 51 WQWGPGLLGLPEYILPNFMQVLREGVVMWNNAQLLQHFGITAMEVVLGFFFGALLGLAVG 110 WQWGPGLLG+PE++LP +V EGV MW+ A LL+H IT++E+V+GF GALLG+++G Sbjct: 22 WQWGPGLLGMPEFVLPGLSRVAAEGVAMWHGAGLLEHTAITSLEIVVGFALGALLGVSIG 81 Query: 111 VALGLSPRAEAMLSPYILALQIAPKVAFAPLFVMWLGYTIYPKIIVAVLIVFFPIMINVL 170 VALGLSP EAMLSPYILALQIAPKVAFAPLFVMWLGYT+YPKI++AVLIVFFP+MINVL Sbjct: 82 VALGLSPTTEAMLSPYILALQIAPKVAFAPLFVMWLGYTVYPKILIAVLIVFFPVMINVL 141 Query: 171 SAIRTVDPDMVNLVRTLNAGRWQIFHLVEFRSALPALFSGLRIASTLSVIGVTVGELVGG 230 SAIRTVDPDM+NLVR ++A RWQIF LVEF SA+ ALFSGLRIASTL+VIGVTVGELVGG Sbjct: 142 SAIRTVDPDMINLVRAMSASRWQIFRLVEFPSAMAALFSGLRIASTLAVIGVTVGELVGG 201 Query: 231 NQGLGYLLVDGEGQGNTAAVFVSIVALTLIGVVTYGMVVWAERKVLHYLPRAVTSTV 287 N+GLG+LLVD EGQGNTA VFV+IV LTLIGV+ YG VVWAE++VLHYLP+A TV Sbjct: 202 NKGLGFLLVDAEGQGNTAGVFVAIVMLTLIGVLAYGAVVWAEKRVLHYLPKANLGTV 258 >AGl1202 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 265 Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/240 (33%), Positives = 132/240 (55%), Gaps = 2/240 (0%) Query: 43 LLLLFLAAWQWGPGLLGLPEYILPNFMQVLREGVVMW-NNAQLLQHFGITAMEVVLGFFF 101 LL++ L WQ G + + P ++++ V+ W +A +H GIT E VLG+ Sbjct: 20 LLVVLLGGWQLGVSSGAIDRFFFPAPYDIVKQ-VIDWVADAGFYKHVGITLSETVLGYII 78 Query: 102 GALLGLAVGVALGLSPRAEAMLSPYILALQIAPKVAFAPLFVMWLGYTIYPKIIVAVLIV 161 G LG+ GV LGLSP +L P+I A+ P+V AP+FV+WLG ++ K+ +AV +V Sbjct: 79 GTGLGVGAGVWLGLSPFVARVLDPFIKAVNAIPRVVLAPIFVLWLGLGLWSKVALAVTLV 138 Query: 162 FFPIMINVLSAIRTVDPDMVNLVRTLNAGRWQIFHLVEFRSALPALFSGLRIASTLSVIG 221 FF N + +R V+P +++ R L A R + V F +A + S LR + +V+G Sbjct: 139 FFVTFFNAMQGVREVNPVVLSNTRILGAKRSDLLRHVYFPAAASWILSSLRTSVGFAVVG 198 Query: 222 VTVGELVGGNQGLGYLLVDGEGQGNTAAVFVSIVALTLIGVVTYGMVVWAERKVLHYLPR 281 +GE +G + GLGYL+ EG + VF I+ L + ++ ++ AE+K++ + P Sbjct: 199 AIIGEYLGASAGLGYLIARSEGNFDAVGVFAGIIILAVFVLIIDLILDVAEKKLITWRPN 258 >RSc1200 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Rso Ralstonia solanacearum Length = 263 Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 111/202 (54%) Query: 80 NNAQLLQHFGITAMEVVLGFFFGALLGLAVGVALGLSPRAEAMLSPYILALQIAPKVAFA 139 + QH G+T E VL F G GL G+ L LSP A A+L PYI A P+V A Sbjct: 55 TEGDIYQHLGVTLAETVLAFGIGTATGLGAGLWLALSPSASAVLDPYIKAANSMPRVILA 114 Query: 140 PLFVMWLGYTIYPKIIVAVLIVFFPIMINVLSAIRTVDPDMVNLVRTLNAGRWQIFHLVE 199 P+F +W G I+ K+ +AV +VFF + NV ++ V P ++ R L A R Q+ V Sbjct: 115 PIFGVWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGASRRQLLRFVY 174 Query: 200 FRSALPALFSGLRIASTLSVIGVTVGELVGGNQGLGYLLVDGEGQGNTAAVFVSIVALTL 259 SA +FS L + L+ +G VGE +G +G+GYL++ EG + VF IV LT+ Sbjct: 175 LPSATSWVFSSLHTSVGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTV 234 Query: 260 IGVVTYGMVVWAERKVLHYLPR 281 +V +V AE++++ + P+ Sbjct: 235 FALVLDWLVGLAEKRLMRWQPK 256 >mlr6798 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Mlo Mesorhizobium loti Length = 275 Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/242 (31%), Positives = 142/242 (58%), Gaps = 2/242 (0%) Query: 40 SLLLLLLFLAAWQWGPGLLGLPEYILPNFMQVLREGVVMWNNAQLLQHFGITAMEVVLGF 99 +++LLL+ + W+ + + +I+P ++ + V W L+Q +TA E++ GF Sbjct: 32 AVILLLVTIVVWEAVVRIFAISAFIIPAPSEIAQSLVAQWGT--LMQATLVTAGEILFGF 89 Query: 100 FFGALLGLAVGVALGLSPRAEAMLSPYILALQIAPKVAFAPLFVMWLGYTIYPKIIVAVL 159 ++G+A+ + + L P ++ Q PKVA AP+F++W GY + PKI + ++ Sbjct: 90 LVSVVVGIAIALVIVRFDWLGRALYPLVVLFQNVPKVALAPIFILWFGYGLAPKIGLILV 149 Query: 160 IVFFPIMINVLSAIRTVDPDMVNLVRTLNAGRWQIFHLVEFRSALPALFSGLRIASTLSV 219 I FFP+ +++L+ +++VD +++L+ ++ A R QI + +LP L +G +IA+TLSV Sbjct: 150 IAFFPVTLSMLAGMQSVDRSLLSLMNSVGASRTQILFRIRVPHSLPNLMAGTKIAATLSV 209 Query: 220 IGVTVGELVGGNQGLGYLLVDGEGQGNTAAVFVSIVALTLIGVVTYGMVVWAERKVLHYL 279 IG VGE G + GLGY++ Q +TA VF +++ ++++G+ Y ER V+ + Sbjct: 210 IGAIVGEFAGASDGLGYVIQFASTQLDTALVFAALLLVSVLGIAFYYAAEILERIVVPWA 269 Query: 280 PR 281 P+ Sbjct: 270 PK 271 >AGl128GM [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 267 Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 82/224 (36%), Positives = 138/224 (61%), Gaps = 4/224 (1%) Query: 51 WQWGPGLLGLPEYILPNFMQVLREGVVMWNNAQLLQHFGITAME-VVLGFFFGALLGLAV 109 W+ L +PEYILP +V + ++NN ++ + ++ +VLGF ++G + Sbjct: 26 WEIAVRALKVPEYILPAPSRVFAD---LYNNVPVVFTASLYTLQPMVLGFLVAVVMGTLL 82 Query: 110 GVALGLSPRAEAMLSPYILALQIAPKVAFAPLFVMWLGYTIYPKIIVAVLIVFFPIMINV 169 + + S EA+ P ++ LQI PK+A APLF++W+G+ + KI++ L+ FFPI++N Sbjct: 83 ALLVVYSRAFEAIFYPLLVILQIIPKIAIAPLFIIWVGFGLPSKILLVFLLSFFPIVVNS 142 Query: 170 LSAIRTVDPDMVNLVRTLNAGRWQIFHLVEFRSALPALFSGLRIASTLSVIGVTVGELVG 229 + A ++++PD+ +L ++ AGR +IF VE ALP+LF+G ++A+ LS V E V Sbjct: 143 IVAFKSIEPDVYDLAKSYRAGRLKIFWKVELPGALPSLFAGFKVAAALSATAAVVAEFVA 202 Query: 230 GNQGLGYLLVDGEGQGNTAAVFVSIVALTLIGVVTYGMVVWAER 273 + GLGYLL++ G NT+ F I+ L+L+G++ YG+V ER Sbjct: 203 SDNGLGYLLLNYNGNMNTSMTFAVIIVLSLLGLLLYGIVELIER 246