BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1284.p (249 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF0680 [E] COG1126 ABC-type polar amino acid transport system, A... 311 8e-85 lin0841 [E] COG1126 ABC-type polar amino acid transport system, ... 305 5e-83 SPy1506 [E] COG1126 ABC-type polar amino acid transport system, ... 296 3e-80 lin2353 [E] COG1126 ABC-type polar amino acid transport system, ... 295 5e-80 SP0824 [E] COG1126 ABC-type polar amino acid transport system, A... 294 1e-79 >AF0680 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Afu Archaeoglobus fulgidus Length = 242 Score = 311 bits (798), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 145/236 (61%), Positives = 186/236 (78%) Query: 8 LEIVGLHKSYEGNTVLRGIDLRVRPGQLICVIGPSGSGKSTMLRCCNRLEEPSAGQIVVD 67 LEI+ LHK + VL+G+ ++V G+++ +IGPSGSGKST+LRC NRLEEP++G+I++D Sbjct: 4 LEIIDLHKRFGELEVLKGVTMKVEKGEVVVIIGPSGSGKSTLLRCINRLEEPTSGKILLD 63 Query: 68 GVDIMHARADLNAIRQKIGMVFQQFNLYPHMSVLGNVMLALKKVQKHSHAEAERRARRAL 127 GVDI +++ D+N +RQ+IG+VFQQFNL+PH++ L NV LA K++K S EAE R L Sbjct: 64 GVDITNSKIDINKVRQRIGIVFQQFNLFPHLTALQNVTLAPIKIKKMSKREAEELGMRLL 123 Query: 128 EQVGMLEKAAAFPGQLSGGQQQRVGIARGIALEPKVMLFDEPTSALDPELVGSVLQVMRQ 187 E+VG+ +KA +P QLSGGQQQRV IAR +A+ P+VMLFDE TSALDPELV VL VM+Q Sbjct: 124 EKVGLEDKADYYPAQLSGGQQQRVAIARALAMNPEVMLFDEVTSALDPELVKEVLDVMKQ 183 Query: 188 LREAGMTMLVVTHEMAFARAAADRVVFMDGGVIVEEGPPEQIFGNPQQARTKTFLA 243 L GMTM+VVTHEM FAR DRV+FMDGGVIVEEG PEQIF NP+ RT+ FL+ Sbjct: 184 LARDGMTMVVVTHEMGFAREVGDRVIFMDGGVIVEEGKPEQIFSNPKHERTRKFLS 239 >lin0841 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Lin Listeria innocua Length = 242 Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 140/238 (58%), Positives = 180/238 (75%) Query: 8 LEIVGLHKSYEGNTVLRGIDLRVRPGQLICVIGPSGSGKSTMLRCCNRLEEPSAGQIVVD 67 L++ GL KS+ N VL+GID+ V+ G+++CVIGPSGSGKST LRC N LEE +AG++VVD Sbjct: 4 LKVTGLKKSFGANEVLKGIDIEVKEGEVVCVIGPSGSGKSTFLRCMNNLEEITAGEVVVD 63 Query: 68 GVDIMHARADLNAIRQKIGMVFQQFNLYPHMSVLGNVMLALKKVQKHSHAEAERRARRAL 127 +I + D+N +R+ IGMVFQ FNL+PH+SVL N+ LA +++K A+ A R L Sbjct: 64 DFNITDKKVDINKVRENIGMVFQHFNLFPHLSVLENITLAPVELKKMDKEAAKSNALRLL 123 Query: 128 EQVGMLEKAAAFPGQLSGGQQQRVGIARGIALEPKVMLFDEPTSALDPELVGSVLQVMRQ 187 EQVG+ EKA FP QLSGGQ+QRV IAR +A++P +MLFDEPTSALDPE+VG VL VM++ Sbjct: 124 EQVGLKEKADEFPNQLSGGQKQRVAIARALAMDPDIMLFDEPTSALDPEMVGEVLGVMKE 183 Query: 188 LREAGMTMLVVTHEMAFARAAADRVVFMDGGVIVEEGPPEQIFGNPQQARTKTFLARL 245 L + GMTM++VTHEM FAR DRV+FMDGG IVEEG P IF NP RT +FL ++ Sbjct: 184 LAKDGMTMMIVTHEMGFAREVGDRVIFMDGGYIVEEGKPADIFDNPTNERTISFLDKV 241 >SPy1506 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Spy Streptococcus pyogenes M1 GAS Length = 244 Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 136/239 (56%), Positives = 185/239 (77%) Query: 7 ILEIVGLHKSYEGNTVLRGIDLRVRPGQLICVIGPSGSGKSTMLRCCNRLEEPSAGQIVV 66 I+ I LHK Y N VL+GIDL + PG+++ +IGPSGSGKST+LR N LE P+ GQI Sbjct: 5 IISIKDLHKYYGHNEVLKGIDLDIMPGEVVVIIGPSGSGKSTLLRTMNLLEVPTKGQIRF 64 Query: 67 DGVDIMHARADLNAIRQKIGMVFQQFNLYPHMSVLGNVMLALKKVQKHSHAEAERRARRA 126 +G+DI + D+ ++R+K+GMVFQQFNL+P+M++L N+ L+ K + + AEA++ A Sbjct: 65 EGIDITDKKNDIFSMREKMGMVFQQFNLFPNMTILENITLSPIKTKGMAKAEADKTALSL 124 Query: 127 LEQVGMLEKAAAFPGQLSGGQQQRVGIARGIALEPKVMLFDEPTSALDPELVGSVLQVMR 186 L++VG+ EKA A+P LSGGQQQR+ IARG+A++P V+LFDEPTSALDPE+VG VL VM+ Sbjct: 125 LDKVGLSEKAKAYPASLSGGQQQRIAIARGLAMDPDVLLFDEPTSALDPEMVGEVLAVMQ 184 Query: 187 QLREAGMTMLVVTHEMAFARAAADRVVFMDGGVIVEEGPPEQIFGNPQQARTKTFLARL 245 L ++GMTM++VTHEM FA+ ADRV+FMDGGVIVEEG P Q+F ++ RTK FL+R+ Sbjct: 185 DLAKSGMTMVIVTHEMGFAKEVADRVMFMDGGVIVEEGSPNQLFDLTKEERTKDFLSRV 243 >lin2353 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Lin Listeria innocua Length = 241 Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 138/239 (57%), Positives = 177/239 (74%) Query: 7 ILEIVGLHKSYEGNTVLRGIDLRVRPGQLICVIGPSGSGKSTMLRCCNRLEEPSAGQIVV 66 ++ I LHK + VL+GIDL + G+++ VIGPSGSGKST LRC N LE+P+ G I+ Sbjct: 1 MINIKNLHKHFGKLEVLKGIDLEIASGEVVVVIGPSGSGKSTFLRCLNLLEQPTTGTILF 60 Query: 67 DGVDIMHARADLNAIRQKIGMVFQQFNLYPHMSVLGNVMLALKKVQKHSHAEAERRARRA 126 + D+M + ++N +RQK+GMVFQ FNL+PH +VL N+MLA KV+ A+ A Sbjct: 61 ENKDLMAKQTNVNELRQKMGMVFQNFNLFPHKNVLENLMLAPMKVKNEDSTAAKEHALSL 120 Query: 127 LEQVGMLEKAAAFPGQLSGGQQQRVGIARGIALEPKVMLFDEPTSALDPELVGSVLQVMR 186 LE+VG+ +KA ++P QLSGGQQQRV IAR +A+ P VMLFDEPTSALDPE+VG VL VM+ Sbjct: 121 LEKVGLADKATSYPSQLSGGQQQRVAIARALAMNPDVMLFDEPTSALDPEMVGEVLSVMK 180 Query: 187 QLREAGMTMLVVTHEMAFARAAADRVVFMDGGVIVEEGPPEQIFGNPQQARTKTFLARL 245 L + GMTM+VVTHEM FAR ADRVVFMD GVI E+G PE++FGNPQ RTK FL ++ Sbjct: 181 SLAKEGMTMVVVTHEMGFAREVADRVVFMDAGVIQEQGTPEEVFGNPQNDRTKDFLGKV 239 >SP0824 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Spn Streptococcus pneumoniae TIGR4 Length = 244 Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 136/239 (56%), Positives = 187/239 (78%) Query: 7 ILEIVGLHKSYEGNTVLRGIDLRVRPGQLICVIGPSGSGKSTMLRCCNRLEEPSAGQIVV 66 +++I LHKS+ N VL+GI+L ++ G+++ +IGPSGSGKST+LR N LEE + G+++ Sbjct: 5 LIKIENLHKSFGKNEVLKGINLEIKRGEVVVIIGPSGSGKSTLLRSMNLLEEATKGKVIF 64 Query: 67 DGVDIMHARADLNAIRQKIGMVFQQFNLYPHMSVLGNVMLALKKVQKHSHAEAERRARRA 126 +GVDI + DL A+R+K+GMVFQQFNL+P+M+V+ N+ L+ K + S A AE+RA+ Sbjct: 65 EGVDITDKKNDLFAMREKMGMVFQQFNLFPNMTVMENITLSPIKTKGDSKAVAEKRAQEL 124 Query: 127 LEQVGMLEKAAAFPGQLSGGQQQRVGIARGIALEPKVMLFDEPTSALDPELVGSVLQVMR 186 LE+VG+ +KA A+P LSGGQQQR+ IARG+A+EP V+LFDEPTSALDPE+VG VL VM+ Sbjct: 125 LEKVGLPDKADAYPQSLSGGQQQRIAIARGLAMEPDVLLFDEPTSALDPEMVGEVLAVMQ 184 Query: 187 QLREAGMTMLVVTHEMAFARAAADRVVFMDGGVIVEEGPPEQIFGNPQQARTKTFLARL 245 L ++GMTM++VTHEM FAR ADRV+FM GV+VE+G PEQIF Q RTK FL+++ Sbjct: 185 DLAKSGMTMVIVTHEMGFAREVADRVIFMADGVVVEDGTPEQIFEQTQGQRTKDFLSKV 243