BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1237.p (1435 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2657 Non COG 607 e-173 XF1126 [S] COG3164 Predicted membrane protein Xfa Xylella fastid... 221 9e-57 STM3369 [S] COG3164 Predicted membrane protein Sty Salmonella ty... 203 2e-51 VC0420 [S] COG3164 Predicted membrane protein Vch Vibrio cholerae 196 4e-49 Z4604 [S] COG3164 Predicted membrane protein EcZ Escherichia col... 190 3e-47 >RSc2657 Non COG Length = 1426 Score = 607 bits (1564), Expect = e-173, Method: Compositional matrix adjust. Identities = 438/1372 (31%), Positives = 653/1372 (47%), Gaps = 86/1372 (6%) Query: 55 FLVLRYAVLPEIGHYKPQIERLVSRQIGRAVSIDDIAASWRGLRPQLSLTNLTVHDQQGE 114 L++R+ + P +G + +ER S + V I + W G P + D G Sbjct: 81 ILLVRFVLWPRVGLAREWMERQASVTLQAKVGIGALETYWEGWHPAFRAQRIEALDAAGR 140 Query: 115 PALRLPRISTTLSWSSLLVAGLRVENLSIEGADLAIRRDAAGKLYVAGIPV--PAGGDGS 172 + + LSW SL + L AD+ +RRDA G L VAGI V AG DG+ Sbjct: 141 RTFAVQDVQARLSWRSLPRLQITFAVLHASQADVLVRRDATGALSVAGIKVEPSAGSDGT 200 Query: 173 SLDWLLSQREIVIRHSKLRWDDELRAAPELVLQDVNLVLHNRWLRHRLSLRAIPPQDMAA 232 D LLSQ +I R +RW D+ PE L +V L L N RHRL A Sbjct: 201 FFDQLLSQGDIDFRDGAVRWLDQQHGLPEAALGNVRLHLRNGPTRHRLDASATSATLFNG 260 Query: 233 PLDVRADFSHPAFARSSDISRWKGLLYADLRNTELAVWRAWIDYPIDIRSGRGSVRAWLT 292 P+ +RADF H AR D W G + LA + ++ G + + Sbjct: 261 PIKLRADFRHDLLARPGDWRHWHGQANWQVDALRLATLQRYLPVLASATGGTLTSDGSVE 320 Query: 293 LDHAKVANFTADLRLTDFNARLSRQLDPLSLKRV-----NGRISASE-----------TL 336 + A L + +L + LDP+ L+ + + R ++ E L Sbjct: 321 FSGGTLTRGQARLTGQQIDLQLRQDLDPIRLRSLQVLGSHQRSASGEHTLRLETLQWLPL 380 Query: 337 GPNLEDGIPTFGTNGHQVTLTDFSIETPDGFVLPP-----TSIAESYEPATPLKAERTSV 391 P +P Q TL ++E P P ++ + + L+ R V Sbjct: 381 SPASPQAVPLPAPA--QATLAGPTLEAPANPAGTPRGLRNVTVGWAVDAHAALR--RLQV 436 Query: 392 KATYLNLLTLSQLATRLPLAPSHRKLLDDLAPRGELRDFTVQWQ---------GSYPELS 442 KA L+L + +AT LPL L P G L D + WQ PE Sbjct: 437 KAATLDLADVRAIATALPLPADVLDPLRSKQPTGRLDDLDINWQRDVSRWRPNSPAPEHY 496 Query: 443 SYRVNGRFQNLGLKGLPAHVEPHRNGVRPARAQWAAFPGFSNLSGEVDATEKGGSVKVDA 502 S R + G LPA V P A PG NLSG V ++ G++++D+ Sbjct: 497 SGHGTLRQVSFGPGPLPA--------VPPGHHPEPAVPGVENLSGNVVFSDDKGTLRIDS 548 Query: 503 RQLAVQLPAELFSEPTMPFDTLKLQARWQFLKDQMLQVDLDQMQFTQPGVAGSLHGQHLV 562 +A+ LP +F E +P D L+ W + Q L V D + F+ ++ + G + Sbjct: 549 ADVALLLPG-VFDESRVPLDRLQGTFTWT-RRQQELVVSSDNLTFSNADLSARITGSYRH 606 Query: 563 PLEGRSMGSVDVSGELSSFDVKAVRRYLPPHLSEPLRHWLTEGLMAGTLKDVQFKLKGAL 622 + +G+VD+ G L V V RYLP L + LR +L+ L GT +V F L G L Sbjct: 607 APDTSHIGAVDLKGTLDQAMVPRVPRYLPLSLPQHLRDYLSGALQTGTASNVTFVLAGDL 666 Query: 623 ADFPFHTAKPGDKPRGQFQLTGEFEGLKLNYTPGHLGRD--GRDPE----WPLLEEGRGR 676 DFP+ +G F++ + + P GR+ G P WP G Sbjct: 667 FDFPYRAPH-----KGSFRVEVPIKDVTYQAAPLEAGRNPPGSVPAHPGGWPSFTGIEGT 721 Query: 677 LSMDRTRLEIKADSARTLGARLGPVTARVADVDSHDAVLEIDGQATGPMPAFLQYVNQSP 736 + D+ L K AR +G L VT + D+ S +L IDG A G FLQYV SP Sbjct: 722 VVFDKPSLSFKVARARVMGVNLTDVTGSLPDMGSAQPLLVIDGHADGATQGFLQYVEASP 781 Query: 737 VARWTGNVMEHTTASGEARLDLKFQMPLHHAIETRAQGTFQFANNDVDLLPELPPLYRTS 796 V W G+ T A G A L LK ++PLH TRAQG+ F +NDV L+P+ PPL + Sbjct: 782 VGEWIGHFTRETRAQGNATLALKLELPLHEMHATRAQGSVGFLHNDVTLIPQAPPLADVT 841 Query: 797 GKVEFNEHGFTLNGVRGQFLGDTLAISGGTQKDGSSQVRLEGAINIDNLRKQYPEPSLQR 856 G + F + G + +R +F G + +GGT DG+ ++++ G + LR P S Sbjct: 842 GTLTFTQRGIGFDNLRARFAGGEIRPTGGTLPDGTIRIQVAGTASAQGLRDTTPADSAVA 901 Query: 857 LLAR-FSGGTRYTATVQVRQHQPEVSIDSNLVGLGVDLPLPLRKGMQDSLPMRFDLLPLA 915 +AR G Y+AT+ V+Q + V + S+L + V LP PL K LP+RF++ P A Sbjct: 902 AVARALDGSAPYSATISVKQRRATVLVQSDLTPMTVRLPAPLAKAAGQPLPVRFEMRPAA 961 Query: 916 SADPLIEREEMRLALGANIAARYVRERVAGKGNDWRVASGGIGWNQPAPTPASGLKLALA 975 + + + +E+ L LG + ARY +R + G + V GGIG QP P PA G+ A+A Sbjct: 962 NGN-AADIDEVLLQLGNVVNARY-EQRSSASGTE--VLRGGIGVRQPVPQPADGVLAAIA 1017 Query: 976 SDSLDVDAWLAL----KTALTGKEAGAGGTSPSRLGSSDVTQYLEPDSISARVGELTLMG 1031 D LD+DAW + A K AG SP+R YL P ++ R L ++G Sbjct: 1018 LDRLDIDAWRQVFAAPAAAAADKSAGTAAASPAR-----GNPYL-PTRLAGRAQALRILG 1071 Query: 1032 KQLNKLVLEAAHRRNAWQINLESQQASGSVTWEDSGSGRGPGKVTARLSTLIIPKSNPAT 1091 + N + ++A+ WQ ++S++ +G+ W + G++T RLS + IP Sbjct: 1072 RDFNAVSVDASRDGANWQSTIDSREIAGTARWHAESATVPFGELTMRLSRMSIP------ 1125 Query: 1092 DATQPTPASAVKADDNVQMPALDIRAEQFELGGKKLGRLELDASNIVTSVGREWRISRLL 1151 DA + + + A + ++P+LD+ A+ F+L GK LGRLEL A + ++ W + L Sbjct: 1126 DAREESALTESLARNTQEIPSLDLVADSFDLRGKPLGRLELKARSQISDGAPVWTLETLK 1185 Query: 1152 LANPDAQFRAAGNWLS----FGSNHTSNFT---YALDIEDAGKLLERFGYPGTIRGGHGK 1204 L P A A G W GS+ T + LD+ ++G+LL++ G+ + G G Sbjct: 1186 LDQPAATLTAQGTWRIPRRLRGSDDPERRTLLDFRLDLRNSGELLQKMGFAKVLDGARGT 1245 Query: 1205 LDGDLSWKAPPYAMDMASLAGQVHMDVHSGQFLKVDPGAAKLLGVLNLQALPRRLTLDFR 1264 L+G + W+ P ++D+ SL G++ +++ GQFL VDPG AKL GVL+LQ L D R Sbjct: 1246 LEGRVVWRGSPMSLDLPSLNGRMALNLERGQFLPVDPGLAKLAGVLSLQGL-LHFATDLR 1304 Query: 1265 DVFSQGFAFDTVAGTASIAKGIASTDNLKMTGVTASVLMSGSADIARETQDLHVVVIPEI 1324 +G F++VA T +IA GIA TD+ + G V M GSA+I ETQDL V V P++ Sbjct: 1305 GATGRGTPFESVAATGTIASGIARTDDFAVKGPQFQVAMQGSANILEETQDLRVTVTPKV 1364 Query: 1325 NLGTASVVAMAVNPVVGVSTLLAQLFLRNPVMKSLSFEYKVTGPWSDPIVVK 1376 + +AS+ A +NP +G+ TL AQL L + + K+ + +Y+VTG W+DP + K Sbjct: 1365 DATSASLAAAFINPAIGLGTLAAQLILGDQMSKAFATQYRVTGSWADPKIEK 1416 >XF1126 [S] COG3164 Predicted membrane protein Xfa Xylella fastidiosa 9a5c Length = 1251 Score = 221 bits (563), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 328/1353 (24%), Positives = 537/1353 (39%), Gaps = 173/1353 (12%) Query: 62 VLPEIGHYKPQIERLVSRQIGRAVSIDDIAASWRGLRPQLSLTNLTVHDQQGEPALRLPR 121 +LP + + Q+ +S + G+ V D + SW P L L + + Q + + Sbjct: 7 LLPVVERHPQQVADWLSVRTGQPVRFDTLNTSWTQRGPLLRLQGVRIGPQ---GRMAIGE 63 Query: 122 ISTTLSWSSLLVAGLRVENLSIEGADLAIRRDAAGKLYVAGIPVPAGGDGSSLDWLLSQR 181 + ++ + L+ G + L + G L + RD+AG+ V G+P GGD L+ L Sbjct: 64 VEVLVAMYTGLLPGHSLIELRLRGMALTVHRDSAGRWSVYGLPRDVGGD--PLEVLRRLG 121 Query: 182 EIVIRHSKLRWDDELRAAPELVLQDVNLVLHNRWLRHRLSLRAIPPQDMAAPLDVRADFS 241 E+ + +L D + L +NL + R R + AP+ DF Sbjct: 122 ELQVIGGRLSVDAP-SSGVSTTLSQINLRVRVAGDRLRAGVHGW-LDSARAPVTGVVDF- 178 Query: 242 HPAFARSSDISRWKGLLYADLRNTELAVWR---AWIDYPIDIRSGRGSVRAWLTL--DHA 296 D G +Y + +LA W A + + +R G G VRAW L H Sbjct: 179 --------DRVSGDGDVYVETLPNQLASWSSLLAGVMRGVHLRDGAGHVRAWAQLHRHHV 230 Query: 297 KVANFTADLRLTDFNA-RLSRQL--------DPLSLKRVNGRISASETLGPNLEDGIPTF 347 + DL+ F RL+ Q +L R + + P L Sbjct: 231 EQVTVQGDLQGVRFEGVRLAGQTVVPRVFWPQLQALVRWQRQGDGWRVVAPRLR-----M 285 Query: 348 GTNGHQVTLTDFSIETPDGFVLPPTSIAESYEPATPLKAERTSVKATYLNLLTLSQLATR 407 G +G ++ DG V+ S Y + P + +V A LA Sbjct: 286 GESGR--------LQKLDGLVVEGGSF---YTVSAPEAVDAGAVMAV---------LALG 325 Query: 408 LPLAPSHRKLLDDLAPRGELRDFTVQWQGSYPELSSYRVNGRFQNLGLKGLPAHVEPHRN 467 LAP R L P+ + VQ Q V GR + LG LP P + Sbjct: 326 DWLAPDLRTWLLRARPQLRVAGLHVQSQAD----GRLWVAGRVEQLGF--LPVVDAPGLS 379 Query: 468 GVRPARAQWAAFPGFSNLSGEVDATEKGGSVKVD-----ARQLAVQLPAELFSEPTMPFD 522 GVR + G V + SV D R+ + L + Sbjct: 380 GVRGTLE--------GDAQGAVLTLDSAASVHFDWPSGFGRRHEIHLAGRIVG------- 424 Query: 523 TLKLQARWQFLKDQMLQVDLDQMQFTQPGVAGSLHGQHLVPLEGRSM-GSVDVSGELSSF 581 W+ + +V ++ SL G + EG M + ++ +L Sbjct: 425 -------WR--QGDGWKVATPALRVQAGDYGASLRGG--LWFEGHGMLPRISLAVQLDDV 473 Query: 582 DVKAVRRY-LPPHLSEPLRHWLTEGLMAGTLKDVQFKLKGALADFPFHTAKPGDKPRGQF 640 V +R+ + +S L WL L+ G+ ++G L D+PF+ G F Sbjct: 474 AVPVAKRFWVRSKMSRELIDWLNAALVNGSTSGGFALIEGELKDWPFNNHD------GYF 527 Query: 641 QLTGEFEGLKLNYTPGHLGRDGRDPEWPLLEEGRGRLSMDRTRLEIKADSARTLGARLGP 700 + G G + + EWP+LE+ ++ IK G Sbjct: 528 EAAGRIHGGVMRF----------QSEWPVLEKLDADIAFIGNGFSIKG-RGELAGVPQVQ 576 Query: 701 VTARVADVDSHDAVLEIDGQATGPMPAFLQYVNQSPVARWTGNVMEHTTASGEARLDLKF 760 + A + D + D L + L + +SP+ + + ++ +ASG A + Sbjct: 577 LEAGIEDFEKGD--LYVRAHVQSDATRLLGLLRRSPLHQHDADTLDSVSASGPASVSFDM 634 Query: 761 QMPLHHAIETRAQGTF--QFANNDVDLLPELPPLY--RTSGKVEFNEHGFTLNG--VRGQ 814 Q+PL H + G F + + +V+ + L G V ++ GF+ G V Q Sbjct: 635 QLPLRHE-QGADYGHFGGEVSLENVNFIHRRWNLAFENVRGPVRYSSDGFSAEGLHVLHQ 693 Query: 815 FLGDTLAISGGTQKDGSSQV---RLEGAINIDNLRKQYPEPSLQRLLARFSGGTRYTATV 871 L L++ G D +Q+ RL ++N+ +L + P+ + L +G +++ + Sbjct: 694 GLEGRLSVRVGDAVDDPAQIFQARLLASVNVKSLLRHAPQ--MDWLRPYVNGISQWRIGI 751 Query: 872 QVRQHQPE-------VSIDSNLVGLGVDLPLPLRKGMQDSLPMRFDL-LPLASADPLIER 923 + + P+ +++DS+LVG ++LP+PL KG LP D+ LP+ E+ Sbjct: 752 DLAKGAPDAHRVFGHLTLDSDLVGTALNLPVPLDKGSGRVLPAHIDVALPM-------EQ 804 Query: 924 EEMRLALGANIAARYVRERVAGKGNDWRVASGGIGWNQPAPTPASGLKLALASDSLDVDA 983 ++ LALG +AAR VR R G+G RV G N GL + S SLD Sbjct: 805 GDIALALGKLVAAR-VRHR-EGEGIGVRVVMGSD--NVRDAPLEHGLVVIGHSTSLDAID 860 Query: 984 WLALKTALTGKEAGAGGTSPSRLGSSDVTQYLEPDSISARVGELTLMGKQL--NKLVLEA 1041 W+ L G S V+ L I +V L L+G + L Sbjct: 861 WMRLVR-----------------GGSAVSSDLPLRLIDLQVDSLLLLGGMFPNTRFQLRP 903 Query: 1042 AHRRNAWQINLESQQASGSVTWEDSGSGRGPGKVTARLSTLIIPKSNPATDATQPTPASA 1101 H+ A + ++ SG + +S G VT L L + + + SA Sbjct: 904 VHQGVA--VAVDGPALSGQLNVPESID----GTVTGSLGVLHWQAAQAPSVKVSGSVQSA 957 Query: 1102 VKADDNVQMPALDIRAEQFELGGKKLGRLELDASNIVTSVGREWRISRLLLANPDAQFRA 1161 + D +P+L E + G K GR+EL ++ + ++ +L +P + Sbjct: 958 MVDVDPASIPSLAFEVEDAKFGQVKFGRMELRTRHMSDGM----QVDQLQTNSPSQRLSM 1013 Query: 1162 AGNWLSFGSNHTSNFTYALDIEDAGKLLERFGYPGTIRGGHGKLDGDLSWKAPPYAMDMA 1221 W G + + +D D G+L + GY +RGG G++ W PP +A Sbjct: 1014 FATWRGKGEAASIRLSARVDSRDLGELAQAIGYGEQLRGGEGQIQLSAGWNGPPVGFQLA 1073 Query: 1222 SLAGQVHMDVHSGQFLKVDPGAAKLLGVLNLQALPRRLTLDFRDVFSQGFAFDTVAGTAS 1281 SL+G + + +GQ L++ PGA ++LG+L++ LPRRL LDFRD+FS+G AF+ G Sbjct: 1074 SLSGDLKVTARNGQLLELKPGAGRVLGLLSVTQLPRRLMLDFRDLFSKGLAFNRFYGEVH 1133 Query: 1282 IAKGIASTDNLKMTGVTASVLMSGSADIARETQDLHVVVIPEINLGTASVVAMAVNPVVG 1341 G A D LK+ G ++ + G +D++ +T D V V P+ V A+A PV Sbjct: 1134 FGDGQARADGLKIEGPAVNIAIRGQSDLSTQTFDQIVDVNPKSGNLLTVVGAVAGGPVGA 1193 Query: 1342 VSTLLAQLFLRNPVMKSLSFEYKVTGPWSDPIV 1374 A + L P+ + Y V+GPW+DP V Sbjct: 1194 AVGAAANMVLGKPLGAIGAKTYHVSGPWNDPKV 1226 >STM3369 [S] COG3164 Predicted membrane protein Sty Salmonella typhimurium LT2 Length = 1266 Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 314/1393 (22%), Positives = 537/1393 (38%), Gaps = 183/1393 (13%) Query: 43 LLLVAYFVFCALFLV--LRYAVLPEIGHYKPQIERLVSRQIGRAVSIDDIAASWRGLRPQ 100 LL A + A LV LR A LP + ++P I + G V+ ++ASW+ P Sbjct: 9 LLTGAALIVIAALLVSGLRLA-LPHLDAWRPAILNKIESVTGVPVAASQLSASWQNFGPT 67 Query: 101 LSLTNLTVHDQQGEPALRLPRISTTLS-WSSLLVAGLRVENLSIEGADLAIRRDAAGKLY 159 L N+ + G L + R++ L W SLL + +L+ + + Sbjct: 68 LEAHNIHAALKDGG-ELSIKRVTLALDVWQSLLHMRWQFRDLTFWQLN-----------F 115 Query: 160 VAGIPVPAGGDGSSL------DWLLSQRE-IVIRHSKLRWDDELRAAPELVLQDVNLVLH 212 P+ + DG + D L Q + +R S++ + EL + + + Sbjct: 116 RTNTPLQSS-DGEGIETSRLSDLFLRQFDHFDLRDSQISFLTLSGQRAELAIPQLTWL-- 172 Query: 213 NRWLRHR----LSLRAIPPQDMAAPLDVRADFSHPAFARSSDISRWKGLLYADLRNTELA 268 N RHR +SL ++ Q + VR D R D G ++ + ++ Sbjct: 173 NGKERHRAEGEVSLSSLTGQH--GVMQVRMDL------RDDDGLLNNGRVWLQADDIDVK 224 Query: 269 VWRA-WIDYPIDIRSGRGSVRAWLTLDHAKVANFTADLRLTDFNARLSRQLDPLSLKRVN 327 W W+ + +++ R S+ W+TL ++A L+ + LS+ + Sbjct: 225 PWLGKWMQDNVALQTARFSLEGWMTLSKGEIAGGDVWLKQGGASWLGDNTTHTLSVDNLT 284 Query: 328 GRISASETLGPNLEDGIPTFGTNGHQVTLTDFSIETPDGFVLPPTSIAESYEPATPLKAE 387 +IS + G Q + D I T DG P ++ ++ P + E Sbjct: 285 AQISREQP---------------GWQFYIPDTRI-TLDGKPWPSGALTVAWLPQQDVGGE 328 Query: 388 RTS------VKATYLNLLTLSQLATRLPLAPSHRKLLDDLAPRGELRDFTVQWQGSYPEL 441 + ++A+ L L L L PLA +L ++ WQ + P Sbjct: 329 NHTRSDELRIRASNLELAGLEALR---PLAAKLSPVLGEI------------WQATQP-- 371 Query: 442 SSYRVNGRFQNLGLKGLPAHVEPHR---NGVRPARAQWAAFPGFSNLSGEVDATEKGGSV 498 +G+ L L E R + A QW PG + SG + + + G + Sbjct: 372 -----SGKIATLALDIPLQATEKTRFQASWENLAWKQWKLLPGAEHFSGTLAGSVEDGQM 426 Query: 499 KVDARQLAVQLPAELFSEPTMPFDTLKLQARWQFLKDQM-LQVDLDQMQFTQPGVAGSLH 557 KV +Q ++P E P + A +LK++ Q+D + V Sbjct: 427 KVAMQQ--AKMPYETVFR--APLEIENGVATLSWLKNENGFQLDGRDIDVKAKAVHARGG 482 Query: 558 GQHLVPLEGRSMGSVDVSGELSSFDVKAVRRYLPPHL-SEPLRHWLTEGLMAGTLKDVQF 616 ++L P + + +S+ D RY P +L + L +L+ + G + Sbjct: 483 FRYLQPTGDEPW--LGILAGISTDDGSQAWRYFPENLMGKALVDYLSGAIQGGEADNATL 540 Query: 617 KLKGALADFPFHTAKPGDKPRGQFQLTGEFEGLKLNYTPGHLGRDGRDPEWPLLEEGRGR 676 G FP+ + GQF++ + P+WP L+ Sbjct: 541 VYGGNPHLFPYKHNE------GQFEVLVPLRNATFAF----------QPDWPALKNLNIE 584 Query: 677 LSMDRTRLEIKADSARTLGARLGPVTARVADVDSHDAVLEIDGQATGPMPAFLQYVNQSP 736 L L +++DS G + + A + D L ID GP A Y +++P Sbjct: 585 LDFLNDGLWMRSDSVDLGGVKASKLAAAIPDYSKEK--LLIDADINGPGKAVGPYFDETP 642 Query: 737 VARWTGNVMEHTTASGEARLDLKFQMPLHHAIETRAQGTFQFANNDVDLLPELPPLYRTS 796 + G+ + G+ L +PL + A+G NN + + P L + Sbjct: 643 LKDSLGSTLAELQLDGDVNARLHLDIPLDGE-QVTAEGDVSLRNNSLFIKPLNSTLKNLN 701 Query: 797 GKVEFNEHGFTLNGVRGQFLGDTLAISGGTQKDGSS-QVRLEGAINIDNLRKQYPEPSLQ 855 GK F + + L + T + + QV + N R P L Sbjct: 702 GKFSFVNGALKSGPLTANWFNQPLNLDFSTTEGAKAYQVAVNLNGNWQPTRMGVLPPQLN 761 Query: 856 RLLARFSGGTRYTATVQVR-----QHQPEVSIDSNLVGLGVDLPLPLRKGMQDSLPMRFD 910 L SG + V + + ++ +L + LP PL K +++P+ Sbjct: 762 DAL---SGSVTWNGKVGIDLPYHADTTYHIELNGDLRNVSSHLPSPLNKPAGEAIPVNI- 817 Query: 911 LLPLASADPLIEREEMRLALGA--NIAARY-VRERVAGKGNDWRVASGGIGWNQPAPTPA 967 AD ++ + + G+ + +R+ + +++ W S I P PA Sbjct: 818 -----QADGNLKSFALTGSAGSKNHFNSRWLLNQKLTLDRAIWTTDSRTI-----PPLPA 867 Query: 968 -SGLKLALASDSLDVDAWLALKTALTGKEAGAGGTSPSRLGSSDVTQYLEPDSISARVGE 1026 G++L L +LD WLAL + P R ++ R Sbjct: 868 QQGVELNLP--ALDGAQWLALFQKGAADNVSSSAEFPQR--------------VTLRTPA 911 Query: 1027 LTLMGKQLNKLVLEAAHRRNAWQINLESQQASGSVTWEDSGSGRGPGKVTARLSTLIIPK 1086 L+L G+Q N L + +A N +I + ++ + ++ R A + L Sbjct: 912 LSLGGQQWNNLSVVSAPSLNGTKIEAQGREVNATLL------MRNHAPWLANIKYLYYNP 965 Query: 1087 SNPATDATQPTPASAVKADDNVQM---PALDIRAEQFELGGKKLGRLELDASNIVTSVGR 1143 T A+ PTP S + + + + P L +R E+ L G+K GR++ D G Sbjct: 966 GVAKTHASSPTPTSPLASANTISFRGWPDLQLRCEECWLWGQKYGRIDGD----FAIKGN 1021 Query: 1144 EWRISRLLLANPDAQFRAAGNWLSFGSNHTSNFTYALDIEDAGKLLERFGYPGTIRGGHG 1203 ++ L+ A+ +A G W++ N ++ +L + FG I+ Sbjct: 1022 TLTLANGLIDTGFARLKANGEWVNAPGNERTSLKGSLHGSNLDTAAGFFGISTPIQNASF 1081 Query: 1204 KLDGDLSWKAPPYAMDMASLAGQVHMDVHSGQFLKVDPG-AAKLLGVLNLQALPRRLTLD 1262 +D DL W+ PP+ D A+L G + + G+F + G A +LL +L+ AL R+L D Sbjct: 1082 NVDYDLHWRNPPWQPDEATLNGILRTRLGKGEFTDLSSGHAGQLLRLLSFDALLRKLRFD 1141 Query: 1263 FRDVFSQGFAFDTVAGTASIAKGIASTDNLKMTGVTASVLMSGSADIARETQDLHVVVIP 1322 FRD FS+GF FD++ TA I G+ TD+ + G+ A + M GS D+ R D+ VV P Sbjct: 1142 FRDTFSEGFYFDSIHSTAWIKDGVLHTDDTLVDGLEADIAMKGSVDLVRRRLDMEAVVAP 1201 Query: 1323 EINLGTASVVAMAVNPVVGVSTLLAQLFLRNPVMKSLSFEYKVTGP-WSDPIVVKQGQVS 1381 EI+ A AVNP+VG + A KV GP WS +++ Sbjct: 1202 EISATVGVAAAFAVNPIVGAAVFAAS---------------KVLGPLWSKVSILRYRITG 1246 Query: 1382 PVDAERAKEVLQK 1394 PVDA + EVL++ Sbjct: 1247 PVDAPQINEVLRQ 1259 >VC0420 [S] COG3164 Predicted membrane protein Vch Vibrio cholerae Length = 1291 Score = 196 bits (497), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 258/1122 (22%), Positives = 455/1122 (40%), Gaps = 129/1122 (11%) Query: 280 IRSGRGSVRAWLTLDHAKVANFTADLRLTDFNARLSRQLDPLSLKRVNGRISASETLGPN 339 I+ G+ S+ AW TL+H + + + + P L NG + L Sbjct: 251 IQKGQVSLNAWATLEHNQPKDGYVEFK-------------PSELVWQNGEQTHELLLESG 297 Query: 340 LEDGIPTFGTNGHQVTLTDFSIETPDGFVLPPTSIAESYEPATPLKAERTSVKATYLNLL 399 + + PT G QV + + D + P +A ++P + + + LN+ Sbjct: 298 IVELKPT--EKGWQVNAHSLRLRSDDE-LWPLLDVAMDWQP------DEWRLNLSQLNIE 348 Query: 400 TLSQLATRLPLAPSHRKLLDDLAPRGELRDFTVQWQGSYPELSSYRVNGRFQNLGLKGLP 459 L LA +P + + L L P+G L D + L S R + + G+ Sbjct: 349 NLLPLAKLIPESQTLNHWLTTLKPKGTLEDVRI---AKGATLESLRYSASLIDGGI---- 401 Query: 460 AHVEPHRNGVRPARAQWAAFPGFSNLSGEVDATEKGGSVKVDARQLAVQLP-AELFSEPT 518 AQW P + L ++ + +K A + LP E+F P Sbjct: 402 --------------AQWELLPQVNALQAQIQGSPSKALIK--ASMVDDVLPYGEVFQAP- 444 Query: 519 MPFDTLKLQARWQFLKDQM-LQVDLDQMQFTQPGVAGSLHGQHLVPLEGRSMGSVDVSGE 577 + + WQ ++Q + D++ P + G + + + E Sbjct: 445 LNIRQGAVNLVWQ--QEQYGWSLWSDKVTVATPDLQA--LGAFRLDFPDDASPFLSFYAE 500 Query: 578 LSSFDVKAVRRYLPP-HLSEPLRHWLTEGLMAGTLKDVQFKLKGALADFPFHTAKPGDKP 636 F+ RYLP L L +L+ + AG + + GAL FP+ Sbjct: 501 ADLFNAGETWRYLPTLALGRELTDYLSTAIQAGQVNTAKLIWYGALDQFPYRMHN----- 555 Query: 637 RGQFQLTGEFEGLKLNYTPGHLGRDGRDPEWPLLEEGRGRLSMDRTRLEIKADSARTLGA 696 G FQ + GLK + D WP + + + L + + + + SA + Sbjct: 556 -GVFQ---AWVGLKE-------AKFAFDTAWPPITDLQLDLLFENDAMYLDSRSATLMEV 604 Query: 697 RLGPVTARVADVDSHDAVLEIDGQATGPM-PAFLQYVNQSPVARWTGNVMEHTTASGEAR 755 +T R+ ++ + +EI+ A+ A Y+ +P+ G + G R Sbjct: 605 SAERITGRIPEL-AELGHIEIEAVASAQQGNAIRNYMMATPLVDSVGAALTTIQVKGPVR 663 Query: 756 LDLKFQMPLHHAIETRAQGTFQFANNDVDLLPELPPLYRTS--GKVEFNEHGFTLNGVRG 813 + + +P H E RA G + +NN VD+ + PP+ TS GK+EF+ + G+ Sbjct: 664 SEFQLNIPFHSGAEPRAWGFAELSNNAVDI--DTPPMSLTSVSGKIEFDNDRVSAAGLDA 721 Query: 814 QFLGDTLAI--SGGTQKDGSSQVRLEGAINIDNLRKQYPEPSL----QRLLARFSGGTRY 867 + L ++I G K G A+ ID + +P + +R L+R G + Sbjct: 722 RLLKQPVSIDFKGEDAKRGY-------AVGIDMVGDWEVKPLIPFVGERWLSRVKGHAPW 774 Query: 868 TATVQVRQHQP----EVSIDSNLVGLGVDLPLPLRKGMQDSLPMRFDLLPLASADPLIER 923 A+V ++ + ++ ++L GL P PL+K +L ++ L AS + E Sbjct: 775 QASVDIQLNDVGFTYQLDGKADLRGLESRYPFPLKK----ALKVKGQALLQASGNQ--EM 828 Query: 924 EEMRLALGANIAARYVRE-RVAGKGNDWRVASGGIGWNQPAPTPASGLKLALASDSLDVD 982 RL L A+Y E + K + + +G +P G + L S + ++D Sbjct: 829 VSARLQLPQ---AKYQAEIDLTPKVPVLKATNLVLGQGSFKISPVVGHHVQLRSQAFNLD 885 Query: 983 AWLALKTALTGKEAGAGGTSPSRLGSSDVTQYLEPDSISARVGELTLMGKQLNKLVLEAA 1042 WL++ E A + S+L S + + P+ + A V ELT G + + L A Sbjct: 886 DWLSILN-----EKPAPKSRKSKLASLNTPAFPMPERVDAAVKELTFAGLDWHDVDLNAR 940 Query: 1043 HRRNAWQINLESQQASGSVTWEDSGSGRGPGKVTARLSTL--IIPKSNPATDAT------ 1094 + W +NL+SQ+ G + + P ++ L L +P+ +A Sbjct: 941 RKDLGWLLNLDSQEIKGQANYIE------PYDLSIALERLHLFLPQLEAGEEALLVDLDR 994 Query: 1095 QPTP-ASAVKADDNVQMPALDIRAEQFELGGKKLGRLELDASNIVTSVGREWRISRLLLA 1153 Q P + + MP L + + F L G K+G+ +D G + Sbjct: 995 QKLPLITDFDRKFHQWMPNLTLTIKDFWLQGYKIGQANVD----FQRQGDTLLWKSIDFT 1050 Query: 1154 NPDAQFRAAGNWLSFGSNHTSNFTYALDIEDAGKLLERFGYPGTIRGGHGKLDGDLSWKA 1213 + Q G W + + + ++ L+ RFG I+ ++ W Sbjct: 1051 SGTNQLHVNGTWTLTDTQSRTQMNLDMKGDNNSDLMARFGINSGIQRAPFEITASTQWDG 1110 Query: 1214 PPYAMDMASLAGQVHMDVHSGQFLKVDPGAAKLLGVLNLQALPRRLTLDFRDVFSQGFAF 1273 P++M + +L G+V + G V GAA+LLG+ +L ++ R++ LDF DVF +G AF Sbjct: 1111 APWSMQVNTLQGKVDTKLGKGVISDVS-GAARLLGLFSLDSIIRKMQLDFSDVFDKGMAF 1169 Query: 1274 DTVAGTASIAKGIASTDNLKMTGVTASVLMSGSADIARETQDLHVVVIPEINLGTASVVA 1333 D+++G+ +++GI T+N+KM V + + G AD+ T D V +P+I G + A Sbjct: 1170 DSISGSGELSQGIFVTNNIKMDAVAGEMTIKGLADLNTRTVDAEVNFVPDITSGIPVLTA 1229 Query: 1334 MAVNPVVGVSTLLAQLFLRNPVMKSLS-FEYKVTGPWSDPIV 1374 AV P + +LA + +PV++ + Y+V GP P V Sbjct: 1230 FAVTPQTAL-YVLAITTVISPVVEVFTQVNYEVKGPLDSPTV 1270 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 37/73 (50%) Query: 37 LGFTLKLLLVAYFVFCALFLVLRYAVLPEIGHYKPQIERLVSRQIGRAVSIDDIAASWRG 96 LG L LLV+ + AL + +LP++ ++ +I+ +++ V+I D+ WR Sbjct: 8 LGRILMWLLVSLLIVLALAVTALRILLPQMNRFQAEIQHWLNQNSSVQVAIADVQGYWRN 67 Query: 97 LRPQLSLTNLTVH 109 P LSL L H Sbjct: 68 THPSLSLQTLQAH 80 >Z4604 [S] COG3164 Predicted membrane protein EcZ Escherichia coli O157:H7 EDL933 Length = 1266 Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 306/1379 (22%), Positives = 529/1379 (38%), Gaps = 181/1379 (13%) Query: 43 LLLVAYFVFCALFLV--LRYAVLPEIGHYKPQIERLVSRQIGRAVSIDDIAASWRGLRPQ 100 LL A V A LV LR A LP + ++P+I + G V ++ASW+ P Sbjct: 9 LLTGAALVVIAALLVSGLRIA-LPHLDAWRPEILNKIESATGMPVEASQLSASWQNFGPT 67 Query: 101 LSLTNLTVHDQQGEPALRLPRISTTLS-WSSLLVAGLRVENLSIEGADLAIRRDAAGKLY 159 L ++ + G + R++ L W SLL + +L+ L R + Sbjct: 68 LEAHDIRAELKDGG-EFSVKRVTLALDVWQSLLHMRWQFRDLTF--WQLRFRTNT----- 119 Query: 160 VAGIPVPAGGDGSSL------DWLLSQRE-IVIRHSKLRWDDELRAAPELVLQDVNLVLH 212 P+ +GG SL D L Q + +R S++ + EL + + + Sbjct: 120 ----PITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLND 175 Query: 213 NRWLRHR----LSLRAIPPQD--MAAPLDVRADFSHPAFARSSDISRWKGLLYADLRNTE 266 R RHR +SL ++ Q M +D+R D +S + L AD + + Sbjct: 176 PR--RHRAEGLVSLSSLTGQHGVMQVRMDLRDD--------EGLLSNGRVWLQAD--DID 223 Query: 267 LAVWRA-WIDYPIDIRSGRGSVRAWLTLDHAKVANFTADLRLTDFNARLSRQLDPLSLKR 325 L W W+ I + + + S+ W+T+D V L+ + ++ LS+ Sbjct: 224 LKPWLGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDN 283 Query: 326 VNGRISASETLGPNLEDGIPTFGTNGHQVTLTDFSIETPDGFVLPPTSIAESYEPATPL- 384 + I+ G Q ++ D I T DG P ++ ++ P + Sbjct: 284 LTAHITRENP---------------GWQFSIPDTRI-TMDGKPWPSGALTLAWIPEQDVG 327 Query: 385 -----KAERTSVKATYLNLLTLSQLATRLPLAPSHRKLLDDLAPRGELRDFTVQWQGSYP 439 +++ ++A+ L L L + PLA L D+ W+ + P Sbjct: 328 GKDNKRSDELRIRASNLELAGLEGIR---PLAAKLSPALGDV------------WRSTQP 372 Query: 440 ELSSYRVNGRFQNLGLKGLPAHVEPHRNGVRPARAQWAAFPGFSNLSGEVDATEKGGSVK 499 S ++N ++ L+ + A QW PG + SG + + + G + Sbjct: 373 ---SGKINTLALDIPLQA-ADKTRFQASWSDLAWKQWKLLPGAEHFSGTLSGSVENGLLT 428 Query: 500 VDARQLAVQLPAELFSEPTMPFDTLKLQARWQFL-KDQMLQVDLDQMQFTQPGVAGSLHG 558 +Q ++P E P + QA +L D+ Q+D + V Sbjct: 429 ASMKQ--AKMPYETVFR--APLEIADGQATISWLNNDKGFQLDGRNIDVKAKAVHARGGF 484 Query: 559 QHLVPLEGRSMGSVDVSGELSSFDVKAVRRYLPPHL-SEPLRHWLTEGLMAGTLKDVQFK 617 ++L P + + +S+ D RY P +L + L +L+ + G + Sbjct: 485 RYLQPANDEPW--LGILAGISTDDGSQAWRYFPENLMGKDLVDYLSGAIQGGEADNATLV 542 Query: 618 LKGALADFPFHTAKPGDKPRGQFQLTGEFEGLKLNYTPGHLGRDGRDPEWPLLEEGRGRL 677 G FP+ + GQF++ K + P+WP L L Sbjct: 543 YGGNPQLFPYKHNE------GQFEVLVPLRNAKFAF----------QPDWPALTNLGIEL 586 Query: 678 SMDRTRLEIKADSARTLGARLGPVTARVADVDSHDAVLEIDGQATGPMPAFLQYVNQSPV 737 L +K D G R +TA + D L ID GP A Y +++P+ Sbjct: 587 DFINDGLWMKTDGVNLGGVRASNLTAVIPDYSKEK--LLIDADIKGPGKAVGPYFDETPL 644 Query: 738 ARWTGNVMEHTTASGEARLDLKFQMPLHHAIETRAQGTFQFANNDVDLLPELPPLYRTSG 797 G ++ G+ L +PL+ + T A+G NN + + P L SG Sbjct: 645 KDSLGATLQELQLDGDVNARLHLDIPLNGELVT-AKGEVTLRNNSLFIKPLDSTLKNLSG 703 Query: 798 KVEFNEHGFTLNGVRGQFLGDTLAISGGTQKDGSSQVRLEGAINIDNLRKQYPEPSLQRL 857 K F + + L + T K+G+ ++ A+N++ + L Sbjct: 704 KFSFINGDLQSEPLTASWFNQPLNVDFST-KEGAKAYQV--AVNLNGNWQPAKTGVLPAA 760 Query: 858 LAR-FSGGTRYTATVQV-----RQHQPEVSIDSNLVGLGVDLPLPLRKGMQDSLPMR--- 908 + SG + V + V ++ +L + LP PL K + LP+ Sbjct: 761 VNEALSGSVAWDGKVGIVLPYHAGATYNVELNGDLKNVSSHLPSPLAKPAGEPLPVNVKV 820 Query: 909 ------FDLLPLASADPLIEREEMRLALGANIAARYVRERVAGKGNDWRVASGGIGWNQP 962 F+L A AD R LG + +R W S + P Sbjct: 821 DGNLNSFELTGQAGAD---NHFNSRWLLG----QKLTLDRAI-----WAADSKTL----P 864 Query: 963 APTPASGLKLALASDSLDVDAWLALKTALTGKEAGAGGTSPSRLGSSDVTQYLEPDSISA 1022 SG++L + ++ WLAL + G + P I+ Sbjct: 865 PLPEQSGVELNMP--PMNGAEWLALFQKGAAESVGGAASFPQH--------------ITL 908 Query: 1023 RVGELTLMGKQLNKLVLEAAHRRNAWQINLESQQASGSVTWEDSGSGRGPGKVTARLSTL 1082 R L+L +Q N L + + N Q+ + ++ + ++ ++ L+ + Sbjct: 909 RTPMLSLGNQQWNNLSIVSQPTANGTQVEAQGREINATLAMRNNA---------PWLANI 959 Query: 1083 IIPKSNPATDATQ--PTPASAVKADDNVQMPALD---IRAEQFELGGKKLGRLELDASNI 1137 NP+ T+ TP+S + + IR + G+K GR++ D Sbjct: 960 KYLYYNPSVAKTRGDSTPSSPFPTTERINFRGWSDAQIRCAECWFWGQKFGRIDSD---- 1015 Query: 1138 VTSVGREWRISRLLLANPDAQFRAAGNWLSFGSNHTSNFTYALDIEDAGKLLERFGYPGT 1197 +T G ++ L+ ++ A G W++ N ++ L + E FG Sbjct: 1016 ITISGNTLTLTNGLIDTGFSRLTADGEWINNPGNERTSLKGKLRGQKIDAAAEFFGVTTP 1075 Query: 1198 IRGGHGKLDGDLSWKAPPYAMDMASLAGQVHMDVHSGQFLKVDPG-AAKLLGVLNLQALP 1256 IR +D DL W+ P+ D A+L G +H + G+ +++ G A +LL +L++ AL Sbjct: 1076 IRQSSFNVDYDLHWRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALM 1135 Query: 1257 RRLTLDFRDVFSQGFAFDTVAGTASIAKGIASTDNLKMTGVTASVLMSGSADIARETQDL 1316 R+L DFRD F +GF FD++ TA I G+ TD+ + G+ A + M GS ++ R ++ Sbjct: 1136 RKLRFDFRDTFGEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNM 1195 Query: 1317 HVVVIPEINLGTASVVAMAVNPVVGVSTLLAQLFLRNPVMKSLS-FEYKVTGPWSDPIV 1374 VV PEI+ A AVNP+VG + A L P+ +S Y ++GP DP + Sbjct: 1196 EAVVAPEISATVGVAAAFAVNPIVGAAVFAASKVL-GPLWSKVSILRYHISGPLDDPQI 1253