BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1206.p         (153 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2494 [S] COG1430 Uncharacterized conserved protein Rso Ralsto...   154   1e-37
SMc00288 [S] COG1430 Uncharacterized conserved protein Sme Sinor...    88   8e-18
TM1668 [S] COG1430 Uncharacterized conserved protein Tma Thermot...    85   6e-17
AGc3316 [S] COG1430 Uncharacterized conserved protein Atu Agroba...    84   8e-17
TP0087 [S] COG1430 Uncharacterized conserved protein Tpa Trepone...    82   6e-16

>RSc2494 [S] COG1430 Uncharacterized conserved protein Rso Ralstonia
           solanacearum
          Length = 150

 Score =  154 bits (388), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/152 (50%), Positives = 97/152 (63%), Gaps = 6/152 (3%)

Query: 4   SSLSRFFMTSAAALLAAGCLCSASAQTPQVRK--FPTTQLNIGIHLIKAEVAQTEAEREQ 61
           ++LSR     + A+ A G L    AQTP       PT  L IG++ +  EVA T+  RE 
Sbjct: 2   TTLSRLLAGLSLAVAATGAL----AQTPTGPNTGLPTVDLTIGMYKVHTEVAATQPARET 57

Query: 62  GLMFREKMGDNEGMLFLFGQPAGVCMWMKNTLIPLSVAFMDEKGFIINIEEMKEQTLDSH 121
           GLMFR+ M D  GMLF+F + A  C WMKNT +PLS+AF+D+ G I +I EMK QT D+H
Sbjct: 58  GLMFRKSMPDTAGMLFVFDESARHCFWMKNTDLPLSIAFIDDNGVITDIAEMKPQTEDNH 117

Query: 122 CAKRAAVYALEMNKGWFKQKNIKPGSKVEGLP 153
           C  R  +YALEMNKGWF +K IK G+KV  LP
Sbjct: 118 CPTRPGLYALEMNKGWFTRKGIKVGTKVGSLP 149


>SMc00288 [S] COG1430 Uncharacterized conserved protein Sme Sinorhizobium
           meliloti
          Length = 163

 Score = 87.8 bits (216), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 7/110 (6%)

Query: 46  HLIKAEVAQTEAEREQGLMFREKMGDNEGMLFLFGQPAGVCMWMKNTLIPLSVAFMDEKG 105
           H +  E+A   ++REQGLM+R +M  + GMLF FG+   V MWMKNT +PL + F+   G
Sbjct: 47  HDLTVELAVDPSQREQGLMYRRQMAPDHGMLFDFGETRPVMMWMKNTYLPLDMLFIASDG 106

Query: 106 FIINIEE----MKEQTLDSHCAKRAAVYALEMNKGWFKQKNIKPGSKVEG 151
            I  I E      E  +DS   +    Y LE+N G  K+  + PG ++EG
Sbjct: 107 TIRTIHENAVPHSEAIIDS---REPVAYVLELNAGTVKRLGVSPGDRLEG 153


>TM1668 [S] COG1430 Uncharacterized conserved protein Tma Thermotoga
           maritima
          Length = 163

 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 8/130 (6%)

Query: 27  SAQTPQVRKFPTTQLNI--GIHLIK--AEVAQTEAEREQGLMFREKMGDNEGMLFLFGQP 82
           S Q+ +V KFP  ++ I  G   +K   E+A T A R  GLM+R+ + D+ GMLF+F + 
Sbjct: 31  SGQSDRV-KFPKGRIVITDGEKSLKLDVEIANTPALRSIGLMYRKSIPDDFGMLFVFEED 89

Query: 83  AGVCMWMKNTLIPLSVAFMDEKGFIINIEEM---KEQTLDSHCAKRAAVYALEMNKGWFK 139
                WMKNT +PL +AF+D+ G I +I+EM   KE+    + A     YALE+ KG+F+
Sbjct: 90  TCSGFWMKNTYVPLEIAFIDKNGVIFSIQEMEPCKEEPCKIYYAPGPFRYALEVKKGFFE 149

Query: 140 QKNIKPGSKV 149
           +     GS+V
Sbjct: 150 RHRFGVGSRV 159


>AGc3316 [S] COG1430 Uncharacterized conserved protein Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 161

 Score = 84.3 bits (207), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 1/101 (0%)

Query: 50  AEVAQTEAEREQGLMFREKMGDNEGMLFLFGQPAGVCMWMKNTLIPLSVAFMDEKGFIIN 109
           AE+A  +A+R QGLMFR+ M    GMLF FG+   V MWM+NTLIPL + F+   G I +
Sbjct: 52  AELALDDAQRSQGLMFRKSMPPENGMLFDFGETRAVAMWMRNTLIPLDMLFIAGDGRITH 111

Query: 110 IEEMKEQTLDSHCAKRAAV-YALEMNKGWFKQKNIKPGSKV 149
           I E      ++  + R  V + LE+N G  K+  IKPG  V
Sbjct: 112 IHENAVPHSEAIISSRGPVKFVLELNGGAAKRYGIKPGDMV 152


>TP0087 [S] COG1430 Uncharacterized conserved protein Tpa Treponema
           pallidum
          Length = 179

 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 63/102 (61%)

Query: 48  IKAEVAQTEAEREQGLMFREKMGDNEGMLFLFGQPAGVCMWMKNTLIPLSVAFMDEKGFI 107
           +  E+A TE  + +G M R ++ D  GMLF++ Q   +  WMK+T  PLS+AF+D +G I
Sbjct: 54  VVVELALTEEAQRRGYMGRTRIPDGTGMLFVYKQDTRLSFWMKDTPHPLSLAFLDAQGAI 113

Query: 108 INIEEMKEQTLDSHCAKRAAVYALEMNKGWFKQKNIKPGSKV 149
           + IE++   +  S  + R+  YALE+ +GWF +  +  G+++
Sbjct: 114 VQIEDLVPLSTHSVRSNRSVRYALEVPRGWFVRSKLLVGARL 155