BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1191.p (1077 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1521 [EF] COG0458 Carbamoylphosphate synthase large subunit (... 1807 0.0 NMB1855 [EF] COG0458 Carbamoylphosphate synthase large subunit (... 1617 0.0 PM1505 [EF] COG0458 Carbamoylphosphate synthase large subunit (s... 1617 0.0 NMA0602 [EF] COG0458 Carbamoylphosphate synthase large subunit (... 1615 0.0 PA4756 [EF] COG0458 Carbamoylphosphate synthase large subunit (s... 1576 0.0 >RSc1521 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) Rso Ralstonia solanacearum Length = 1081 Score = 1807 bits (4681), Expect = 0.0, Method: Compositional matrix adjust. Identities = 881/1086 (81%), Positives = 977/1086 (89%), Gaps = 15/1086 (1%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTDIK+ILIIGAGPIIIGQACEFDYSGAQACKALREEGFKV+LVNSNPATIMTDP Sbjct: 1 MPKRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVVLVNSNPATIMTDPST 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 AD TYIEPITW+ VERIIAKE+PDAILPTMGGQTALNCALDLHRHGVLEKY VELIGA+P Sbjct: 61 ADVTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLEKYNVELIGASP 120 Query: 121 EAIDKAEDRSKFKEAMTKIGLGSARSGVSHTMEESWAVQKTI-------GFPVIIRPSFT 173 EAIDKAEDR KFKEAMTKIGLGSA+SG++H++EE+ AVQ I G+P++IRPSFT Sbjct: 121 EAIDKAEDRQKFKEAMTKIGLGSAKSGIAHSLEEALAVQAQIARETSSGGYPIVIRPSFT 180 Query: 174 MGGTGGGIAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCS 233 +GGTGGGIAYN EEFE ICKRGL+ SPT+ELLIEESL+GWKEYEMEVVRDK DNCIIVCS Sbjct: 181 LGGTGGGIAYNREEFEDICKRGLDLSPTNELLIEESLLGWKEYEMEVVRDKKDNCIIVCS 240 Query: 234 IENLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADG 293 IENLDPMG+HTGDSITVAPAQTLTDKEYQI+RNASLAVLREIGVDTGGSNVQFS+NP DG Sbjct: 241 IENLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPEDG 300 Query: 294 RMIVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSID 353 RMIVIEMNPRVSRSSALASKATGFPIAK+AAKLAVG+TLDEL+NEITGGATPASFEPSID Sbjct: 301 RMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSID 360 Query: 354 YVVTKIPRFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKT 413 YVVTK+PRF FEKFPQAD HLTTQMKSVGEVMA+GRTFQESFQKALRGLEVGVDG++EK+ Sbjct: 361 YVVTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLDEKS 420 Query: 414 TDRELIEKELGEPGPDRIWYVGDAFAQGFSLEEVHNLTHIDPWFLSQIKEIVDIELWLEK 473 +DR+ I E+GEPGPDRIWY+GDAF G S++EV+ T +DPWFL+QI++IV E L K Sbjct: 421 SDRDEIIAEIGEPGPDRIWYLGDAFRLGLSIDEVYAETAVDPWFLAQIEDIVRTEA-LVK 479 Query: 474 EVALESLDKATLFQLKQKGFSDRRLAKLLKTTDSAVREQRKKLGVRPVFKRVDTCAGEFS 533 L+SL A L LKQKGFSDRRLA L+KTT AVRE+R VRPV+KRVDTCA EF+ Sbjct: 480 ARTLDSLSAAELRLLKQKGFSDRRLATLMKTTAQAVREKRIAEKVRPVYKRVDTCAAEFA 539 Query: 534 TNTAYMYSTYDE---ECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYE 590 TNTAY+YSTY+ ECE++PT++KKIMVLGGGPNRIGQGIEFDYCCVHAALA+R+DGYE Sbjct: 540 TNTAYLYSTYEAEHGECEADPTERKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYE 599 Query: 591 TIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLE 650 TIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLE Sbjct: 600 TIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLE 659 Query: 651 ANGVPIVGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVR 710 ANGVPI+GT+PDMIDAAEDRERFQKLL DLGLRQPPNRTAR E +AL+LA EIGYPLVVR Sbjct: 660 ANGVPIIGTTPDMIDAAEDRERFQKLLHDLGLRQPPNRTARAEDEALKLADEIGYPLVVR 719 Query: 711 PSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFI 770 PSYVLGGRAMEIVHE RDLERYMREAVKVS+DSPVLLDRFLNDAIE DVDCLSDG+R FI Sbjct: 720 PSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAIECDVDCLSDGKRVFI 779 Query: 771 GGVMEHIEQAGVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQS 830 GGVMEHIEQAGVHSGDSACSLPPYSLS+ T++ELKRQTA MA+ LNV+GLMNVQFAIQQ Sbjct: 780 GGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMARALNVIGLMNVQFAIQQK 839 Query: 831 EVDGKTVDTVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPY 890 + D V+VLEVNPRASRTVP+VSKATG+ LAK+AARCM GQSLD QGI +EVVP Y Sbjct: 840 GGE----DIVYVLEVNPRASRTVPYVSKATGISLAKVAARCMAGQSLDEQGIHDEVVPSY 895 Query: 891 YSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFL 950 YSVKEAVFPF KFPGVD +LGPEM+STGEVMGVG+TFGEA KSQ+ AG +LP+ G V + Sbjct: 896 YSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGRTFGEALFKSQLAAGSRLPEKGTVLM 955 Query: 951 SVKNSDKPRTVQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKN 1010 +VK+SDKPR ++VAR L LG+ IVAT+GTA+AI AAGIPV VNKV +GRPHIVDM+KN Sbjct: 956 TVKDSDKPRAIEVARTLHTLGYPIVATRGTASAIEAAGIPVRVVNKVKDGRPHIVDMIKN 1015 Query: 1011 NEIALVVNTVEEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLEALDVYDLQ 1070 E+ALV TV+E R AIADS +IRT+ALA RVT +TTIAGA AAVEG++HL+ LDVYDLQ Sbjct: 1016 GELALVFTTVDETRAAIADSRSIRTAALANRVTYYTTIAGARAAVEGLKHLQNLDVYDLQ 1075 Query: 1071 GLHKAI 1076 GLH ++ Sbjct: 1076 GLHASL 1081 >NMB1855 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) Nme Neisseria meningitidis MC58 Length = 1071 Score = 1617 bits (4188), Expect = 0.0, Method: Compositional matrix adjust. Identities = 776/1073 (72%), Positives = 897/1073 (83%), Gaps = 9/1073 (0%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTD+KSILIIGAGPI+IGQACEFDYSGAQACKALREEG+KVILVNSNPATIMTDPEM Sbjct: 1 MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEM 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 AD TYIEPI WQ VE+IIAKE+PDAILPTMGGQTALNCALDL R+GVL KY VELIGAT Sbjct: 61 ADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATE 120 Query: 121 EAIDKAEDRSKFKEAMTKIGLGSARSGVSHTMEESWAVQKTIGFPVIIRPSFTMGGTGGG 180 +AIDKAEDR +FKEAM KIGL +S V HTM E+ A Q+ +GFP +IRPSFTMGG+GGG Sbjct: 121 DAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLIRPSFTMGGSGGG 180 Query: 181 IAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM 240 IAYN +EF IC+RG +ASPT ELLIE+S++GWKEYEMEVVRDK DNCII+CSIEN DPM Sbjct: 181 IAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPM 240 Query: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM 300 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQF+VNPA+G MIVIEM Sbjct: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPANGEMIVIEM 300 Query: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP 360 NPRVSRSSALASKATGFPIAK+AAKLAVGFTLDELRN+ITGG TPASFEPSIDYVVTKIP Sbjct: 301 NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIP 360 Query: 361 RFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKTTDRELIE 420 RF FEKFP AD LTTQMKSVGEVMA+GRT QESFQKALRGLE G+ G N ++ D+ I Sbjct: 361 RFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRSEDKAEIR 420 Query: 421 KELGEPGPDRIWYVGDAFAQGFSLEEVHNLTHIDPWFLSQIKEIVDIELWLEKEVALESL 480 +EL PGP+R+ +V DAF GF+LEE+H + IDPWFL+QI++++ E + + L L Sbjct: 421 RELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGI-LSDL 479 Query: 481 DKATLFQLKQKGFSDRRLAKLLKTTDSAVREQRKKLGVRPVFKRVDTCAGEFSTNTAYMY 540 D A L +LK+KGFSD+RLA+LL ++ VRE R L + PV+KRVDTCA EF+T TAY+Y Sbjct: 480 DFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETAYLY 539 Query: 541 STYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVNCNPET 600 STY+EECES P+D+KK+M+LGGGPNRIGQGIEFDYCCVHAALA+R+ G+ETIMVNCNPET Sbjct: 540 STYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCNPET 599 Query: 601 VSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEANGVPIVGTS 660 VSTD+DTSDRLYFEP+TLEDVLEIV E P GVIV YGGQTPLKLA L NGV I+GTS Sbjct: 600 VSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLANALVENGVNIIGTS 659 Query: 661 PDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVRPSYVLGGRAM 720 D IDAAEDRERFQK+L DLGLRQPPNR A E +AL A+EIGYPLVVRPSYVLGGRAM Sbjct: 660 ADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAM 719 Query: 721 EIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVMEHIEQA 780 ++VH +L++YMREAV+VS DSPVLLD FLN+AIEVDVDC+SDG+ IGG+M+H+EQA Sbjct: 720 QVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQA 779 Query: 781 GVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQSEVDGKTVDTV 840 G+HSGDS CSLPPYSLS++ +E++RQT MA L VVGLMNVQFA+Q DG V Sbjct: 780 GIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNVQFAVQ----DG----VV 831 Query: 841 FVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPYYSVKEAVFPF 900 FVLEVNPRASRTVPFVSKATG+ LAK+ ARCM G SL QG++ EVVP +Y+VKEAVFPF Sbjct: 832 FVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPF 891 Query: 901 VKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFLSVKNSDKPRT 960 +KFPGVDTILGPEM+STGEVMGVG +FGEA+ K+Q+GAG +L +GK+FLSV+ DK R Sbjct: 892 IKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERV 951 Query: 961 VQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKNNEIALVVNTV 1020 ++ A++ LG+ I AT+GTA ++ G+ V T+NKV EGRPHI D +KN EIALVVNTV Sbjct: 952 IKTAKNFQVLGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKNGEIALVVNTV 1011 Query: 1021 EEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLEALDVYDLQGLH 1073 +++DS IR SAL RV +TT AG EA EG + + L VY +Q LH Sbjct: 1012 SSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELH 1064 >PM1505 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) Pmu Pasteurella multocida Length = 1068 Score = 1617 bits (4187), Expect = 0.0, Method: Compositional matrix adjust. Identities = 772/1076 (71%), Positives = 907/1076 (84%), Gaps = 9/1076 (0%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTDI +ILIIGAGPI+IGQACEFDYSGAQACKALREEG+KV+LVNSNPATIMTDP+M Sbjct: 1 MPKRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPDM 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 AD TYIEPI W+ VE+II KE+PDAILPTMGGQTALNCALDL ++GVL+KY VELIGA Sbjct: 61 ADVTYIEPIEWRTVEKIIEKERPDAILPTMGGQTALNCALDLSKNGVLKKYNVELIGAKE 120 Query: 121 EAIDKAEDRSKFKEAMTKIGLGSARSGVSHTMEESWAVQKTIGFPVIIRPSFTMGGTGGG 180 +AIDKAEDR +FKEAM KIGL + +S V HT+EE+WA Q +GFP +IRPSFTMGG+GGG Sbjct: 121 DAIDKAEDRGRFKEAMEKIGLSTPKSFVCHTLEEAWAAQSEVGFPTLIRPSFTMGGSGGG 180 Query: 181 IAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM 240 IAYN +EF IC+RG +ASPT ELLIE+S++GWKEYEMEVVRDKADNCIIVCSIEN DPM Sbjct: 181 IAYNKDEFYAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIVCSIENFDPM 240 Query: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM 300 GVHTGDSITVAPAQTLTDKEYQIMRNAS+AVLREIGVDTGGSNVQF++NP +G MIVIEM Sbjct: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAINPENGEMIVIEM 300 Query: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP 360 NPRVSRSSALASKATGFPIAK+AAKLAVG+TL+ELRN+ITGG PASFEPSIDYVVTK+P Sbjct: 301 NPRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPSIDYVVTKVP 360 Query: 361 RFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKTTDRELIE 420 RF FEKFPQAD LTTQMKSVGEVMA+GRTFQES QKALRGLE G+ G N + + E I Sbjct: 361 RFAFEKFPQADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNLMSEEPEKIR 420 Query: 421 KELGEPGPDRIWYVGDAFAQGFSLEEVHNLTHIDPWFLSQIKEIVDIELWLEKEVALESL 480 +ELG PGP RI YV DAF GF+L+EVH+ + IDPWFL QI+++V EL LEK L+ L Sbjct: 421 QELGNPGPIRILYVADAFGAGFTLDEVHHYSKIDPWFLIQIQDLVLEELALEKRT-LDDL 479 Query: 481 DKATLFQLKQKGFSDRRLAKLLKTTDSAVREQRKKLGVRPVFKRVDTCAGEFSTNTAYMY 540 D A L +LK+KGFSD+R+A+L K+ +SAVR +R L + PV+KRVDTCAGEF+++TAY+Y Sbjct: 480 DYAELRRLKRKGFSDKRIAQLTKSAESAVRNKRVSLNLHPVYKRVDTCAGEFTSDTAYLY 539 Query: 541 STYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVNCNPET 600 STY+EECES P+DKKKIM+LGGGPNRIGQGIEFDYCCVHA+LA+R+ G+ETIMVNCNPET Sbjct: 540 STYEEECESRPSDKKKIMILGGGPNRIGQGIEFDYCCVHASLALREAGFETIMVNCNPET 599 Query: 601 VSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEANGVPIVGTS 660 VSTD+DTSDRLYFEP+TLEDVLEI+ EKP GVIV YGGQTPLKLA DL ANGV I+GTS Sbjct: 600 VSTDFDTSDRLYFEPLTLEDVLEIIHVEKPHGVIVHYGGQTPLKLANDLHANGVNIIGTS 659 Query: 661 PDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVRPSYVLGGRAM 720 D IDAAEDRERFQ++L L L+QP NRTAR +A++LA+E+GYPLVVRPSYVLGGRAM Sbjct: 660 ADSIDAAEDRERFQQILHKLHLKQPTNRTARNAEEAVKLAEEVGYPLVVRPSYVLGGRAM 719 Query: 721 EIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVMEHIEQA 780 +IV+ +L+RYMREAV VS+DSP+LLD FLN+AIEVDVDC+ DG IGG+M+HIEQA Sbjct: 720 QIVYNVDELQRYMREAVSVSNDSPILLDHFLNNAIEVDVDCICDGAEVVIGGIMQHIEQA 779 Query: 781 GVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQSEVDGKTVDTV 840 G+HSGDSACSLPPYSLS++ +E++RQTA MA L V GLMNVQFA+Q DG + Sbjct: 780 GIHSGDSACSLPPYSLSQEVQDEIRRQTAEMAFALGVKGLMNVQFAVQ----DG----VI 831 Query: 841 FVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPYYSVKEAVFPF 900 +VLEVNPRASRTVPFVSKATG LAKIAAR M G+SL +QGI+ EV+PP+YSVKEAVFPF Sbjct: 832 YVLEVNPRASRTVPFVSKATGRPLAKIAARVMAGESLKAQGIQGEVIPPFYSVKEAVFPF 891 Query: 901 VKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFLSVKNSDKPRT 960 +KFPGVDT+LGPEM+STGEVMGVG TF EAF+K+Q+GA ++PK+GKVFLSV ++DKPR Sbjct: 892 IKFPGVDTVLGPEMRSTGEVMGVGTTFAEAFLKAQLGANERIPKTGKVFLSVNDADKPRL 951 Query: 961 VQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKNNEIALVVNTV 1020 + +AR L G+ + AT GTA + G+ V +NKV EGRP+IVD +KN EIA+V+NTV Sbjct: 952 LPIARQLQESGYGLCATLGTAKFLREHGVAVQIINKVREGRPNIVDAIKNGEIAMVINTV 1011 Query: 1021 EEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLEALDVYDLQGLHKAI 1076 + D AIR SAL +V TT+AGAEA + +L +VY LQ LH+ + Sbjct: 1012 SGLAETVTDGHAIRRSALQQKVFLQTTLAGAEALAGSVEYLADSEVYSLQDLHQRL 1067 >NMA0602 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) NmA Neisseria meningitidis Z2491 Length = 1071 Score = 1615 bits (4183), Expect = 0.0, Method: Compositional matrix adjust. Identities = 776/1073 (72%), Positives = 896/1073 (83%), Gaps = 9/1073 (0%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTD+KSILIIGAGPI+IGQACEFDYSGAQACKALREEG+KVILVNSNPATIMTDPEM Sbjct: 1 MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEM 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 AD TYIEPI WQ VE+IIAKE+PDAILPTMGGQTALNCALDL R+GVL KY VELIGAT Sbjct: 61 ADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATE 120 Query: 121 EAIDKAEDRSKFKEAMTKIGLGSARSGVSHTMEESWAVQKTIGFPVIIRPSFTMGGTGGG 180 +AIDKAEDR +FKEAM KIGL +S V HTM E+ A Q+ +GFP +IRPSFTMGG+GGG Sbjct: 121 DAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLIRPSFTMGGSGGG 180 Query: 181 IAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM 240 IAYN +EF IC+RG +ASPT ELLIE+S++GWKEYEMEVVRDK DNCII+CSIEN DPM Sbjct: 181 IAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPM 240 Query: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM 300 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQF+VNP +G MIVIEM Sbjct: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEM 300 Query: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP 360 NPRVSRSSALASKATGFPIAK+AAKLAVGFTLDELRN+ITGG TPASFEPSIDYVVTKIP Sbjct: 301 NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIP 360 Query: 361 RFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKTTDRELIE 420 RF FEKFP AD LTTQMKSVGEVMA+GRT QESFQKALRGLE G+ G N +++D+ I Sbjct: 361 RFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRSSDKAEIR 420 Query: 421 KELGEPGPDRIWYVGDAFAQGFSLEEVHNLTHIDPWFLSQIKEIVDIELWLEKEVALESL 480 +EL PGP+R+ +V DAF GF+LEE+H + IDPWFL+QI++++ E + V L L Sbjct: 421 RELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAVSDGV-LSDL 479 Query: 481 DKATLFQLKQKGFSDRRLAKLLKTTDSAVREQRKKLGVRPVFKRVDTCAGEFSTNTAYMY 540 D A L +LK+KGFSD+R+A+LL + VRE R L + PV+KRVDTCA EF+T TAY+Y Sbjct: 480 DYAALRRLKRKGFSDKRIAQLLDVKEKEVREHRYVLNLHPVYKRVDTCAAEFATETAYLY 539 Query: 541 STYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVNCNPET 600 STY+EECE+ P+D+KK+M+LGGGPNRIGQGIEFDYCCVHAALA+R+ G+ETIMVNCNPET Sbjct: 540 STYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCNPET 599 Query: 601 VSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEANGVPIVGTS 660 VSTD+DTSDRLYFEP+TLEDVLEIV E P GVIV YGGQTPLKLA L NGV I+GTS Sbjct: 600 VSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLANALVENGVNIIGTS 659 Query: 661 PDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVRPSYVLGGRAM 720 D IDAAEDRERFQK+L DLGLRQPPNR A E +AL A+EIGYPLVVRPSYVLGGRAM Sbjct: 660 ADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAM 719 Query: 721 EIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVMEHIEQA 780 +IVH L++YMREAV+VS DSPVLLD FLN+AIEVDVDC+SDG+ IGG+M+H+EQA Sbjct: 720 QIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQA 779 Query: 781 GVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQSEVDGKTVDTV 840 G+HSGDS CSLPPYSLS++ +E++RQT MA L VVGLMNVQFA+Q DG V Sbjct: 780 GIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNVQFAVQ----DG----VV 831 Query: 841 FVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPYYSVKEAVFPF 900 FVLEVNPRASRTVPFVSKATG+ LAK+ ARCM G SL QG++ EVVP +Y+VKEAVFPF Sbjct: 832 FVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPF 891 Query: 901 VKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFLSVKNSDKPRT 960 +KFPGVDTILGPEM+STGEVMGVG +FGEA+ K+Q+GAG +L +GK+FLSV+ DK R Sbjct: 892 IKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERV 951 Query: 961 VQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKNNEIALVVNTV 1020 ++ A++ ALG+ I AT+GTA ++ G+ V T+NKV EGRPHI D +KN EIALVVNTV Sbjct: 952 IKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKNGEIALVVNTV 1011 Query: 1021 EEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLEALDVYDLQGLH 1073 +++DS IR SAL RV +TT AG EA EG + + L VY +Q LH Sbjct: 1012 SSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELH 1064 >PA4756 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) Pae Pseudomonas aeruginosa Length = 1073 Score = 1576 bits (4081), Expect = 0.0, Method: Compositional matrix adjust. Identities = 767/1081 (70%), Positives = 885/1081 (81%), Gaps = 15/1081 (1%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTDIKSILI+GAGPI+IGQACEFDYSGAQACKALREEG++VILVNSNPATIMTDP M Sbjct: 1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 ADATYIEPI W V +II KE+PDA+LPTMGGQTALNCALDL RHGVLEK+ VE+IGA Sbjct: 61 ADATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANA 120 Query: 121 EAIDKAEDRSKFKEAMTKIGLGSARSGVSHTMEESWAVQKTIGFPVIIRPSFTMGGTGGG 180 + IDKAEDRS+F +AM IGL RSG++H+MEE++ V + +GFP IIRPSFTMGGTGGG Sbjct: 121 DTIDKAEDRSRFDKAMKDIGLACPRSGIAHSMEEAYGVLEQVGFPCIIRPSFTMGGTGGG 180 Query: 181 IAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM 240 IAYN EEFE IC RGL+ SPT+ELLI+ESLIGWKEYEMEVVRDK DNCIIVCSIEN DPM Sbjct: 181 IAYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPM 240 Query: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM 300 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGV+TGGSNVQF + P GRM+VIEM Sbjct: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM 300 Query: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP 360 NPRVSRSSALASKATGFPIAKIAAKLAVG+TLDEL+N+ITGG TPASFEP+IDYVVTKIP Sbjct: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKIP 360 Query: 361 RFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEK--TTDRE- 417 RF FEKFP+AD LTTQMKSVGEVMAIGRTFQES QKALRGLEVG G + K D E Sbjct: 361 RFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGATGFDPKLDLNDPEA 420 Query: 418 --LIEKELGEPGPDRIWYVGDAFAQGFSLEEVHNLTHIDPWFLSQIKEIVDIELWLEKEV 475 ++++EL P +R+WYV DAF G S+EEV LT ID WFL QI+++V E + K + Sbjct: 421 DSILKRELTVPSAERVWYVADAFRAGKSVEEVFELTRIDEWFLVQIEDLVKDEEKV-KTL 479 Query: 476 ALESLDKATLFQLKQKGFSDRRLAKLLKTTDSAVREQRKKLGVRPVFKRVDTCAGEFSTN 535 L S+D+ +++LK+KGFSD RLAKLL T+ +R R KL V PV+KRVDTCA EF+T+ Sbjct: 480 GLSSIDRELMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATD 539 Query: 536 TAYMYSTYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVN 595 TAYMYSTY+EECE+NP+ ++KIM+LGGGPNRIGQGIEFDYCCVHAALAMR+DGYETIMVN Sbjct: 540 TAYMYSTYEEECEANPSSREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVN 599 Query: 596 CNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEANGVP 655 CNPETVSTDYDTSDRLYFEPVTLEDVLEIV E+P GVIVQYGGQTPLKL LE GVP Sbjct: 600 CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLCRALEEAGVP 659 Query: 656 IVGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVRPSYVL 715 I+GTSPD ID AEDRERFQ+++Q L LRQP N TAR+E +AL ++ IGYPLVVRPSYVL Sbjct: 660 IIGTSPDAIDRAEDRERFQQMVQRLNLRQPANATARSEDEALAASKAIGYPLVVRPSYVL 719 Query: 716 GGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVME 775 GGRAMEIV+++ +L+RYMREAV+VS+DSPVLLD FLN AIEVD+D + DGE IG +M+ Sbjct: 720 GGRAMEIVYQEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDIDAVCDGEIVVIGAIMQ 779 Query: 776 HIEQAGVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQSEVDGK 835 HIEQAGVHSGDSACSLPPYSL + +E++ Q MA L VVGLMNVQ A+Q + Sbjct: 780 HIEQAGVHSGDSACSLPPYSLPQHIQDEIREQVKKMALELGVVGLMNVQMAVQGED---- 835 Query: 836 TVDTVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPYYSVKE 895 +FV+EVNPRASRTVPFVSK G LAK+AAR M G++L G E++PP++SVKE Sbjct: 836 ----IFVIEVNPRASRTVPFVSKCVGESLAKVAARVMAGKTLAEVGFTQEIIPPFFSVKE 891 Query: 896 AVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFLSVKNS 955 AVFPF KFPGVD ILGPEMKSTGEVMGVG +F EAF K+Q+GA LP +G F+SV+ Sbjct: 892 AVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTAGCAFISVRED 951 Query: 956 DKPRTVQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKNNEIAL 1015 DKP QVA DLVALGF +VAT GTA I AAG+PV VNKV EGRPH+VDM+KN+E+ L Sbjct: 952 DKPFAAQVAGDLVALGFEVVATAGTARVIEAAGLPVRRVNKVTEGRPHVVDMIKNDEVTL 1011 Query: 1016 VVNTVEEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLEALDVYDLQGLHKA 1075 ++NT E R +IADS +IR +AL ++ TTIAG +A E ++ V LQ LH Sbjct: 1012 IINTT-EGRQSIADSYSIRRNALQHKICCTTTIAGGQAICEALKFGPEKTVRRLQDLHAG 1070 Query: 1076 I 1076 I Sbjct: 1071 I 1071