BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1111.p (1346 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value STM3616 [R] COG0457 FOG Sty Salmonella typhimurium LT2 170 3e-41 ZyhjLm [R] COG0457 FOG EcZ Escherichia coli O157:H7 EDL933 156 4e-37 yhjL [R] COG0457 FOG Eco Escherichia coli K12 155 5e-37 ECs4410 [R] COG0457 FOG Ecs Escherichia coli O157:H7 155 6e-37 aq_1403 Non COG 106 3e-22 >STM3616 [R] COG0457 FOG Sty Salmonella typhimurium LT2 Length = 1180 Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 202/747 (27%), Positives = 322/747 (43%), Gaps = 104/747 (13%) Query: 671 TMDAATKKRYDDL-RFLYRVR---QAERLRQGGDLAAAYDTLAPALVQRPTDIGAISALA 726 ++ A+ ++ DD+ R L R QAE L G A A + L P + L+ Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLS 525 Query: 727 RMFNAAGDNARALALYKPLVQRNPRDA------GVLLGAAD----------TAVQAQENS 770 R AG +A+A A + L Q+ P D G+ L +D T +Q NS Sbjct: 526 RDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNS 585 Query: 771 YALDLLDQFRKLDSSDPTTLTEAARIYRSLGKIGEATTLLRK-------AVAIENRARQR 823 +L + + + E+A R GK EA LLR+ A+ + + A+QR Sbjct: 586 NIQELAGRLQS------NQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLADWAQQR 639 Query: 824 SQLAQGNGFDPAINPFRTQRRLPGNEDVAAIPPPAETLLQPVAMAAAGSAETLPAPAQRG 883 G+ R PGN D A+ E + AAA + +Q Sbjct: 640 -----GDNAAARAAYDAVLAREPGNVD--AMLGRVEIDIAQGDNAAARAQLAALPASQIT 692 Query: 884 NAQLQPAAAPGIAYGQPLGPVFSTAAT----APTAPATP-AMQAA-----PRGYAQQAAA 933 + +Q A +A Q LG + + A T P A A P +M++A + Q Sbjct: 693 SINMQRRVA--LAQLQ-LGDITAAARTFNRITPQAKAQPPSMESAMVLRDAAAFQAQTGE 749 Query: 934 PQTALPGAANNAQRALLALQGQPGSLPADNLTPAQRALNDILQARSAYVTQGVVVRGNAS 993 PQ AL + A++A P P DN T + ND + ++ +GV R +A+ Sbjct: 750 PQRAL----ETYKDAMVAAAITP-VRPQDNDTFTRLTRND---EKDDWLKRGV--RSDAA 799 Query: 994 E------------------SGLSRMNDIEAP---LEVNMPVGNDRVAVRITPVSLDAGTL 1032 E SG +D++A L+V+ P + R R V++D G Sbjct: 800 ELYRQQDLNVTLAHDYWGSSGTGGYSDLKAHTTMLQVDAPWSDGRAFFRTDMVNMDVGRF 859 Query: 1033 ATEPASRFGGGGASA-----QGVGKQSAHGVGVAVGYERPEDGMKADIGSTPFGFKYPNV 1087 +T+ ++ + G Q+ G VAVG++ + + DIG+TP GF +V Sbjct: 860 STDADGKYDNNWGTCTLEKCSGHRSQADTGASVAVGWQ--NETWRWDIGTTPMGFNVVDV 917 Query: 1088 VGGVSVEQPFAGSSTNRFAVALSRRAVNDSVTSFAGSTD--PRIGRSWGGVTANGGRAEM 1145 VGGVS + + RR ++ S+ +F G D G WGGV ANGG + Sbjct: 918 VGGVSYSDDIGPLG---YTLNAHRRPISSSLLAFGGQKDASSNTGTKWGGVRANGGGVSL 974 Query: 1146 SSDDAQ-TGVYAYGALHSLQGHNVESNTRMELGGGAYQYLQNSDDQKMTVGVSTNVISYA 1204 S D + GV+A + L G NVE N R+ G Y + N +++++TVG++ + Y Sbjct: 975 SYDKGEANGVWASLSGDQLSGKNVEDNWRVRWMTGYYYKVINENNRRVTVGLNNMIWHYD 1034 Query: 1205 NNQNFYTYGQGGYFSPQTYLGLGVPFTWAKRNDRFSFQLKGSMGVQYFRQDGADYFPTDA 1264 + + Y+ GQGGY+SPQ YL VP W +R + +S++L GS+ + R +P Sbjct: 1035 KDLSGYSLGQGGYYSPQEYLSFAVPVMWRQRTENWSWELGGSVSWSHSRNRTMPRYPLMN 1094 Query: 1265 ALQA-----ASGKTYAAQTKTGLGYSLEGSGEYRFAPRLFLGGSLRLNNSSDFRELNVGM 1319 + A A +T + G GY+ E R F+G ++ + + D+ ++ + Sbjct: 1095 LIPADYQEDARDQTNGGGSSQGFGYTARALIERRVTANWFVGTAVDIQQAKDYTPSHLLL 1154 Query: 1320 YLRYTLEDMQGRFLTLPVSPYRSPYSN 1346 Y+RY+ QG + LP P PY++ Sbjct: 1155 YVRYSAAGWQGD-MDLPPQPL-VPYAD 1179 Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 149/600 (24%), Positives = 265/600 (44%), Gaps = 21/600 (3%) Query: 11 GVLTALLGASAA----PVLAAGSDIEAQLVEQGQYWQSRNNNQRAAEVWQKVLQLDKAQV 66 GV ALLG S P+ A + + QL+EQ + ++ + + ++ +D Sbjct: 26 GVSRALLGLSLGMALTPLAGAATSAQQQLLEQVRLGEATHREDLVRQSLYRLELIDPNDP 85 Query: 67 DALYGMGLIGVKQNKPQQANDYLERLQAISPQPWQARQLMQDIALARQENQALLAEARRL 126 + ++Q A L+RL ++P+ + + L+ + + L EAR L Sbjct: 86 QVIAARFRYLLRQGDSDGAQKLLDRLAQLAPESTAYQSSRTAMLLSTPQGRQSLQEARLL 145 Query: 127 VDAGERDRATEVFRKMFNGLTPSGAIGREYYNNLAFNDASWPEARKGMERLIRENPQDSI 186 G ++A + K+F G P G + EY+ +A A EA ++++ +P ++ Sbjct: 146 ATTGHTEQAIASYDKLFKGYPPEGELAVEYWTTVAKLPARRHEAINQLQKINAVSPGNNA 205 Query: 187 LSLFYAKQLARHEDTRVEGIRLLARLSKQVDIAGDADESWRLALTWLGPPTPAQYGLFED 246 L A QL R EG +L +++K A W + L P + A +D Sbjct: 206 LQNALA-QLLFASGRRDEGFAVLKQMAKSSTGRSAASAIWYQQIKDL-PVSDASVKALQD 263 Query: 247 FLKSHPDDKDI---REQLAKGRAQVAGAQQPTVVSR--GLQALEKGDLQEAEKAFQERLA 301 +L + + R QL++ + Q+A P +R G+ A+ G+ +A Q+ ++ Sbjct: 264 YLTQFSEGDSVSAARAQLSEQQKQLA---DPAFRARSQGIAAVNAGEGGKAIAQLQQAVS 320 Query: 302 THPDDTDALGGMG-VIRQQQNR---LAEAEPLLARAAAKGS-SAWKKALDSVRYWLLIQR 356 DD++A+G +G Q+ +R +A+ E LA A S W+ L RYWLLIQ+ Sbjct: 321 ARQDDSEAVGALGQAYSQRGDRARAVAQFEKALAMAPHSSSRDKWESLLKVNRYWLLIQQ 380 Query: 357 ARDLQARGQGAQAQDALAQALRLDPGNADGLVAIADIQVSAGQFDTAIGHYRQVLAAHPD 416 AQA+ QA +D ++ ++ + D+ ++ A +Y+Q L Sbjct: 381 GDAALKANNLAQAERFYQQARAVDNTDSYAVLGLGDVAMARKDNAAAERYYQQTLRMDSG 440 Query: 417 HVGAIRGLVNVLAQTGKAAEALRLLDKLTPQQQAEFGDQGR-LRALRASQQANLAEQRGD 475 + A+RGL N+ Q +A + L+ Q+ D R L R +QQA E G Sbjct: 441 NTNAVRGLANLYRQQ-SPQKAAAFIASLSASQRRSIDDIERSLENDRLAQQAETLESEGK 499 Query: 476 LTAALDAMREAVRNDPDNVWTTFDLARLYIKADQSRQARITIDDFTRAHRDNVDALYASA 535 A + R + DP +VW T+ L+R +A Q QA + + ++ + +YA Sbjct: 500 WAQAAELHRRRLALDPGSVWVTYRLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYG 559 Query: 536 LLSVEMEQWQDALDTLRRIPAARRTAAMDELTKQVTLTIQVNHATELVKTGQPQEALALL 595 L ++ + AL L +P ++ + + EL ++ + A L +G+ +EA ALL Sbjct: 560 LYLSGSDRDRAALAHLNTLPTSQWNSNIQELAGRLQSNQVLESANRLRDSGKEREAEALL 619 >ZyhjLm [R] COG0457 FOG EcZ Escherichia coli O157:H7 EDL933 Length = 1154 Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 105/371 (28%), Positives = 175/371 (47%), Gaps = 22/371 (5%) Query: 990 GNASESGLSRMNDIEAPLEVNMPVGNDRVAVRITPVSLDAGTLATEPASRFGGGGASA-- 1047 G++ G S + L+V+ P + R+ R V+++ G+ +T ++ + Sbjct: 791 GSSGTGGYSDLKAHTTMLQVDAPYSDGRMFFRSDFVNMNVGSFSTNADGKWDDNWGTCTL 850 Query: 1048 ---QGVGKQSAHGVGVAVGYERPEDGMKADIGSTPFGFKYPNVVGGVSVEQPFAGSSTNR 1104 G QS G VAVG+ D DIG+TP GF +VVGG+S Sbjct: 851 RDCSGNRSQSDSGASVAVGWR--NDVWSWDIGTTPMGFNVVDVVGGISYSDDIGPLG--- 905 Query: 1105 FAVALSRRAVNDSVTSFAGSTD--PRIGRSWGGVTANGGRAEMSSDDAQ-TGVYAYGALH 1161 + V RR ++ S+ +F G D G+ WGGV A+G +S D + GV+A + Sbjct: 906 YTVNAHRRPISSSLLAFGGQKDFPSNTGKKWGGVRADGVGLSLSYDKGEANGVWASLSGD 965 Query: 1162 SLQGHNVESNTRMELGGGAYQYLQNSDDQKMTVGVSTNVISYANNQNFYTYGQGGYFSPQ 1221 L G NVE N R+ G Y + N +++++T+G++ + Y + + Y+ GQGGY+SPQ Sbjct: 966 QLTGKNVEDNWRVRWMTGYYYKVINQNNRRVTIGLNNMIWHYDKDLSGYSLGQGGYYSPQ 1025 Query: 1222 TYLGLGVPFTWAKRNDRFSFQLKGSMGVQYFRQDG------ADYFPTDAALQAASGKTYA 1275 YL +P W +R + +S++L S + R + PTD +AA Sbjct: 1026 EYLSFAIPVMWRERTENWSWELGASGSWSHSRTKTMPRYPLMNLIPTDWQEEAARQSNDG 1085 Query: 1276 AQTKTGLGYSLEGSGEYRFAPRLFLGGSLRLNNSSDFRELNVGMYLRYTLEDMQGRFLTL 1335 ++ G GY+ E R F+G ++ + + D+ + +Y+RY+ QG + L Sbjct: 1086 GSSQ-GFGYTARALLERRVTSNWFVGTAIDIQQAKDYAPSHFLLYVRYSAAGWQGD-MDL 1143 Query: 1336 PVSPYRSPYSN 1346 P P PY++ Sbjct: 1144 PPQPL-IPYAD 1153 Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 197/815 (24%), Positives = 344/815 (42%), Gaps = 65/815 (7%) Query: 8 LAIGVLTALLGASAAPVLAAGSDIEAQLVEQGQYWQSRNNNQRAAEVWQKVLQLDKAQVD 67 + + T LG + P++ A + QL+EQ + ++ + + ++ +D D Sbjct: 4 FTLNIFTLSLGLAVMPMVEAAPTAQQQLLEQVRLGEATHREDLVQQSLYRLELIDPNNPD 63 Query: 68 ALYGMGLIGVKQNKPQQANDYLERLQAISPQPWQARQLMQDIALARQENQALLAEARRLV 127 + ++Q A L+RL ++P + + L+ + + L +AR Sbjct: 64 VVAARFRSLLRQGDIDGAQKQLDRLSQLAPSSNAYKSSRTTMLLSTPDGRQALQQARLQA 123 Query: 128 DAGERDRATEVFRKMFNGLTPSGAIGREYYNNLAFNDASWPEARKGMERLIRENP----- 182 G A E ++FNG P G I EY++ +A A EA ++R+ + P Sbjct: 124 TTGH---AEESCGELFNGAPPEGDIAVEYWSTVAKIPARRGEAINQLKRINADEPGNTGL 180 Query: 183 QDSILSLFYAKQLARHEDTRVEGIRLLARLSKQVDIAGDADESWRLALTWLGPPTPAQYG 242 Q+++ L ++ D R EG +L +++K A + W + + P + A Sbjct: 181 QNNLALLLFSS------DRRDEGFAVLEQMAKSNAGREGASKIWYGQIKDM-PVSDASVS 233 Query: 243 LFEDFLKSHPDDKDI---REQLAKGRAQVAGAQQPTVVSR--GLQALEKGDLQEAEKAFQ 297 + +L D + + QLA+ + Q+A P +R GL A++ G +A Q Sbjct: 234 ALKKYLSIFSDGDSVAAAQSQLAEQQKQLA---DPAFRARAQGLAAVDSGMAGKAIPELQ 290 Query: 298 ERLATHPDDTDALGGMGVIRQQQNRLAEAEPLLARAAA-----KGSSAWKKALDSVRYWL 352 + + +P D++ALG +G Q+ A A L +A A + W L RYWL Sbjct: 291 QAVRANPKDSEALGALGQAYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWL 350 Query: 353 LIQRARDLQARGQGAQAQDALAQALRLDPGNADGLVAIADIQVSAGQFDTAIGHYRQVLA 412 IQ+ +A+ QA +D ++ ++ + D+ ++ + A +Y+Q L Sbjct: 351 AIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLR 410 Query: 413 AHPDHVGAIRGLVNVL-AQTGKAAEALRLLDKLTPQQQAEFGDQGR-LRALRASQQANLA 470 + A+RGL N+ Q+ + AEA + L+ Q+ D R L+ R +QQA Sbjct: 411 MDSGNTNAVRGLANIYRQQSPEKAEA--FIASLSASQRRSIDDIERSLQNDRLAQQAEAL 468 Query: 471 EQRGDLTAALDAMREAVRNDPDNVWTTFDLARLYIKADQSRQARITIDDFTRAHRDNVDA 530 E +G A R+ + DP +VW T+ L++ +A Q QA + + + ++ + Sbjct: 469 ENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQ 528 Query: 531 LYASALLSVEMEQWQDALDTLRRIPAARRTAAMDELTKQVTLTIQVNHATELVKTGQPQE 590 +YA L +Q + AL + +P A+ ++ + EL ++ + A L ++G+ E Sbjct: 529 VYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQVLETANRLRESGKEAE 588 Query: 591 ALALLDRVQDQASGNAERTGTLASAYVDAGDTPRAMAMMQPLVTPPAMPTLATR-LQYAA 649 A A+L Q + TLA + D A A Q ++T PT A L Sbjct: 589 AEAML----RQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTRE--PTNADAILGLTE 642 Query: 650 ILLKAGEDAQVYNVLTALQKQTMDAATKKRYDDLRFLYRVRQAERLRQGGDLAAA---YD 706 + + AG+ A + L L + +R RV A+ Q GD AAA ++ Sbjct: 643 VDIAAGDTAAARSQLAKLPATDNASLNTQR--------RVALAQ--AQLGDTAAAQQTFN 692 Query: 707 TLAPALVQRPTDIGAISAL---ARMFNAAGDNARALALYKPLVQRNPRDAGVLLGAADTA 763 L P +P + + L A+ AGD +AL YK DA V G T Sbjct: 693 KLIPQAKSQPPSMESAMVLRDGAKFEAQAGDPKQALETYK--------DAMVASGV--TT 742 Query: 764 VQAQENSYALDLLDQFRKLDSSDPTTLTEAARIYR 798 + Q+N L K D ++AA +YR Sbjct: 743 TRPQDNDTFTRLTRNDEKDDWLKRGVRSDAADLYR 777 >yhjL [R] COG0457 FOG Eco Escherichia coli K12 Length = 1166 Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 105/371 (28%), Positives = 175/371 (47%), Gaps = 22/371 (5%) Query: 990 GNASESGLSRMNDIEAPLEVNMPVGNDRVAVRITPVSLDAGTLATEPASRFGGGGASA-- 1047 G++ G S + L+V+ P + R+ R V+++ G+ +T ++ + Sbjct: 803 GSSGTGGYSDLKAHTTMLQVDAPYSDGRMFFRSDFVNMNVGSFSTNADGKWDDNWGTCTL 862 Query: 1048 ---QGVGKQSAHGVGVAVGYERPEDGMKADIGSTPFGFKYPNVVGGVSVEQPFAGSSTNR 1104 G QS G VAVG+ D DIG+TP GF +VVGG+S Sbjct: 863 QDCSGNRSQSDSGASVAVGWR--NDVWSWDIGTTPMGFNVVDVVGGISYSDDIGPLG--- 917 Query: 1105 FAVALSRRAVNDSVTSFAGSTDP--RIGRSWGGVTANGGRAEMSSDDAQ-TGVYAYGALH 1161 + V RR ++ S+ +F G D G+ WGGV A+G +S D + GV+A + Sbjct: 918 YTVNAHRRPISSSLLAFGGQKDSPSNTGKKWGGVRADGVGLSLSYDKGEANGVWASLSGD 977 Query: 1162 SLQGHNVESNTRMELGGGAYQYLQNSDDQKMTVGVSTNVISYANNQNFYTYGQGGYFSPQ 1221 L G NVE N R+ G Y + N +++++T+G++ + Y + + Y+ GQGGY+SPQ Sbjct: 978 QLTGKNVEDNWRVRWMTGYYYKVINQNNRRVTIGLNNMIWHYDKDLSGYSLGQGGYYSPQ 1037 Query: 1222 TYLGLGVPFTWAKRNDRFSFQLKGSMGVQYFRQDG------ADYFPTDAALQAASGKTYA 1275 YL +P W +R + +S++L S + R + PTD +AA Sbjct: 1038 EYLSFAIPVMWRERTENWSWELGASGSWSHSRTKTMPRYPLMNLIPTDWQEEAARQSNDG 1097 Query: 1276 AQTKTGLGYSLEGSGEYRFAPRLFLGGSLRLNNSSDFRELNVGMYLRYTLEDMQGRFLTL 1335 ++ G GY+ E R F+G ++ + + D+ + +Y+RY+ QG + L Sbjct: 1098 GSSQ-GFGYTARALLERRVTSNWFVGTAIDIQQAKDYAPSHFLLYVRYSAAGWQGD-MDL 1155 Query: 1336 PVSPYRSPYSN 1346 P P PY++ Sbjct: 1156 PPQPL-IPYAD 1165 Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 142/596 (23%), Positives = 264/596 (44%), Gaps = 29/596 (4%) Query: 17 LGASAAPVLAAGSDIEAQLVEQGQYWQSRNNNQRAAEVWQKVLQLDKAQVDALYGMGLIG 76 LG + P++ A + QL+EQ + ++ + + ++ +D D + Sbjct: 22 LGLAVMPMVEAAPTAQQQLLEQVRLGEATHREDLVQQSLYRLELIDPNNPDVVAARFRSL 81 Query: 77 VKQNKPQQANDYLERLQAISPQPWQARQLMQDIALARQENQALLAEARRLVDAGERDRAT 136 ++Q A L+RL ++P + + L+ + + L +AR G + A Sbjct: 82 LRQGDIDGAQKQLDRLSQLAPSSNAYKSSRTTMLLSTPDGRQALQQARLQATTGHAEEAV 141 Query: 137 EVFRKMFNGLTPSGAIGREYYNNLAFNDASWPEARKGMERLIRENP-----QDSILSLFY 191 + K+FNG P G I EY++ +A A EA ++R+ + P Q+++ L + Sbjct: 142 ASYNKLFNGAPPEGDIAVEYWSTVAKIPARRGEAINQLKRINADAPGNTGLQNNLALLLF 201 Query: 192 AKQLARHEDTRVEGIRLLARLSKQVDIAGDADESWRLALTWLGPPTPAQYGLFEDFLKSH 251 + D R EG +L +++K A + W + + P + A + +L Sbjct: 202 SS------DRRDEGFAVLEQMAKSNAGREGASKIWYGQIKDM-PVSDASVSALKKYLSIF 254 Query: 252 PDDKDI---REQLAKGRAQVAGAQQPTVVSR--GLQALEKGDLQEAEKAFQERLATHPDD 306 D + + QLA+ + Q+A P +R GL A++ G +A Q+ + +P D Sbjct: 255 SDGDSVAAAQSQLAEQQKQLA---DPAFRARAQGLAAVDSGMAGKAIPELQQAVRANPKD 311 Query: 307 TDALGGMGVIRQQQNRLAEAEPLLARAAA-----KGSSAWKKALDSVRYWLLIQRARDLQ 361 ++ALG +G Q+ A A L +A A + W L RYWL IQ+ Sbjct: 312 SEALGALGQAYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAAL 371 Query: 362 ARGQGAQAQDALAQALRLDPGNADGLVAIADIQVSAGQFDTAIGHYRQVLAAHPDHVGAI 421 +A+ QA +D ++ ++ + D+ ++ + A +Y+Q L + A+ Sbjct: 372 KANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDSGNTNAV 431 Query: 422 RGLVNVL-AQTGKAAEALRLLDKLTPQQQAEFGDQGR-LRALRASQQANLAEQRGDLTAA 479 RGL N+ Q+ + AEA + L+ Q+ D R L+ R +QQA E +G A Sbjct: 432 RGLANIYRQQSPEKAEA--FIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQA 489 Query: 480 LDAMREAVRNDPDNVWTTFDLARLYIKADQSRQARITIDDFTRAHRDNVDALYASALLSV 539 R+ + DP +VW T+ L++ +A Q QA + + + ++ + +YA L Sbjct: 490 AALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDPEQVYAYGLYLS 549 Query: 540 EMEQWQDALDTLRRIPAARRTAAMDELTKQVTLTIQVNHATELVKTGQPQEALALL 595 +Q + AL + +P A+ + + EL ++ + A L ++G+ EA A+L Sbjct: 550 GHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRESGKEAEAEAML 605 >ECs4410 [R] COG0457 FOG Ecs Escherichia coli O157:H7 Length = 1002 Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 105/371 (28%), Positives = 175/371 (47%), Gaps = 22/371 (5%) Query: 990 GNASESGLSRMNDIEAPLEVNMPVGNDRVAVRITPVSLDAGTLATEPASRFGGGGASA-- 1047 G++ G S + L+V+ P + R+ R V+++ G+ +T ++ + Sbjct: 639 GSSGTGGYSDLKAHTTMLQVDAPYSDGRMFFRSDFVNMNVGSFSTNADGKWDDNWGTCTL 698 Query: 1048 ---QGVGKQSAHGVGVAVGYERPEDGMKADIGSTPFGFKYPNVVGGVSVEQPFAGSSTNR 1104 G QS G VAVG+ D DIG+TP GF +VVGG+S Sbjct: 699 RDCSGNRSQSDSGASVAVGWR--NDVWSWDIGTTPMGFNVVDVVGGISYSDDIGPLG--- 753 Query: 1105 FAVALSRRAVNDSVTSFAGSTD--PRIGRSWGGVTANGGRAEMSSDDAQ-TGVYAYGALH 1161 + V RR ++ S+ +F G D G+ WGGV A+G +S D + GV+A + Sbjct: 754 YTVNAHRRPISSSLLAFGGQKDFPSNTGKKWGGVRADGVGLSLSYDKGEANGVWASLSGD 813 Query: 1162 SLQGHNVESNTRMELGGGAYQYLQNSDDQKMTVGVSTNVISYANNQNFYTYGQGGYFSPQ 1221 L G NVE N R+ G Y + N +++++T+G++ + Y + + Y+ GQGGY+SPQ Sbjct: 814 QLTGKNVEDNWRVRWMTGYYYKVINQNNRRVTIGLNNMIWHYDKDLSGYSLGQGGYYSPQ 873 Query: 1222 TYLGLGVPFTWAKRNDRFSFQLKGSMGVQYFRQDG------ADYFPTDAALQAASGKTYA 1275 YL +P W +R + +S++L S + R + PTD +AA Sbjct: 874 EYLSFAIPVMWRERTENWSWELGASGSWSHSRTKTMPRYPLMNLIPTDWQEEAARQSNDG 933 Query: 1276 AQTKTGLGYSLEGSGEYRFAPRLFLGGSLRLNNSSDFRELNVGMYLRYTLEDMQGRFLTL 1335 ++ G GY+ E R F+G ++ + + D+ + +Y+RY+ QG + L Sbjct: 934 GSSQ-GFGYTARALLERRVTSNWFVGTAIDIQQAKDYAPSHFLLYVRYSAAGWQGD-MDL 991 Query: 1336 PVSPYRSPYSN 1346 P P PY++ Sbjct: 992 PPQPL-IPYAD 1001 Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 103/408 (25%), Positives = 186/408 (45%), Gaps = 18/408 (4%) Query: 200 DTRVEGIRLLARLSKQVDIAGDADESWRLALTWLGPPTPAQYGLFEDFLKSHPDDKDI-- 257 D R EG +L +++K A + W + + P + A + +L D + Sbjct: 40 DRRDEGFAVLEQMAKSNAGREGASKIWYGQIKDM-PVSDASVSALKKYLSIFSDGDSVAA 98 Query: 258 -REQLAKGRAQVAGAQQPTVVSR--GLQALEKGDLQEAEKAFQERLATHPDDTDALGGMG 314 + QLA+ + Q+A P +R GL A++ G +A Q+ + +P D++ALG +G Sbjct: 99 AQSQLAEQQKQLA---DPAFRARAQGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALG 155 Query: 315 VIRQQQNRLAEAEPLLARAAA-----KGSSAWKKALDSVRYWLLIQRARDLQARGQGAQA 369 Q+ A A L +A A + W L RYWL IQ+ +A Sbjct: 156 QAYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRA 215 Query: 370 QDALAQALRLDPGNADGLVAIADIQVSAGQFDTAIGHYRQVLAAHPDHVGAIRGLVNVL- 428 + QA +D ++ ++ + D+ ++ + A +Y+Q L + A+RGL N+ Sbjct: 216 ERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDSGNTNAVRGLANIYR 275 Query: 429 AQTGKAAEALRLLDKLTPQQQAEFGDQGR-LRALRASQQANLAEQRGDLTAALDAMREAV 487 Q+ + AEA + L+ Q+ D R L+ R +QQA E +G A R+ + Sbjct: 276 QQSPEKAEA--FIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRL 333 Query: 488 RNDPDNVWTTFDLARLYIKADQSRQARITIDDFTRAHRDNVDALYASALLSVEMEQWQDA 547 DP +VW T+ L++ +A Q QA + + + ++ + +YA L +Q + A Sbjct: 334 ALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAA 393 Query: 548 LDTLRRIPAARRTAAMDELTKQVTLTIQVNHATELVKTGQPQEALALL 595 L + +P A+ ++ + EL ++ + A L ++G+ EA A+L Sbjct: 394 LAHINSLPRAQWSSNIQELVNRLQSDQVLETANRLRESGKEAEAEAML 441 >aq_1403 Non COG Length = 330 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 82/294 (27%), Positives = 126/294 (42%), Gaps = 48/294 (16%) Query: 1058 VGVAVGYERPEDGMKADIGSTPFGFKYPNVVGGVSVEQPFAGSSTNRFA-------VALS 1110 VGV VG + +K IGSTPFG V F G + + L Sbjct: 65 VGVRVGRK---SYLKLGIGSTPFG--------NSKVRPTFRGIFEANYREEDILLRLTLK 113 Query: 1111 RRAVNDSVTSFAGSTDPRIGRSWGGVTANGG--RAEMSSDDAQTGVYAYGALHSLQGHNV 1168 R +V DS+ S+ G+ DP R WG V GG + ++ S ++ + G + ++G NV Sbjct: 114 RDSVRDSLLSYVGAKDPHADREWGRVVEQGGEVKFQLGSGYRESFLSLKGGYYDIEGKNV 173 Query: 1169 ESNTRMELGGGAYQYLQNSDDQKMTVGVSTNVISYANNQNFYTYGQGGYFSPQTYLGLGV 1228 N+R L YL N + +G+ +Y N+N + +G GGYFSP+ ++ LG Sbjct: 174 NDNSRYFLEIYPSLYLGNLLIDENYLGLFFRYENYDKNENLFYFGNGGYFSPKNFVLLGP 233 Query: 1229 PFTWAKRNDRFSFQLKGSMGVQYFRQDGADYFPTDAALQAASGKTYAAQTKTGLGYSLEG 1288 +T DR F+L +G F DG T L + G Sbjct: 234 KYTGYFYTDRLMFRLNLLLGFLRFETDG--------------------DTTNTLAADISG 273 Query: 1289 SGEYRFAPRLFLGGSLRLNNSSDFRELNVGMYLRYTLEDMQGRFLTLPVSPYRS 1342 EY+ ++ L G L NS D+ E+++ M ++Y ++ SP+RS Sbjct: 274 EFEYKLKEKISLIGGLGYRNSKDYDEVSLNMGVKYYFNGLE--------SPFRS 319